##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547926_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2668847 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31810440988187 31.0 31.0 33.0 30.0 34.0 2 31.68631510161504 31.0 31.0 34.0 30.0 34.0 3 31.652809246839553 31.0 31.0 34.0 30.0 34.0 4 35.534332241600964 37.0 35.0 37.0 33.0 37.0 5 35.51433671544304 37.0 35.0 37.0 33.0 37.0 6 35.583615696216384 37.0 35.0 37.0 33.0 37.0 7 35.9071580349117 37.0 35.0 37.0 35.0 37.0 8 35.914368639341255 37.0 35.0 37.0 35.0 37.0 9 37.66691496365284 39.0 37.0 39.0 35.0 39.0 10 37.043560009247436 39.0 37.0 39.0 33.0 39.0 11 36.933626393719834 39.0 37.0 39.0 33.0 39.0 12 36.52462018242335 39.0 35.0 39.0 32.0 39.0 13 36.412339111234175 39.0 35.0 39.0 32.0 39.0 14 37.46768923059284 40.0 36.0 41.0 32.0 41.0 15 37.61861807739447 40.0 36.0 41.0 32.0 41.0 16 37.68488751884241 40.0 36.0 41.0 33.0 41.0 17 37.62018017518427 40.0 36.0 41.0 33.0 41.0 18 37.478501015607115 39.0 36.0 41.0 32.0 41.0 19 37.367729959791625 39.0 36.0 41.0 32.0 41.0 20 37.177674104210546 39.0 35.0 41.0 32.0 41.0 21 37.06753628064853 39.0 35.0 41.0 32.0 41.0 22 36.98176815681079 39.0 35.0 41.0 32.0 41.0 23 36.84569553818559 38.0 35.0 41.0 31.0 41.0 24 36.79136083859434 38.0 35.0 41.0 31.0 41.0 25 36.81446369911801 38.0 35.0 41.0 31.0 41.0 26 36.7082020812733 38.0 35.0 41.0 31.0 41.0 27 36.63651494446853 38.0 35.0 41.0 31.0 41.0 28 36.56402596327178 38.0 35.0 40.0 31.0 41.0 29 36.53568563503266 38.0 35.0 40.0 31.0 41.0 30 36.435651800196865 38.0 35.0 40.0 31.0 41.0 31 36.267717482493374 38.0 35.0 40.0 30.0 41.0 32 36.06045269736332 38.0 35.0 40.0 30.0 41.0 33 35.850156640676666 38.0 35.0 40.0 29.0 41.0 34 35.60191460956735 38.0 35.0 40.0 27.0 41.0 35 35.43570650546847 38.0 35.0 40.0 27.0 41.0 36 35.331272268511455 38.0 35.0 40.0 26.0 41.0 37 35.21940485910208 38.0 34.0 40.0 25.0 41.0 38 35.10224827425476 38.0 34.0 40.0 25.0 41.0 39 35.018932520298094 38.0 34.0 40.0 24.0 41.0 40 34.88816518893739 38.0 34.0 40.0 24.0 41.0 41 34.77621159999056 38.0 34.0 40.0 23.0 41.0 42 34.774847715136914 38.0 34.0 40.0 23.0 41.0 43 34.72226133607509 38.0 34.0 40.0 23.0 41.0 44 34.58950175862461 38.0 34.0 40.0 23.0 41.0 45 34.47459408501124 37.0 34.0 40.0 23.0 41.0 46 34.415776550697736 37.0 34.0 40.0 23.0 41.0 47 34.342861168137404 37.0 33.0 40.0 23.0 41.0 48 34.193731225506745 37.0 33.0 40.0 23.0 41.0 49 34.049334787644256 37.0 33.0 40.0 22.0 41.0 50 33.94454796397096 36.0 33.0 40.0 22.0 41.0 51 33.63047038665012 36.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 2.0 12 6.0 13 10.0 14 33.0 15 72.0 16 185.0 17 478.0 18 1151.0 19 2256.0 20 3780.0 21 6469.0 22 10110.0 23 15317.0 24 23466.0 25 35029.0 26 47017.0 27 51642.0 28 53478.0 29 57751.0 30 65335.0 31 77955.0 32 95466.0 33 122733.0 34 194681.0 35 269286.0 36 212363.0 37 260062.0 38 397866.0 39 664734.0 40 109.