##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547923_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2667146 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34012048834222 31.0 31.0 33.0 30.0 34.0 2 31.696072131034448 31.0 31.0 34.0 30.0 34.0 3 31.524257014801588 31.0 31.0 34.0 30.0 34.0 4 35.479153747113955 37.0 35.0 37.0 33.0 37.0 5 35.489267179224534 37.0 35.0 37.0 33.0 37.0 6 35.59322811724593 37.0 35.0 37.0 33.0 37.0 7 35.91375350280787 37.0 35.0 37.0 35.0 37.0 8 35.93338084979225 37.0 35.0 37.0 35.0 37.0 9 37.7163627337986 39.0 38.0 39.0 35.0 39.0 10 37.24183153078234 39.0 37.0 39.0 34.0 39.0 11 37.01487245167681 39.0 37.0 39.0 33.0 39.0 12 36.734426611816524 39.0 35.0 39.0 32.0 39.0 13 36.6696952472793 39.0 35.0 39.0 32.0 39.0 14 37.847876344227124 40.0 36.0 41.0 33.0 41.0 15 37.95747101958423 40.0 37.0 41.0 33.0 41.0 16 37.97582022131522 40.0 36.0 41.0 33.0 41.0 17 37.884599118308486 40.0 36.0 41.0 33.0 41.0 18 37.697034208101094 39.0 36.0 41.0 33.0 41.0 19 37.52462069942928 39.0 36.0 41.0 33.0 41.0 20 37.29154272019604 39.0 35.0 41.0 32.0 41.0 21 37.17510814931016 39.0 35.0 41.0 32.0 41.0 22 37.09675248374105 39.0 35.0 41.0 32.0 41.0 23 36.952912588962135 39.0 35.0 41.0 32.0 41.0 24 36.898939540617576 38.0 35.0 41.0 32.0 41.0 25 36.884984174094704 39.0 35.0 41.0 32.0 41.0 26 36.77939040457478 38.0 35.0 41.0 31.0 41.0 27 36.700750165157814 38.0 35.0 41.0 31.0 41.0 28 36.600827626234185 38.0 35.0 41.0 31.0 41.0 29 36.579333114872604 38.0 35.0 41.0 31.0 41.0 30 36.46700143149269 38.0 35.0 40.0 31.0 41.0 31 36.284584345963815 38.0 35.0 40.0 30.0 41.0 32 35.991821220135684 38.0 35.0 40.0 30.0 41.0 33 35.69227518853486 38.0 35.0 41.0 27.0 41.0 34 35.376196503678464 38.0 35.0 40.0 25.0 41.0 35 35.13005549752432 38.0 34.0 41.0 24.0 41.0 36 34.96623844363975 38.0 34.0 40.0 23.0 41.0 37 34.84313307183034 38.0 34.0 40.0 23.0 41.0 38 34.698025529911 38.0 34.0 40.0 22.0 41.0 39 34.586265243822425 38.0 34.0 40.0 22.0 41.0 40 34.44095936255458 38.0 34.0 40.0 21.0 41.0 41 34.30923391520374 38.0 33.0 40.0 20.0 41.0 42 34.27069946677085 38.0 33.0 40.0 20.0 41.0 43 34.17635292556163 38.0 33.0 40.0 20.0 41.0 44 33.99271955865933 37.0 33.0 40.0 18.0 41.0 45 33.87127326363086 37.0 33.0 40.0 19.0 41.0 46 33.81144264318489 37.0 33.0 40.0 19.0 41.0 47 33.76632550299084 37.0 33.0 40.0 19.0 41.0 48 33.65125268732945 37.0 33.0 40.0 19.0 41.0 49 33.50813566261464 36.0 33.0 40.0 18.0 41.0 50 33.428880908656666 36.0 33.0 40.0 18.0 41.0 51 33.14932665853313 36.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 4.0 12 5.0 13 6.0 14 35.0 15 73.0 16 187.0 17 550.0 18 1249.0 19 2391.0 20 4319.0 21 7143.0 22 11009.0 23 16838.0 24 26378.0 25 41784.0 26 57796.0 27 63466.0 28 61791.0 29 61729.0 30 66284.0 31 75367.0 32 90308.0 33 113326.0 34 171414.0 35 242041.0 36 209743.0 37 262176.0 38 403911.0 39 675714.