##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547928_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3104939 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27705053142751 31.0 31.0 33.0 30.0 34.0 2 31.647680357005402 31.0 31.0 34.0 30.0 34.0 3 31.672322709077378 31.0 31.0 34.0 30.0 34.0 4 35.524548147322704 37.0 35.0 37.0 33.0 37.0 5 35.46272277812865 37.0 35.0 37.0 33.0 37.0 6 35.537315225838576 37.0 35.0 37.0 33.0 37.0 7 35.887642559161385 37.0 35.0 37.0 35.0 37.0 8 35.89829043340304 37.0 35.0 37.0 35.0 37.0 9 37.675252557296616 39.0 37.0 39.0 35.0 39.0 10 36.955834559068634 39.0 37.0 39.0 32.0 39.0 11 36.84818220261332 39.0 37.0 39.0 32.0 39.0 12 36.43142135803634 39.0 35.0 39.0 32.0 39.0 13 36.2809588207691 39.0 35.0 39.0 32.0 39.0 14 37.3533364101517 39.0 35.0 41.0 32.0 41.0 15 37.52305600850774 40.0 35.0 41.0 32.0 41.0 16 37.59559012270451 40.0 35.0 41.0 33.0 41.0 17 37.526355912306165 39.0 35.0 41.0 32.0 41.0 18 37.40460311780682 39.0 36.0 41.0 32.0 41.0 19 37.30343398050654 39.0 36.0 41.0 32.0 41.0 20 37.12368552168014 39.0 35.0 41.0 32.0 41.0 21 37.00846232405854 39.0 35.0 41.0 32.0 41.0 22 36.920007768268555 39.0 35.0 41.0 31.0 41.0 23 36.79232506661162 38.0 35.0 41.0 31.0 41.0 24 36.75195486932272 38.0 35.0 41.0 31.0 41.0 25 36.77415369512895 38.0 35.0 41.0 31.0 41.0 26 36.665021116356876 38.0 35.0 41.0 31.0 41.0 27 36.59096040212062 38.0 35.0 41.0 31.0 41.0 28 36.52578198798753 38.0 35.0 40.0 31.0 41.0 29 36.52114357158063 38.0 35.0 40.0 31.0 41.0 30 36.42439384477441 38.0 35.0 40.0 30.0 41.0 31 36.28258332933433 38.0 35.0 40.0 30.0 41.0 32 36.08471631809836 38.0 35.0 40.0 30.0 41.0 33 35.89538055336997 38.0 35.0 40.0 29.0 41.0 34 35.68177828936414 38.0 35.0 40.0 27.0 41.0 35 35.551186351809164 38.0 35.0 40.0 27.0 41.0 36 35.43038752130074 38.0 35.0 40.0 26.0 41.0 37 35.32972499620765 38.0 34.0 40.0 26.0 41.0 38 35.227675970445794 38.0 34.0 40.0 25.0 41.0 39 35.168786568753845 38.0 34.0 40.0 25.0 41.0 40 35.02878993758009 38.0 34.0 40.0 24.0 41.0 41 34.93630019784608 38.0 34.0 40.0 24.0 41.0 42 34.913638883082726 38.0 34.0 40.0 24.0 41.0 43 34.84692774962729 38.0 34.0 40.0 24.0 41.0 44 34.67871317278697 38.0 34.0 40.0 23.0 41.0 45 34.562047756815836 38.0 34.0 40.0 23.0 41.0 46 34.507627364015846 37.0 34.0 40.0 23.0 41.0 47 34.45355705860888 37.0 33.0 40.0 23.0 41.0 48 34.33455150004557 37.0 33.0 40.0 23.0 41.0 49 34.20002872842269 37.0 33.0 40.0 23.0 41.0 50 34.112322013411536 37.0 33.0 40.0 23.0 41.0 51 33.790725679312864 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 3.0 12 7.0 13 15.0 14 26.0 15 98.0 16 208.0 17 543.0 18 1259.0 19 2585.0 20 4562.0 21 7510.0 22 11622.0 23 17957.0 24 27259.0 25 40861.0 26 53724.0 27 59267.0 28 61661.0 29 66699.0 30 76956.0 31 92159.0 32 112369.0 33 143752.0 34 228160.0 35 315911.0 36 229413.0 37 296668.0 38 461548.0 39 792006.0 40 127.