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.05522834392529 24.035697812575993 27.88425113916234 16.024822704336366 2 34.37671773616097 24.986070763891675 27.946862446592107 12.690349053355252 3 28.593246446873877 25.139657687383355 33.336718065891375 12.930377799851398 4 24.955533232141068 27.281518948070083 33.358188011527076 14.404759808261769 5 23.09484207974455 31.474977771299738 31.559770942283315 13.870409206672393 6 21.004763480259452 39.66180901340542 28.818324917089665 10.515102589245469 7 85.07306713348498 3.41443327399435 9.671142632005507 1.8413569605151587 8 85.11345910799683 2.985221708100914 9.582265300333814 2.319053883568447 9 79.87621620872234 5.455089782216815 11.611830876779374 3.0568631322814683 10 33.51477248414765 30.579347560950477 24.488065445490133 11.417814509411741 11 33.06986125469164 24.228102997286843 26.425793610499216 16.27624213752231 12 29.156373520100626 23.60910910217034 29.445037501213072 17.789479876515962 13 23.384854957964993 29.415661519749914 30.15425762510927 17.045225897175822 14 18.38513035779121 32.061897890737086 32.174305983070596 17.37866576840111 15 17.684640595732915 27.418282127075848 38.486657346786835 16.4104199304044 16 20.961224079162275 26.135968079099325 36.229802607642924 16.673005234095474 17 20.453027093722493 26.126525799343312 30.433441857101588 22.987005249832606 18 21.745233053824368 27.013725402767562 32.894916793656584 18.346124749751485 19 23.617689586551798 28.535843381055564 29.073641164143165 18.772825868249473 20 25.061983695580903 28.454534860934327 28.37757278704999 18.10590865643478 21 22.487538626230727 28.808058311323204 31.074804962592463 17.62959809985361 22 21.957721817698804 25.44604467772038 30.990086730337108 21.606146774243708 23 19.042305534937 29.665132546002077 30.651813311141478 20.64074860791945 24 19.257454623663328 28.252500049646905 34.007494622209514 18.48255070448025 25 19.890686877142077 28.696849238641253 32.01172641219223 19.400737472024435 26 19.142910777575484 31.754798982481947 29.028677927209767 20.073612312732802 27 19.16520504922163 31.145996754403683 30.727463957281927 18.96133423909276 28 17.763775892735705 29.624403347213235 33.64700187009596 18.9648188899551 29 19.1674532110683 28.283000112033395 32.44052581508045 20.109020861817857 30 20.02074303997194 29.749663431436872 30.794796404589697 19.434797124001488 31 23.423036239994275 28.649263146220072 28.233990183775994 19.693710430009663 32 23.744973016437434 29.294710412399063 28.484547821587373 18.475768749576126 33 23.31639842973389 29.17274763221721 27.7465512260538 19.764302711995104 34 20.54962311440109 29.234234858723635 30.011312001025164 20.204830025850114 35 19.69202430862466 29.7900179365846 30.005279433403263 20.512678321387476 36 23.58936274728375 28.871269128578746 28.088534112296433 19.450834011841067 37 20.080431737001035 31.216663975117342 29.795863157385945 18.907041130495678 38 20.59454888197038 31.34540871020332 27.58771859158655 