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.642004599673207 23.08598779369408 27.364193786166936 18.907813820465773 2 35.8043016767736 23.888718502849112 27.23525446301027 13.071725357367015 3 27.072608698586432 24.303918870583015 35.95539951693683 12.668072913893727 4 23.28957619867829 26.563825152428848 35.496706966922694 14.649891681970164 5 21.778560303785394 31.132941353791654 33.77719104990878 13.31130729251417 6 20.24096168713674 38.86536395082984 30.84206863816229 10.051605723871134 7 83.42340464301542 2.550254091826994 11.995406325712953 2.0309349394446348 8 83.61345798092793 2.3605381932597616 12.40310804132957 1.622895784482739 9 78.69452965829392 5.460181032459415 13.62366364645955 2.221625662787114 10 32.284246906618534 40.90563471216049 17.629256141208618 9.180862240012358 11 26.178544406642906 24.64000845847959 33.27556871652321 15.9058784183543 12 25.797612879084987 22.628570014539886 33.01180362829781 18.562013478077315 13 22.354681745956164 26.597194154350756 33.327571868956554 17.720552230736526 14 17.572866277286657 29.54663899164125 33.96023314809163 18.920261582980462 15 16.758587643871014 26.91959870213329 39.01454963470316 17.307264019292532 16 20.88423355901777 26.171008261265037 37.006485584216236 15.938272595500958 17 19.63402078476394 25.116847746617545 33.47180844243247 21.777323026186043 18 20.69916682476325 26.01184937007573 35.13260991336807 18.156373891792953 19 21.64650904000006 27.3800159421344 32.66540339373998 18.308071624125564 20 23.773314246764144 27.342635161329753 31.95726818104446 16.926782410861648 21 21.858533428616205 27.575843242177218 33.64067808811366 16.924945241092914 22 22.4629997757903 23.675869262500065 33.39198529064401 20.469145671065625 23 18.43041213341902 28.517523975065483 33.662836605120226 19.38922728639527 24 18.155998959187087 27.4407175310238 36.71583782815039 17.687445681638724 25 19.133523249195957 29.14628595509957 33.66621099857301 18.05397979713147 26 19.45918971064951 30.293917168388983 31.56565107421941 18.681242046742096 27 18.639699514012356 28.951845905698452 33.67910868021473 18.729345900074463 28 17.590225656938166 28.244385571693485 36.07207854388174 18.093310227486608 29 18.05371734430736 27.00639560039083 35.56067046948311 19.3792165858187 30 19.01830645941392 27.275147292274216 34.90198886750107 18.8045573808108 31 21.97052579798781 27.909833207480954 31.49486379823227 18.624777196298965 32 21.157746894995626 28.55434235696134 31.918612629379865 18.36929811866317 33 20.301963222110825 28.26545678414305 31.14970084127378 20.282879152472344 34 18.217862839154662 29.349761880302015 32.68737444444361 19.74500083609971 35 18.955992660319307 28.90569170191658 32.41183647239409 19.726479165370026 36 20.71847585396525 29.562911066735754 30.234077924493075 19.484535154805922 37 18.721022396224278 31.099647338390923 30.3650418837214 19.814288381663395 38 19.216045915746644 31.212839492101295 29.408476326380335 20.162638265771726 39 19.365344079401726 29.942230384088457 29.61352696852741 21.078898567982403 40 