##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547924_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2708583 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3673740106912 31.0 31.0 33.0 30.0 34.0 2 31.764566934075862 31.0 31.0 34.0 30.0 34.0 3 31.813798580290875 31.0 31.0 34.0 30.0 34.0 4 35.63123337922449 37.0 35.0 37.0 33.0 37.0 5 35.57198542558969 37.0 35.0 37.0 33.0 37.0 6 35.63792580843932 37.0 35.0 37.0 33.0 37.0 7 35.95605746621019 37.0 35.0 37.0 35.0 37.0 8 35.9595519133067 37.0 35.0 37.0 35.0 37.0 9 37.715585603247156 39.0 38.0 39.0 35.0 39.0 10 37.110921467054915 39.0 37.0 39.0 33.0 39.0 11 36.988555639609345 39.0 37.0 39.0 33.0 39.0 12 36.62089476305508 39.0 35.0 39.0 32.0 39.0 13 36.512030091010686 39.0 35.0 39.0 32.0 39.0 14 37.59220448478042 40.0 36.0 41.0 32.0 41.0 15 37.73490862196211 40.0 36.0 41.0 33.0 41.0 16 37.78604643091978 40.0 36.0 41.0 33.0 41.0 17 37.71020603762189 40.0 36.0 41.0 33.0 41.0 18 37.59917528833342 39.0 36.0 41.0 32.0 41.0 19 37.51978802200265 39.0 36.0 41.0 32.0 41.0 20 37.36679031065321 39.0 35.0 41.0 32.0 41.0 21 37.26285330743049 39.0 35.0 41.0 32.0 41.0 22 37.19204211205638 39.0 35.0 41.0 32.0 41.0 23 37.04328019484727 39.0 35.0 41.0 32.0 41.0 24 37.017935946581666 39.0 35.0 41.0 32.0 41.0 25 37.03975879638911 39.0 35.0 41.0 32.0 41.0 26 36.949868621341864 39.0 35.0 41.0 31.0 41.0 27 36.89425651715307 39.0 35.0 41.0 31.0 41.0 28 36.83596662904552 39.0 35.0 41.0 31.0 41.0 29 36.828198729741715 39.0 35.0 41.0 31.0 41.0 30 36.730144507294035 39.0 35.0 41.0 31.0 41.0 31 36.594048622471604 39.0 35.0 41.0 30.0 41.0 32 36.43025965975567 39.0 35.0 41.0 30.0 41.0 33 36.27966283477375 39.0 35.0 41.0 30.0 41.0 34 36.09976840288815 39.0 35.0 41.0 29.0 41.0 35 35.97851976476261 39.0 35.0 41.0 29.0 41.0 36 35.89023633390596 39.0 35.0 41.0 28.0 41.0 37 35.80049162237229 39.0 35.0 41.0 27.0 41.0 38 35.68315610044071 38.0 35.0 41.0 27.0 41.0 39 35.60746929298456 38.0 35.0 41.0 27.0 41.0 40 35.465692208804384 38.0 35.0 40.0 26.0 41.0 41 35.355447848561404 38.0 34.0 40.0 25.0 41.0 42 35.353172489083775 38.0 34.0 40.0 26.0 41.0 43 35.29316952812596 38.0 34.0 40.0 26.0 41.0 44 35.18629593407328 38.0 34.0 40.0 25.0 41.0 45 35.07031647174925 38.0 34.0 40.0 24.0 41.0 46 35.01281887983495 38.0 34.0 40.0 24.0 41.0 47 34.96132110406069 38.0 34.0 40.0 24.0 41.0 48 34.82865690288981 38.0 34.0 40.0 24.0 41.0 49 34.6962223420881 38.0 34.0 40.0 24.0 41.0 50 34.62212344978906 37.0 34.0 40.0 24.0 41.0 51 34.34273862015674 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 4.0 12 6.0 13 13.0 14 22.0 15 77.0 16 173.0 17 460.0 18 999.0 19 1979.0 20 3549.0 21 5780.0 22 8955.0 23 13497.0 24 20680.0 25 30624.0 26 40854.0 27 45724.0 28 48905.0 29 53424.0 30 62011.0 31 74343.0 32 91710.0 33 117457.0 34 182961.0 35 247932.0 36 197966.0 37 262659.0 38 425068.0 39 770637.0 40 112.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.31398114807632 24.701882866428683 28.473633630573623 14.510502354921373 2 32.370099051792025 25.97188271505802 28.56984629970726 13.088171933442688 3 28.935720264064273 25.474390114683583 32.11934062939921 13.470548991852935 4 25.530138821664316 27.72641635866429 31.844805937274213 14.898638882397181 5 23.317210511917118 32.36633324509531 30.173673836098065 14.142782406889506 6 21.650028815805165 40.77560111689396 27.317051018927607 10.257319048373263 7 88.52008596376777 2.8706153734258835 7.280264256255023 1.3290344065513222 8 88.79406686079031 2.5277792853311123 7.03810811778705 1.6400457360915284 9 83.2730988860227 5.7214787215307785 8.704108384347093 2.301314008099438 10 30.118848120954755 40.83186669930366 18.643106007827708 10.406179171913875 11 31.12228792693449 23.969765740979692 