20.472323816239747 39 20.20865190098945 29.856151364240812 28.887568301967104 21.04762843280263 40 22.27246447623262 27.9810719760256 28.79854109283897 20.94792245490281 41 18.749932086777548 28.037800593289912 29.41517441801647 23.79709290191607 42 20.562062943285998 28.9942435815916 28.06474106608584 22.37895240903656 43 20.645956849530904 28.572151194879286 29.16248102645075 21.619410929139065 44 20.894790896593175 30.096817089926848 28.34531166455027 20.663080348929707 45 19.433448226893486 31.696683998745527 26.718466813571553 22.151400960789434 46 21.482385464584517 29.93745988436205 27.636428764931075 20.94372588612236 47 20.21239883740057 29.527807326534646 28.76020993335324 21.499583902711546 48 20.837687585687753 27.980734751748603 29.94364232944039 21.237935333123257 49 21.03324019698394 27.23550656894157 29.759667751654558 21.971585482419936 50 19.64481290984459 30.013972325877052 29.315018807747318 21.02619595653104 51 18.687021024434898 30.401930121884096 28.3168724171899 22.594176436491114 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1922.0 1 2894.5 2 3867.0 3 27554.5 4 51242.0 5 35830.5 6 20419.0 7 19222.0 8 18025.0 9 19969.0 10 21913.0 11 23220.5 12 24528.0 13 25006.0 14 25484.0 15 23857.5 16 22231.0 17 20498.5 18 18766.0 19 18106.0 20 17446.0 21 17036.0 22 16626.0 23 17562.5 24 18499.0 25 19958.5 26 24721.0 27 28024.0 28 33977.5 29 39931.0 30 45069.0 31 50207.0 32 57122.0 33 64037.0 34 71061.5 35 78086.0 36 86474.5 37 94863.0 38 104077.5 39 113292.0 40 133306.5 41 153321.0 42 172002.0 43 190683.0 44 200455.0 45 210227.0 46 220418.0 47 230609.0 48 234295.5 49 237982.0 50 224220.0 51 210458.0 52 191020.5 53 171583.0 54 154206.0 55 136829.0 56 121559.5 57 106290.0 58 96552.5 59 86815.0 60 75156.0 61 63497.0 62 54745.0 63 45993.0 64 37778.0 65 29563.0 66 23592.0 67 17621.0 68 13980.0 69 10339.0 70 8339.0 71 6339.0 72 5328.5 73 4318.0 74 3398.5 75 1999.5 76 1520.0 77 1147.5 78 775.0 79 562.0 80 349.0 81 288.5 82 228.0 83 164.0 84 100.0 85 72.0 86 44.0 87 32.5 88 21.0 89 20.5 90 20.0 91 14.0 92 8.0 93 5.0 94 2.0 95 1.5 96 1.0 97 4.0 98 7.0 99 3.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2668847.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.542028143513974 #Duplication Level Percentage of deduplicated Percentage of total 1 75.67192249926106 17.814705291514123 2 8.591585955177747 4.045267167084278 3 3.3392717387519824 2.3583968775762005 4 1.8484015158336957 1.7406048202508302 5 1.1818374300137113 1.391142501922051 6 0.833322479878094 1.1770860764347768 7 0.6430905959093931 1.0597759835409675 8 0.5039056564762283 0.94903689171514 9 0.42395410356698754 0.8982665493959032 >10 4.948144722620689 28.220856266733712 >50 1.6768961147329196 27.72699327544823 >100 0.33360507017967617 10.0428835583146 >500 0.0021123011508865216 0.3427396647308132 >1k 0.0017873317430578258 0.8345481323026954 >5k 0.0 0.0 >10k+ 1.6248470391434783E-4 