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.0050087940536 24.53172187923821 28.999571328132372 14.463697998575817 2 31.733022774360464 25.382302196597102 29.576201013932963 13.308474015109475 3 27.995525838027735 24.737072129275326 33.513283191714876 13.754118840982061 4 24.503991865862744 27.43934743967595 33.59550702928463 14.461153665176674 5 22.37254902592289 32.2125491032191 31.617851429609406 13.797050441248604 6 20.67093749667868 40.4997006382412 28.28248799734874 10.54687386773138 7 87.53144586737453 2.9451786331390086 8.06627763057503 1.4570978689114344 8 88.12070059991517 2.4656523042803737 7.589102394604209 1.8245447012002491 9 83.18537014736843 4.984896643702179 9.449396590400005 2.3803366185293817 10 33.09266301205918 32.51674187480012 23.03397908944427 11.35661602369644 11 32.77797083936271 23.982500139294203 26.860237833979987 16.3792911873631 12 30.23273565116738 22.580604643118594 29.635525850910437 17.551133854803588 13 23.032272131594212 30.19376548138305 29.941425580341512 16.832536806681226 14 18.5690604549719 32.29403218549543 31.190145764538368 17.9467615949943 15 17.264300522490135 27.189455251777893 38.69380364638403 16.852440579347935 16 20.263071190770575 24.847025980220547 36.87821242220862 18.011690406800263 17 20.013629897398953 25.557635753874713 29.762613693860008 24.666120654866326 18 21.21668090741879 25.853454769964884 33.834770989059685 19.095093333556633 19 24.026333528613605 28.235949240870756 28.550126105537014 19.187591124978624 20 24.892534120638118 27.194157437553525 29.43133504394128 18.481973397867076 21 21.99730815967721 28.032434775691247 31.36615566360563 18.604101401025915 22 21.86110580594337 24.450045556450544 30.735450841385294 22.953397796220795 23 18.871063167424545 27.961483301282247 31.006985966551998 22.160467564741207 24 19.050100501169265 26.60152099606466 35.8674679277113 18.480910575054775 25 18.603199611973054 29.141538690454144 32.22253319630434 20.032728501268462 26 18.738822244172912 31.711283216836144 29.150331133719536 20.399563405271408 27 18.14354484902924 31.05130245714972 31.399006550531265 19.40614614328977 28 17.27898680135101 28.866203168564663 34.70444991028809 19.150360119796233 29 17.60153742150812 26.402257822134345 34.16160510721789 21.834599649139644 30 19.210973226849223 29.270913212787754 32.161404781221144 19.356708779141876 31 22.671137822675423 28.40013926199516 29.025948657928545 19.90277425740087 32 23.51556665042373 27.997941344419324 29.072906102181072 19.41358590297587 33 22.937197800021192 28.433827524469883 28.016363606499194 20.612611069009727 34 18.72439361932714 28.759437786056345 30.125487167380744 22.390681427235766 35 19.429624865416034 28.165770728507066 30.237566663950567 22.167037742126336 36 23.28512734066595 28.088410110472378 28.82832802834452 19.79813452051715 37 19.540158437895236 30.507974552801198 29.812824020053213 20.139042989250353 38 19.485020478663188 30.78479158527752 28.472346799727788 21.257841136331503 