28.956026084487718 15.951920247598098 12 29.99734547547555 22.857634416224275 29.268920317376278 17.876099790923888 13 24.439605505904748 27.76577273061228 30.109728961600958 17.684892801882018 14 18.98206553020528 31.244270528169153 30.966154627714936 18.807509313910632 15 17.97386308634441 27.98315576816365 36.5387363060316 17.504244839460338 16 22.260532536754457 26.293342312197925 34.761718581265555 16.68440656978206 17 21.269830018131252 25.768049197680114 30.43344065882419 22.528680125364442 18 22.58258284867032 25.853185964764602 32.577366098805165 18.98686508775991 19 23.54655552368157 27.363348289493068 29.549620594975305 19.540475591850058 20 25.353330505286344 27.47218748696274 29.5928535326405 17.581628475110417 21 23.47179318484979 26.785887676323743 32.06362884209197 17.67869029673449 22 23.2494998307233 23.54064837592202 31.50488650338572 21.70496528996896 23 19.49196314087477 27.819269337509688 32.076366129448495 20.612401392167047 24 19.14883169539202 27.455499794542014 34.66111247098575 18.734556039080214 25 20.11594254265053 28.491945788628225 31.916688541573212 19.475423127148034 26 20.03833738895947 30.34752857859626 29.188546188172932 20.42558784427134 27 18.915794716277848 29.97567362713271 31.304264997602065 19.804266658987373 28 17.44425037002743 29.1928657899721 33.96539814360497 19.397485696395496 29 18.949465458507273 26.784373969710362 33.03125656477944 21.234904007002925 30 20.409417027279577 28.036504696367064 32.394318357606174 19.15975991874718 31 22.55485617387394 27.943725556868664 29.78919235629848 19.712225912958917 32 22.643131113205687 27.97244906284947 30.24167987467986 19.142739949264982 33 22.463479981968433 27.721912158497634 29.725912035924317 20.088695823609616 34 19.259959912618516 28.96174863387978 31.13772035045631 20.640571103045392 35 19.378545903891446 28.655684540588194 31.27938113766497 20.68638841785539 36 23.009854230053133 28.699508193029345 28.905630730164074 19.38500684675345 37 19.714478013042243 30.775833710837 30.26966498719072 19.24002328893004 38 20.449179515636036 30.66167808038373 28.702609445603105 20.18653295837713 39 20.316933245169153 28.768917179204035 29.778596410004788 21.135553165622024 40 21.917844127353675 27.909427180189788 29.41674669005897 20.755982002397563 41 19.010198321410122 27.760419377955188 30.53670498559579 22.692677315038896 42 20.741324892019186 28.10753814817563 29.162222460969446 21.988914498835737 43 20.6012516507709 27.791099626631343 29.923173851419726 21.68447487117803 44 20.513604345888606 29.19094596695025 29.321161655374784 20.97428803178636 45 19.910410720291754 30.154069489471063 27.94169497482632 21.99382481541086 46 20.926920090689485 29.21811884664417 29.036215615323584 20.818745447342764 47 20.157587934355345 28.981869855935745 29.993801186819823 20.86674102288909 48 20.233937819147503 28.731259112236916 30.35853064129842 20.676272427317162 49 21.169113148830956 27.132378812094736 30.279190262952994 21.419317776121318 50 19.90077468550899 29.56867114649985 29.838775477805186 20.691778690185973 51 19.352702132443422 29.073172208494256 28.975962708176194 22.598162950886127 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2168.0 1 3274.0 2 4380.0 3 19195.0 4 34010.0 5 25032.5 6 16055.0 7 15057.0 8 14059.0 9 14593.5 10 15128.0 11 15350.5 12 15573.0 13 15552.5 14 15532.0 15 15205.5 16 14879.0 17 14543.0 18 14207.0 19 14330.0 20 14453.0 21 15162.5 22 15872.0 23 17866.5 24 19861.0 25 22374.0 26 29431.5 27 33976.0 28 41246.0 29 48516.0 30 58140.5 31 67765.0 32 75152.5 33 82540.0 34 93035.0 35 103530.0 36 110944.0 37 118358.0 38 128088.0 39 137818.0 40 155751.5 41 173685.0 42 187462.0 43 201239.0 44 213182.0 45 225125.0 46 225002.5 47 224880.0 48 218477.0 49 212074.0 50 198812.5 51 185551.0 52 172694.0 53 159837.0 54 145385.5 55 130934.0 56 118636.5 57 106339.0 58 96066.0 59 85793.0 60 76457.5 61 67122.0 62 56934.0 63 46746.0 64 38835.0 65 30924.0 66 24385.0 67 17846.0 68 14153.0 69 10460.0 70 8394.0 71 6328.0 72 5160.5 73 3993.0 74 3409.5 75 2192.0 76 1558.0 77 1203.0 78 848.0 79 650.0 80 452.0 81 341.0 82 230.0 83 173.5 84 117.0 85 85.0 86 53.0 87 36.5 88 20.0 89 17.5 90 15.0 91 12.5 92 10.0 93 7.0 94 4.0 95 4.5 96 5.0 97 3.