1.397696943035623 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36539 1.3690930952579898 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTT 3296 0.12349902411041172 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3023 0.1132698877080627 No Hit CGTTCTGTCTCTTATACACATCTGACGCACGAGTCTTCGTATGCCGTCTTC 2774 0.1039400160443817 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2751 0.10307822066982485 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06081277795242665 0.0 2 0.0 0.0 0.0 0.18963245176662433 0.0 3 0.0 0.0 0.0 0.34449333363808415 0.0 4 0.0 0.0 0.0 0.5468653692025058 0.0 5 0.0 0.0 0.0 1.0594837396074035 0.0 6 0.0 0.0 0.0 1.9085020610023729 0.0 7 0.0 0.0 0.0 2.4751137850914646 0.0 8 0.0 0.0 0.0 3.383521048602636 0.0 9 0.0 0.0 0.0 3.90018611033154 0.0 10 0.0 0.0 0.0 4.545745784602864 0.0 11 0.0 0.0 0.0 5.1131068959741794 0.0 12 0.0 0.0 0.0 5.546589969376289 0.0 13 0.0 0.0 0.0 5.77747619102931 0.0 14 0.0 0.0 0.0 5.911579045183182 0.0 15 0.0 0.0 0.0 6.038000679694265 0.0 16 0.0 0.0 0.0 6.271846981112068 0.0 17 0.0 0.0 0.0 6.5419261576253716 0.0 18 0.0 0.0 0.0 6.860790446211416 0.0 19 3.746936411116861E-5 0.0 0.0 7.0529708147376 0.0 20 1.1240809233350582E-4 0.0 0.0 7.261337948559809 0.0 21 1.1240809233350582E-4 0.0 0.0 7.516242032608089 0.0 22 1.1240809233350582E-4 0.0 0.0 7.7947143466822935 0.0 23 2.2481618466701163E-4 0.0 0.0 8.088998732411412 0.0 24 2.6228554877818025E-4 0.0 0.0 8.3197725459721 0.0 25 3.7469364111168604E-4 0.0 0.0 8.521919765351853 0.0 26 4.871017334451919E-4 0.0 0.0 8.711739563939034 0.0 27 5.620404616675291E-4 0.0 0.0 8.909915030723004 0.0 28 5.995098257786977E-4 0.0 0.0 9.126413016557338 0.0 29 6.369791898898663E-4 0.0 0.0 9.368390169987265 0.0 30 6.74448554001035E-4 0.0 0.0 9.663498881726827 0.0 31 0.002023345662003105 0.0 0.0 9.926271532238454 0.0 32 0.002023345662003105 0.0 0.0 10.197849483316203 0.0 33 0.002023345662003105 0.0 0.0 10.440576024028354 0.0 34 0.002023345662003105 0.0 0.0 10.694768190158522 0.0 35 0.002023345662003105 0.0 0.0 10.969531037185721 0.0 36 0.002060815026114273 0.0 0.0 11.22057577673055 0.0 37 0.002060815026114273 0.0 0.0 11.49440188965497 0.0 38 0.002060815026114273 0.0 0.0 11.787524725096644 0.0 39 0.002060815026114273 0.0 0.0 12.221045267862864 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTCGA 40 6.8212103E-9 45.000004 14 CGGTCTA 410 0.0 45.000004 31 TATCCGC 20 7.0349645E-4 45.000004 20 CGTTTTT 15910 0.0 43.500942 1 CGACGGT 440 0.0 42.44318 28 GCGCGAC 305 0.0 40.573772 9 TAGGGTA 1935 0.0 39.76744 5 TAACGGG 640 0.0 39.375004 3 TAGGGCG 835 0.0 39.341316 5 TAGTGCG 145 0.0 38.793106 1 ACGGGAT 995 0.0 38.44221 5 ATTAGCG 165 0.0 38.181816 1 GGGCGAT 3785 0.0 38.10436 7 TACGTTG 65 9.094947E-12 38.076927 1 TAAGGGT 1660 0.0 37.680725 4 TGGGCGA 1090 0.0 37.56881 6 TAGCGAT 30 1.1403263E-4 37.500004 28 CGCGATT 30 1.1403263E-4 37.500004 11 CGAGGGT 810 0.0 37.5 4 CGGTTTT 1405 0.0 37.153027 1 >>END_MODULE