21.07604908017784 28.124107191732286 30.384013473578126 20.415830254511754 41 18.794021774586017 28.346629693312625 30.58257778164375 22.276770750457604 42 20.620281004489442 29.032643882262164 28.661835535062576 21.685239578185822 43 20.320972305228135 29.169944202529596 29.671604029175757 20.837479463066515 44 20.243623708638374 30.007206204684707 29.725781790723115 20.023388295953804 45 19.225869150020284 30.590038940500445 28.956795016095853 21.227296893383414 46 20.27268098559284 29.927757985502108 29.259740561634047 20.539820467271007 47 19.783618894503714 29.404127108152313 30.348657328845142 20.463596668498838 48 19.773645687187727 28.76201752734946 31.005051841931415 20.4592849435314 49 20.045809265784477 28.131230911243705 30.491131719073493 21.331828103898324 50 18.609817385324988 29.864206908808143 31.346915391958298 20.179060313908575 51 18.644423664846244 29.628786725586075 30.137307818919552 21.589481790648133 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2303.0 1 3249.5 2 4196.0 3 41464.5 4 78733.0 5 55272.0 6 31811.0 7 29374.5 8 26938.0 9 28091.5 10 29245.0 11 30454.0 12 31663.0 13 31588.5 14 31514.0 15 29787.5 16 28061.0 17 25962.5 18 23864.0 19 22295.5 20 20727.0 21 20686.5 22 20646.0 23 21722.0 24 22798.0 25 25238.5 26 31011.0 27 34343.0 28 39608.5 29 44874.0 30 54934.5 31 64995.0 32 69676.0 33 74357.0 34 80837.5 35 87318.0 36 95393.0 37 103468.0 38 110992.5 39 118517.0 40 133536.5 41 148556.0 42 159787.0 43 171018.0 44 179945.5 45 188873.0 46 193976.5 47 199080.0 48 199327.5 49 199575.0 50 192081.0 51 184587.0 52 168910.5 53 153234.0 54 136811.5 55 120389.0 56 111054.5 57 101720.0 58 90770.5 59 79821.0 60 70926.5 61 62032.0 62 56881.5 63 51731.0 64 44858.0 65 37985.0 66 30912.5 67 23840.0 68 19090.0 69 14340.0 70 11385.5 71 8431.0 72 7035.5 73 5640.0 74 4910.0 75 3270.0 76 2360.0 77 1618.5 78 877.0 79 693.5 80 510.0 81 339.5 82 169.0 83 115.5 84 62.0 85 51.5 86 41.0 87 31.0 88 21.0 89 17.5 90 14.0 91 10.0 92 6.0 93 4.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2667146.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.28609938097372 #Duplication Level Percentage of deduplicated Percentage of total 1 75.06240277708135 18.980353763959567 2 7.465188958815933 3.775310198207348 3 3.0525661115962186 2.315624701944435 4 1.922302027106423 1.94430080390641 5 1.2999497594873475 1.6435329404334977 6 1.0354192578847825 1.5709028553509201 7 0.7700968968863398 1.363092266735322 8 0.6180106463016067 1.2501662896705783 9 0.5180200981778704 1.1788836915480656 >10 7.166056213628 42.775944454888055 >50 1.0121809704212983 16.637547269533044 >100 0.07236879942653843 2.827555431354636 >500 0.003473947591228862 0.5969858395949535 >1k 0.0016614531958051083 0.8181581892267349 >5k 1.5104119961864622E-4 0.28693971037533655 >10k+ 1.5104119961864622E-4 2.034701593271137 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 53275 1.9974534577409708 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 