SRR1547923_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547923_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2667146
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	53275	1.9974534577409708	No Hit
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA	7513	0.28168686678569527	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4217	0.15810907989288925	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	23365	0.0	43.65183	1
CGACGGT	410	0.0	40.609756	28
ACGGTCT	410	0.0	40.609756	30
TACGGGA	1235	0.0	40.080975	4
GCGAGAC	795	0.0	39.905663	21
CGGTTTT	1855	0.0	39.66307	1
ACACGAC	795	0.0	39.622643	26
CGGTCTA	415	0.0	39.578312	31
CACGACC	810	0.0	38.88889	27
TAGGGAT	4910	0.0	38.309574	5
AGGGCGA	1810	0.0	38.28729	6
GGGCGAT	3445	0.0	38.272858	7
GACACGA	825	0.0	38.181816	25
TAGGGAC	3540	0.0	38.135593	5
ATAGGGA	4735	0.0	38.062305	4
ACGACCA	835	0.0	37.72455	28
GCTCAAC	1885	0.0	37.59947	1
AGACACG	850	0.0	37.588238	24
TACCGCG	30	1.1403263E-4	37.499996	1
AGGGATT	5750	0.0	37.447826	6