SRR1547926_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547926_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2668847
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	36539	1.3690930952579898	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTT	3296	0.12349902411041172	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3023	0.1132698877080627	No Hit
CGTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTC	2774	0.1039400160443817	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2751	0.10307822066982485	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTCGA	40	6.8212103E-9	45.000004	14
CGGTCTA	410	0.0	45.000004	31
TATCCGC	20	7.0349645E-4	45.000004	20
CGTTTTT	15910	0.0	43.500942	1
CGACGGT	440	0.0	42.44318	28
GCGCGAC	305	0.0	40.573772	9
TAGGGTA	1935	0.0	39.76744	5
TAACGGG	640	0.0	39.375004	3
TAGGGCG	835	0.0	39.341316	5
TAGTGCG	145	0.0	38.793106	1
ACGGGAT	995	0.0	38.44221	5
ATTAGCG	165	0.0	38.181816	1
GGGCGAT	3785	0.0	38.10436	7
TACGTTG	65	9.094947E-12	38.076927	1
TAAGGGT	1660	0.0	37.680725	4
TGGGCGA	1090	0.0	37.56881	6
TAGCGAT	30	1.1403263E-4	37.500004	28
CGCGATT	30	1.1403263E-4	37.500004	11
CGAGGGT	810	0.0	37.5	4
CGGTTTT	1405	0.0	37.153027	1