SRR1547927_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547927_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2257419
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	51586	2.2851761237058783	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4140	0.18339528461486326	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTT	3786	0.16771365882895464	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTC	3148	0.13945129371197815	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCT	2755	0.12204203118694402	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	22135	0.0	43.27197	1
ACGGGAT	1115	0.0	40.56054	5
CGACGGT	315	0.0	39.999996	28
CGGTCTA	315	0.0	39.999996	31
CGGTTTT	1890	0.0	39.404762	1
TAGTACG	75	0.0	39.0	1
CGGTAGT	460	0.0	38.641308	12
TACGGGA	1035	0.0	38.47826	4
AGGGCGA	1600	0.0	38.390625	6
TAGGGAT	3785	0.0	38.22325	5
TAAGGGA	3330	0.0	38.10811	4
CTCACGA	325	0.0	38.076923	24
GGGCGAT	2965	0.0	38.018547	7
ATAGGGA	3770	0.0	38.01724	4
AGGGATC	2655	0.0	37.881355	6
CGAGGGA	1710	0.0	37.63158	4
TAGGGAC	2595	0.0	37.54335	5
TCGTTAG	60	1.5643309E-10	37.500004	1
CACGCCG	480	0.0	37.500004	26
TCGTAAG	120	0.0	37.500004	1