##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547927_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2257419 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.352114516622745 31.0 31.0 33.0 30.0 34.0 2 31.692362826750372 31.0 31.0 34.0 30.0 34.0 3 31.470264935308865 31.0 31.0 34.0 30.0 34.0 4 35.44910625807615 37.0 35.0 37.0 33.0 37.0 5 35.483552676751636 37.0 35.0 37.0 33.0 37.0 6 35.58517758555235 37.0 35.0 37.0 33.0 37.0 7 35.920318292705076 37.0 35.0 37.0 35.0 37.0 8 35.94330250609213 37.0 35.0 37.0 35.0 37.0 9 37.71331817442841 39.0 37.0 39.0 35.0 39.0 10 37.23049952179901 39.0 37.0 39.0 34.0 39.0 11 37.033822254530506 39.0 37.0 39.0 33.0 39.0 12 36.663078941038414 39.0 35.0 39.0 32.0 39.0 13 36.5464067592237 39.0 35.0 39.0 32.0 39.0 14 37.520366400743505 40.0 36.0 41.0 32.0 41.0 15 37.69951302793146 40.0 36.0 41.0 32.0 41.0 16 37.782063941164665 40.0 36.0 41.0 33.0 41.0 17 37.738653745715794 40.0 36.0 41.0 33.0 41.0 18 37.543883966600795 39.0 36.0 41.0 32.0 41.0 19 37.367415176358485 39.0 36.0 41.0 32.0 41.0 20 37.07910095556031 39.0 35.0 41.0 32.0 41.0 21 36.96999980951698 39.0 35.0 41.0 32.0 41.0 22 36.95046954065683 38.0 35.0 41.0 32.0 41.0 23 36.81933703933563 38.0 35.0 41.0 32.0 41.0 24 36.76792079804414 38.0 35.0 41.0 32.0 41.0 25 36.75257451097913 38.0 35.0 41.0 31.0 41.0 26 36.66902068246967 38.0 35.0 41.0 31.0 41.0 27 36.60311887159628 38.0 35.0 41.0 31.0 41.0 28 36.513323401637 38.0 35.0 40.0 31.0 41.0 29 36.45787024916508 38.0 35.0 40.0 31.0 41.0 30 36.31039474727554 38.0 35.0 40.0 30.0 41.0 31 36.05012538655872 38.0 35.0 40.0 30.0 41.0 32 35.77336728361018 38.0 35.0 40.0 29.0 41.0 33 35.4224944505207 38.0 34.0 40.0 26.0 41.0 34 35.06214708036036 38.0 34.0 40.0 24.0 41.0 35 34.805275848214265 38.0 34.0 40.0 23.0 41.0 36 34.65942432485949 38.0 34.0 40.0 22.0 41.0 37 34.53000306987759 38.0 34.0 40.0 21.0 41.0 38 34.36939930070581 38.0 34.0 40.0 20.0 41.0 39 34.256739222979874 38.0 33.0 40.0 19.0 41.0 40 34.12684619027305 38.0 33.0 40.0 18.0 41.0 41 33.974345037407765 38.0 33.0 40.0 18.0 41.0 42 33.963172100527196 38.0 33.0 40.0 18.0 41.0 43 33.91357563660092 38.0 33.0 40.0 18.0 41.0 44 33.783654695916 37.0 33.0 40.0 18.0 41.0 45 33.68578717553099 37.0 33.0 40.0 18.0 41.0 46 33.65073696996437 37.0 33.0 40.0 18.0 41.0 47 33.579805964245004 37.0 33.0 40.0 18.0 41.0 48 33.432225918183555 37.0 33.0 40.0 18.0 41.0 49 33.29950797791637 36.0 32.0 40.0 18.0 41.0 50 33.219354492896535 36.0 32.0 40.0 18.0 41.0 51 32.95334140449779 36.0 32.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 4.0 13 10.0 14 24.0 15 90.0 16 220.0 17 582.0 18 1221.0 19 2390.0 20 4245.0 21 6623.0 22 10328.0 23 15585.0 24 24358.0 25 38467.0 26 53116.0 27 57968.0 28 55773.0 29 55236.0 30 58504.0 31 67317.0 32 79538.0 33 100125.0 34 154172.0 35 198601.0 36 165079.0 37 212511.0 38 330508.0 39 564745.0 40 75.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.077491152506468 22.65086809316303 26.935274311060553 20.336366443269945 2 36.96730646813906 23.569837943244032 27.31460132124342 12.148254267373492 3 27.059708454655517 23.502681602307767 37.257992424091405 12.179617518945308 4 23.76514949152107 25.534205214007677 37.134975828590086 13.565669465881166 5 21.816729636810887 29.656036384915694 35.73926683526629 12.787967143007126 6 20.493847176797928 37.47173209758578 32.23513224616254 9.799288479453748 7 81.88834239456654 2.6958663854605636 13.685762368439356 1.7300288515335434 8 82.36982146424744 2.192503917084068 13.453993255128976 1.9836813635395114 9 77.23169690695435 4.868391734099872 15.097773164840023 2.8021381941057464 10 32.38446207815208 36.07832661991416 20.62966600351995 10.907545298413808 11 28.190690341491763 23.179037653178252 33.2645379524138 15.365734052916185 12 27.77849393488759 20.92828136912111 34.39618431491894 16.89704038107237 13 23.66432638336082 23.21748864521828 35.92961696521558 