39 19.23425870846416 30.248967854118874 28.67093363186845 21.845839805548515 40 20.855353357988676 27.984607749137748 28.87132404211484 22.288714850758744 41 18.043832745184364 26.786774232923737 29.892857798494592 25.276535223397307 42 20.301526052524704 27.81974138622369 27.934622870207754 23.94410969104385 43 20.16081475352656 28.3649694889336 28.921405541300487 22.55281021623935 44 19.62817949080481 29.896658195217363 28.381105071629424 22.0940572423484 45 18.207893939301222 32.069325677573694 26.71533965723642 23.007440725888657 46 20.551450447174645 30.302817543275406 27.87562010074916 21.270111908800786 47 19.799036309570013 28.572123317076436 29.26511599744794 22.363724375905612 48 20.198528859987267 27.572296911469113 30.45625050926926 21.772923719274356 49 20.231798434687445 26.659621976470394 30.201817169355017 22.906762419487144 50 19.28665909378574 29.32550365723771 29.595267411050585 21.792569837925964 51 18.24663866182234 29.71942443957836 28.457338453348036 23.57659844525126 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2250.0 1 3039.5 2 3829.0 3 21016.0 4 38203.0 5 28900.5 6 19598.0 7 18635.0 8 17672.0 9 18342.0 10 19012.0 11 19507.5 12 20003.0 13 19976.0 14 19949.0 15 19102.0 16 18255.0 17 17648.0 18 17041.0 19 16841.0 20 16641.0 21 17299.0 22 17957.0 23 20104.0 24 22251.0 25 24446.0 26 30804.0 27 34967.0 28 42948.0 29 50929.0 30 62111.0 31 73293.0 32 81056.0 33 88819.0 34 100048.5 35 111278.0 36 121829.0 37 132380.0 38 143099.5 39 153819.0 40 174765.0 41 195711.0 42 217726.5 43 239742.0 44 243104.5 45 246467.0 46 244902.5 47 243338.0 48 248821.5 49 254305.0 50 249736.5 51 245168.0 52 230977.5 53 216787.0 54 188135.0 55 159483.0 56 140914.5 57 122346.0 58 104545.0 59 86744.0 60 75535.5 61 64327.0 62 55811.5 63 47296.0 64 38705.5 65 30115.0 66 24188.0 67 18261.0 68 14796.5 69 11332.0 70 9456.5 71 7581.0 72 6242.0 73 4903.0 74 3890.5 75 2138.5 76 1399.0 77 1159.5 78 920.0 79 732.5 80 545.0 81 390.0 82 235.0 83 171.5 84 108.0 85 91.0 86 74.0 87 63.0 88 52.0 89 35.0 90 18.0 91 12.5 92 7.0 93 8.0 94 9.0 95 5.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3104939.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.684666449893893 #Duplication Level Percentage of deduplicated Percentage of total 1 77.20426160088971 18.28557184527424 2 9.259028694651047 4.385940125656131 3 3.287552284573044 2.335937378900976 4 1.7205895597992447 1.630063592840595 5 1.0317221330110973 1.2217997294670453 6 0.6878988711256956 0.9775593188322388 7 0.5028863250810559 0.8337486410230404 8 0.4120123369593717 0.7806699819299209 9 0.3203468620507491 0.6828577718347947 >10 3.401958257729118 18.616166673699027 >50 1.3991758763325786 24.218672415189857 >100 0.7672878365517055 24.048636370525088 >500 0.0037511250956172295 0.6170719567013379 >1k 0.001389305590969344 0.5701819903866465 >5k 0.0 0.0 >10k+ 1.389305590969344E-4 0.7951222077390886 