7513 0.28168686678569527 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4217 0.15810907989288925 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1247978175922878E-4 0.0 0.0 0.0520031524333501 0.0 2 1.1247978175922878E-4 0.0 0.0 0.13909999677557958 0.0 3 1.1247978175922878E-4 0.0 0.0 0.26136551954786125 0.0 4 1.1247978175922878E-4 0.0 0.0 0.3783069993168728 0.0 5 1.1247978175922878E-4 0.0 0.0 0.6953500108355523 0.0 6 1.1247978175922878E-4 0.0 0.0 1.2206305916511506 0.0 7 1.1247978175922878E-4 0.0 0.0 1.5628690742838975 0.0 8 1.1247978175922878E-4 0.0 0.0 2.133591486930224 0.0 9 1.1247978175922878E-4 0.0 0.0 2.4478599971655095 0.0 10 1.1247978175922878E-4 0.0 0.0 2.8490753787006784 0.0 11 1.1247978175922878E-4 0.0 0.0 3.207735909470273 0.0 12 1.1247978175922878E-4 0.0 0.0 3.4935845281810596 0.0 13 1.1247978175922878E-4 0.0 0.0 3.668828028161938 0.0 14 1.1247978175922878E-4 0.0 0.0 3.754875061207748 0.0 15 1.1247978175922878E-4 0.0 0.0 3.8725664061884877 0.0 16 1.1247978175922878E-4 0.0 0.0 4.0183776966090345 0.0 17 1.4997304234563838E-4 0.0 0.0 4.200070037410775 0.0 18 1.4997304234563838E-4 0.0 0.0 4.421355261391765 0.0 19 1.4997304234563838E-4 0.0 0.0 4.551569355408366 0.0 20 1.4997304234563838E-4 0.0 0.0 4.700830025802862 0.0 21 1.4997304234563838E-4 0.0 0.0 4.872586652549204 0.0 22 1.4997304234563838E-4 0.0 0.0 5.066689262605046 0.0 23 1.4997304234563838E-4 0.0 0.0 5.286174810077888 0.0 24 1.4997304234563838E-4 0.0 0.0 5.45125763643985 0.0 25 1.4997304234563838E-4 0.0 0.0 5.623089249707365 0.0 26 1.4997304234563838E-4 0.0 0.0 5.774974448342911 0.0 27 1.4997304234563838E-4 0.0 0.0 5.936045495822126 0.0 28 1.4997304234563838E-4 0.0 0.0 6.102815518910476 0.0 29 1.4997304234563838E-4 0.0 0.0 6.282595703422309 0.0 30 1.4997304234563838E-4 0.0 0.0 6.517415994474993 0.0 31 1.4997304234563838E-4 0.0 0.0 6.715455396892408 0.0 32 1.4997304234563838E-4 0.0 0.0 6.924255365098124 0.0 33 1.4997304234563838E-4 0.0 0.0 7.120982503395015 0.0 34 1.4997304234563838E-4 0.0 0.0 7.340992956516066 0.0 35 1.4997304234563838E-4 0.0 0.0 7.565090175041036 0.0 36 1.4997304234563838E-4 0.0 0.0 7.766541464171815 0.0 37 1.4997304234563838E-4 0.0 0.0 7.980365529296109 0.0 38 1.4997304234563838E-4 0.0 0.0 8.19568932484386 0.0 39 1.4997304234563838E-4 0.0 0.0 8.45529266114416 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 23365 0.0 43.65183 1 CGACGGT 410 0.0 40.609756 28 ACGGTCT 410 0.0 40.609756 30 TACGGGA 1235 0.0 40.080975 4 GCGAGAC 795 0.0 39.905663 21 CGGTTTT 1855 0.0 39.66307 1 ACACGAC 795 0.0 39.622643 26 CGGTCTA 415 0.0 39.578312 31 CACGACC 810 0.0 38.88889 27 TAGGGAT 4910 0.0 38.309574 5 AGGGCGA 1810 0.0 38.28729 6 GGGCGAT 3445 0.0 38.272858 7 GACACGA 825 0.0 38.181816 25 TAGGGAC 3540 0.0 38.135593 5 ATAGGGA 4735 0.0 38.062305 4 ACGACCA 835 0.0 37.72455 28 GCTCAAC 1885 0.0 37.59947 1 AGACACG 850 0.0 37.588238 24 TACCGCG 30 1.1403263E-4 37.499996 1 AGGGATT 5750 0.0 37.447826 6 >>END_MODULE