17.18856800620532 14 17.493739531739568 26.30703471530983 38.13160073517588 18.067625017774724 15 16.812386180855217 25.331185747971467 41.578546118376785 16.277881952796534 16 22.18095090012089 24.485706906870192 37.78058038848792 15.552761804521003 17 21.662526983249457 24.231257024061552 34.3561828796515 19.7500331130375 18 21.32395448075878 24.835176810330736 36.39829380367579 17.442574905234697 19 22.842768666339744 25.744046630244537 33.73449944383387 17.67868525958185 20 22.47642108088928 27.521784834804702 33.023510478116826 16.978283606189194 21 21.781246636091925 25.230849921968407 36.40059731932796 16.587306122611707 22 20.898867246178046 22.488558836441086 36.920084397269626 19.69248952011124 23 18.306083186151973 25.45996113260321 36.738549644527666 19.495406036717153 24 18.52008864991391 26.098345056899053 37.236994992954344 18.1445713002327 25 20.800967830960936 26.108489385444173 34.595527015587265 18.495015768007622 26 18.64682630916104 28.043974113799873 32.978326132632 20.330873444407086 27 18.218593889747538 26.743506633017617 36.40086310959552 18.637036367639325 28 17.38702473931512 26.524052468770755 36.67263365817334 19.41628913374079 29 19.153378260748227 26.028132127885872 35.58776638275836 19.230723228607538 30 21.15938600676259 25.171091410145834 35.59108876110283 18.07843382198874 31 22.163010057060742 24.92479242887563 34.75190028966709 18.160297224396533 32 24.425505411268354 25.125198290614193 32.945279542698984 17.504016755418466 33 23.193124537358816 25.357144597436275 33.40686864069099 18.042862224513925 34 20.420754853219538 26.602061912298957 34.7648797143995 18.212303520082003 35 20.137511024758805 27.90403553793071 33.42055683947021 18.537896597840277 36 23.81414349750755 27.420828831510676 31.27753421052981 17.487493460451958 37 20.876895250726605 30.33544060717129 31.23496346934264 17.552700672759467 38 21.74354871647665 29.11785539148913 30.385364879094222 18.75323101294 39 20.36764109808591 28.749824467677463 30.50838147459555 20.374152959641076 40 22.58114244630704 27.203456691026346 30.96142098564777 19.253979877018843 41 19.483268281165348 27.286560448016072 31.23230556666707 21.99786570415151 42 20.030574740444727 27.94120187701087 31.449190424994207 20.579032957550194 43 20.023708491866156 27.500211524754597 31.915873836447734 20.560206146931517 44 21.01306846447204 28.024615722646086 30.999473292286456 19.962842520595423 45 19.535673262252157 28.584237130988978 30.054588891118573 21.825500715640295 46 20.632811188352715 27.959098421693092 30.643048543491485 20.765041846462708 47 19.780643292184568 27.822039240389135 32.152648666463776 20.244668800962515 48 19.961292077368004 27.960781760054292 31.90608389492602 20.171842267651684 49 20.86670662380356 26.51842657477411 31.676219611866475 20.93864718955586 50 18.860300192387854 27.91138906866647 32.56635121791746 20.66195952102822 51 18.680138689361613 28.46480870409968 31.537477092201314 21.317575514337392 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1671.0 1 2986.5 2 4302.0 3 40942.0 4 77582.0 5 54006.0 6 30430.0 7 26960.0 8 23490.0 9 23757.5 10 24025.0 11 24065.5 12 24106.0 13 23737.0 14 23368.0 15 22037.5 16 20707.0 17 19812.0 18 18917.0 19 18329.5 20 17742.0 21 18669.0 22 19596.0 23 18969.0 24 18342.0 25 20806.5 26 26894.5 27 30518.0 28 33764.0 29 37010.0 30 43184.0 31 49358.0 32 54891.0 33 60424.0 34 67261.5 35 74099.0 36 77600.0 37 81101.0 38 87366.0 39 93631.0 40 102967.0 41 112303.0 42 122912.5 43 133522.0 44 139305.0 45 145088.0 46 157997.0 47 170906.0 48 173507.5 49 176109.0 50 170190.0 51 164271.0 52 148057.5 53 131844.0 54 121684.0 55 111524.0 56 103773.0 57 96022.0 58 87569.0 59 79116.0 60 69755.5 61 60395.0 62 51682.0 63 42969.0 64 36793.5 65 30618.0 66 25033.5 67 19449.0 68 15784.0 69 12119.0 70 9754.5 71 7390.0 72 5961.0 73 4532.0 74 3559.5 75 1930.0 76 1273.0 77 1062.0 78 851.0 79 610.0 80 369.0 81 316.0 82 263.0 83 192.5 84 122.0 85 80.5 86 39.0 87 28.5 88 18.0 89 11.0 90 4.0 91 9.0 92 14.0 93 9.5 94 5.0 95 6.0 96 7.0 97 3.