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2708583.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.823309488916486 #Duplication Level Percentage of deduplicated Percentage of total 1 76.25885393500144 16.642205706936135 2 8.069750661741008 3.522173323791252 3 2.885438376786773 1.889094441234437 4 1.54913980245395 1.3522942940220601 5 0.9542896057919307 1.0412878704626707 6 0.7035166240233852 0.9211836609996021 7 0.5389817158924006 0.8233655356350981 8 0.43660906006239364 0.7622603714725235 9 0.35718519834400314 0.7015466815489081 >10 5.979957617716732 33.735138637010905 >50 2.0182564990284213 30.020457869897925 >100 0.24388460843776577 7.059180781316381 >500 0.002929875426589027 0.4385502834080109 >1k 0.0010340736799725977 0.33590845464124747 >5k 0.0 0.0 >10k+ 1.723456133287663E-4 0.755352087622906 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20083 0.7414578028437747 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.050358434650147325 0.0 2 0.0 0.0 0.0 0.1471618185597414 0.0 3 0.0 0.0 0.0 0.23510448083001334 0.0 4 0.0 0.0 0.0 0.38241397808374344 0.0 5 0.0 0.0 0.0 0.6818325301458364 0.0 6 0.0 0.0 0.0 1.0595946293689358 0.0 7 0.0 0.0 0.0 1.2733595389175816 0.0 8 0.0 0.0 0.0 1.7508047565830547 0.0 9 0.0 0.0 0.0 1.9331510239856042 0.0 10 0.0 0.0 0.0 2.2850693517606806 0.0 11 0.0 0.0 0.0 2.6753841399728198 0.0 12 0.0 0.0 0.0 2.9868015859214947 0.0 13 0.0 0.0 0.0 3.1251396025154112 0.0 14 0.0 0.0 0.0 3.1891952360330107 0.0 15 0.0 0.0 0.0 3.287955362637955 0.0 16 0.0 0.0 0.0 3.4833342747850073 0.0 17 0.0 0.0 0.0 3.727964031377292 0.0 18 0.0 0.0 0.0 4.013316187836962 0.0 19 0.0 0.0 0.0 4.176574984041471 0.0 20 0.0 0.0 0.0 4.365640632020507 0.0 21 0.0 0.0 0.0 4.598160735705718 0.0 22 0.0 0.0 0.0 4.856856887900427 0.0 23 0.0 0.0 0.0 5.131317740678429 0.0 24 0.0 0.0 0.0 5.331570049727108 0.0 25 0.0 0.0 0.0 5.519269669786748 0.0 26 0.0 0.0 0.0 5.700176069922908 0.0 27 7.383934699435092E-5 0.0 0.0 5.89869315431722 0.0 28 7.383934699435092E-5 0.0 0.0 6.10861841782216 0.0 29 7.383934699435092E-5 0.0 0.0 6.346159597102987 0.0 30 7.383934699435092E-5 0.0 0.0 6.621506522044922 0.0 31 7.383934699435092E-5 0.0 0.0 6.8700128443544095 0.0 32 7.383934699435092E-5 0.0 0.0 7.102902144774593 0.0 33 7.383934699435092E-5 0.0 0.0 7.339778769932471 0.0 34 7.383934699435092E-5 0.0 0.0 7.589761879181845 0.0 35 7.383934699435092E-5 0.0 0.0 7.8717543453532715 0.0 36 7.383934699435092E-5 0.0 0.0 8.121072900479698 0.0 37 7.383934699435092E-5 0.0 0.0 8.382538028186694 0.0 38 7.383934699435092E-5 0.0 0.0 8.661023125375888 0.0 39 7.383934699435092E-5 0.0 0.0 9.044581613338044 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 60 0.0 44.999996 9 CGTTTTT 11295 0.0 41.89243 1 CGGTCTA 590 0.0 41.5678 31 GACGGTC 620 0.0 39.919353 29 CACGACG 630 0.0 39.642857 26 CGACGGT 625 0.0 39.600002 28 ACGGTCT 625 0.0 39.600002 30 TCGCGCA 165 0.0 39.545452 34 CTCACGA 645 0.0 39.418602 24 TACGGGA 1600 0.0 39.375 4 CTCGCGC 190 0.0 39.078945 33 GGGCGAT 3720 0.0 38.52823 7 ATAGGGT 1210 0.0 38.305782 4 TAAGGGA 4195 0.0 38.18832 4 ACGGGAT 1490 0.0 38.05369 5 GCGATAC 125 0.0 37.800003 9 TAGGGTA 1600 0.0 37.546875 5 TGCGTAG 270 0.0 37.500004 1 CGAGGGA 2340 0.0 37.5 4 TGGGCGA 1110 0.0 37.5 6 >>END_MODULE