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24164 0.7782439526187149 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3755 0.1209363533389867 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.220675188787928E-5 0.0 0.0 0.062255651399270646 0.0 2 3.220675188787928E-5 0.0 0.0 0.19220989526686352 0.0 3 3.220675188787928E-5 0.0 0.0 0.30628621045373194 0.0 4 3.220675188787928E-5 0.0 0.0 0.5035525657669925 0.0 5 3.220675188787928E-5 0.0 0.0 0.896120664528353 0.0 6 3.220675188787928E-5 0.0 0.0 1.4348107966050219 0.0 7 3.220675188787928E-5 0.0 0.0 1.7481502857221993 0.0 8 3.220675188787928E-5 0.0 0.0 2.4404344175521646 0.0 9 3.220675188787928E-5 0.0 0.0 2.7129035385236233 0.0 10 3.220675188787928E-5 0.0 0.0 3.204571812843988 0.0 11 3.220675188787928E-5 0.0 0.0 3.74200588159703 0.0 12 3.220675188787928E-5 0.0 0.0 4.149292465971151 0.0 13 3.220675188787928E-5 0.0 0.0 4.345882479494766 0.0 14 3.220675188787928E-5 0.0 0.0 4.43467649444965 0.0 15 3.220675188787928E-5 0.0 0.0 4.558382628450993 0.0 16 3.220675188787928E-5 0.0 0.0 4.836552344506607 0.0 17 3.220675188787928E-5 0.0 0.0 5.176301370171846 0.0 18 3.220675188787928E-5 0.0 0.0 5.587162904005521 0.0 19 3.220675188787928E-5 0.0 0.0 5.81286782123578 0.0 20 3.220675188787928E-5 0.0 0.0 6.055642316966614 0.0 21 3.220675188787928E-5 0.0 0.0 6.390882397367549 0.0 22 3.220675188787928E-5 0.0 0.0 6.748087482556018 0.0 23 3.220675188787928E-5 0.0 0.0 7.162813826616239 0.0 24 3.220675188787928E-5 0.0 0.0 7.455090099998744 0.0 25 3.220675188787928E-5 0.0 0.0 7.727527014218315 0.0 26 3.220675188787928E-5 0.0 0.0 7.981573873109906 0.0 27 3.220675188787928E-5 0.0 0.0 8.246474407387714 0.0 28 3.220675188787928E-5 0.0 0.0 8.525320465232973 0.0 29 3.220675188787928E-5 0.0 0.0 8.843619794140883 0.0 30 3.220675188787928E-5 0.0 0.0 9.203787900503038 0.0 31 3.220675188787928E-5 0.0 0.0 9.534100347865127 0.0 32 3.220675188787928E-5 0.0 0.0 9.839130494995231 0.0 33 3.220675188787928E-5 0.0 0.0 10.146704975524479 0.0 34 3.220675188787928E-5 0.0 0.0 10.462524384537023 0.0 35 3.220675188787928E-5 0.0 0.0 10.823336625936935 0.0 36 3.220675188787928E-5 0.0 0.0 11.155484858156633 0.0 37 3.220675188787928E-5 0.0 0.0 11.508825133118558 0.0 38 3.220675188787928E-5 0.0 0.0 11.86200437432104 0.0 39 3.220675188787928E-5 0.0 0.0 12.286296123691963 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCTA 20 7.035143E-4 45.0 26 ATACCCG 20 7.035143E-4 45.0 33 GCGTACA 25 3.892345E-5 45.0 9 CGGTCTA 695 0.0 43.705036 31 CGTTTTT 14885 0.0 43.05005 1 CGACGGT 710 0.0 42.14789 28 GACGGTC 710 0.0 42.14789 29 TACGGGA 1315 0.0 42.091255 4 ACGGGTA 530 0.0 42.0283 5 ACGGTCT 725 0.0 41.275864 30 ACGGGAT 1270 0.0 40.74803 5 TCACGAC 745 0.0 39.865772 25 AGGGCGA 2635 0.0 39.364326 6 TCTCACG 770 0.0 39.15584 23 GGGCGAT 4645 0.0 39.09042 7 TAGGGTA 2440 0.0 38.82172 5 TAGGGCG 1120 0.0 38.772324 5 CGTTAGG 640 0.0 38.671875 2 CACGACG 765 0.0 38.52941 26 CTACGGG 725 0.0 38.48276 3 >>END_MODULE