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2257419.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.373033092965706 #Duplication Level Percentage of deduplicated Percentage of total 1 73.1807252407435 20.031784137821024 2 7.492394737847372 4.101791382093164 3 3.2743761617021576 2.6888882109927352 4 2.1070861767453333 2.3070935858312236 5 1.4522136910889938 1.9875746712118452 6 1.1103795293173562 1.8236673361053402 7 0.9130844012218019 1.7495722671920608 8 0.777964774724453 1.7036204418955245 9 0.7010009748696574 1.7269670594977515 >10 8.633792645418042 51.20242883774957 >50 0.32032822692802904 5.3333462348040355 >100 0.032380350480363085 1.5208160521686054 >500 0.0023008940300985876 0.44164192587885537 >1k 0.001807845309363176 1.060084581991377 >5k 0.0 0.0 >10k+ 1.6434957357847055E-4 2.3207232747668973 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51586 2.2851761237058783 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4140 0.18339528461486326 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTT 3786 0.16771365882895464 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTC 3148 0.13945129371197815 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCT 2755 0.12204203118694402 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06343527719045512 0.0 2 0.0 0.0 0.0 0.178256672775413 0.0 3 0.0 0.0 0.0 0.34003434896224405 0.0 4 0.0 0.0 0.0 0.4899400598648279 0.0 5 0.0 0.0 0.0 0.9123250933920553 0.0 6 0.0 0.0 0.0 1.6491843118180542 0.0 7 0.0 0.0 0.0 2.163975761699534 0.0 8 0.0 0.0 0.0 3.0041387974496536 0.0 9 0.0 0.0 0.0 3.575853662966423 0.0 10 0.0 0.0 0.0 4.177691425473073 0.0 11 0.0 0.0 0.0 4.62519363928451 0.0 12 0.0 0.0 0.0 4.925802431892351 0.0 13 0.0 0.0 0.0 5.095553816105916 0.0 14 0.0 0.0 0.0 5.2593692176773565 0.0 15 0.0 0.0 0.0 5.352573004834282 0.0 16 0.0 0.0 0.0 5.470805375519564 0.0 17 4.429837792629547E-5 0.0 0.0 5.618850554549244 0.0 18 4.429837792629547E-5 0.0 0.0 5.800828291070466 0.0 19 4.429837792629547E-5 0.0 0.0 5.9240220800834935 0.0 20 4.429837792629547E-5 0.0 0.0 6.062233019213536 0.0 21 4.429837792629547E-5 0.0 0.0 6.2180304143803165 0.0 22 4.429837792629547E-5 0.0 0.0 6.400451134680801 0.0 23 4.429837792629547E-5 0.0 0.0 6.586061338191979 0.0 24 4.429837792629547E-5 0.0 0.0 6.732733267505944 0.0 25 4.429837792629547E-5 0.0 0.0 6.866425772087504 0.0 26 4.429837792629547E-5 0.0 0.0 7.004016533926578 0.0 27 4.429837792629547E-5 0.0 0.0 7.174919675966225 0.0 28 4.429837792629547E-5 0.0 0.0 7.3339065543437 0.0 29 4.429837792629547E-5 0.0 0.0 7.512163227119113 0.0 30 4.429837792629547E-5 0.0 0.0 7.757266152185306 0.0 31 4.429837792629547E-5 0.0 0.0 7.954969812870362 0.0 32 4.429837792629547E-5 0.0 0.0 8.160337092936668 0.0 33 4.429837792629547E-5 0.0 0.0 8.347010457518078 0.0 34 4.429837792629547E-5 0.0 0.0 8.562256275861946 0.0 35 4.429837792629547E-5 0.0 0.0 8.792696437834536 0.0 36 4.429837792629547E-5 0.0 0.0 8.999924249773747 0.0 37 4.429837792629547E-5 0.0 0.0 9.229478444187809 0.0 38 4.429837792629547E-5 0.0 0.0 9.506387604605083 0.0 39 4.429837792629547E-5 0.0 0.0 10.051036161208884 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 22135 0.0 43.27197 1 ACGGGAT 1115 0.0 40.56054 5 CGACGGT 315 0.0 39.999996 28 CGGTCTA 315 0.0 39.999996 31 CGGTTTT 1890 0.0 39.404762 1 TAGTACG 75 0.0 39.0 1 CGGTAGT 460 0.0 38.641308 12 TACGGGA 1035 0.0 38.47826 4 AGGGCGA 1600 0.0 38.390625 6 TAGGGAT 3785 0.0 38.22325 5 TAAGGGA 3330 0.0 38.10811 4 CTCACGA 325 0.0 38.076923 24 GGGCGAT 2965 0.0 38.018547 7 ATAGGGA 3770 0.0 38.01724 4 AGGGATC 2655 0.0 37.881355 6 CGAGGGA 1710 0.0 37.63158 4 TAGGGAC 2595 0.0 37.54335 5 TCGTTAG 60 1.5643309E-10 37.500004 1 CACGCCG 480 0.0 37.500004 26 TCGTAAG 120 0.0 37.500004 1 >>END_MODULE