##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547922_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2237114 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.268898679280536 31.0 31.0 33.0 30.0 34.0 2 31.645266177762956 31.0 31.0 34.0 30.0 34.0 3 31.69181588421511 31.0 31.0 34.0 30.0 34.0 4 35.53062472453348 37.0 35.0 37.0 33.0 37.0 5 35.45669375811872 37.0 35.0 37.0 33.0 37.0 6 35.52256076355519 37.0 35.0 37.0 33.0 37.0 7 35.870260970160665 37.0 35.0 37.0 35.0 37.0 8 35.877352249371285 37.0 35.0 37.0 35.0 37.0 9 37.63223286788246 39.0 37.0 39.0 35.0 39.0 10 36.94756950249295 39.0 37.0 39.0 32.0 39.0 11 36.82425705618936 39.0 37.0 39.0 32.0 39.0 12 36.32843565415084 38.0 35.0 39.0 32.0 39.0 13 36.15256531406089 38.0 35.0 39.0 32.0 39.0 14 37.12052224428438 39.0 35.0 41.0 31.0 41.0 15 37.32504914814355 39.0 35.0 41.0 32.0 41.0 16 37.43623570367894 39.0 35.0 41.0 32.0 41.0 17 37.39589533658097 39.0 35.0 41.0 32.0 41.0 18 37.294289875258926 39.0 35.0 41.0 32.0 41.0 19 37.21610163809265 39.0 35.0 41.0 32.0 41.0 20 37.027761213778106 39.0 35.0 41.0 32.0 41.0 21 36.92301912195802 39.0 35.0 41.0 32.0 41.0 22 36.854352080403594 38.0 35.0 41.0 31.0 41.0 23 36.73011433480815 38.0 35.0 40.0 31.0 41.0 24 36.66234174923584 38.0 35.0 40.0 31.0 41.0 25 36.67547474111735 38.0 35.0 40.0 31.0 41.0 26 36.57277054276179 38.0 35.0 40.0 31.0 41.0 27 36.49331862390562 38.0 35.0 40.0 31.0 41.0 28 36.42787046167518 38.0 35.0 40.0 31.0 41.0 29 36.403390260845 38.0 35.0 40.0 31.0 41.0 30 36.298162275145565 38.0 35.0 40.0 30.0 41.0 31 36.16190860188618 38.0 35.0 40.0 30.0 41.0 32 35.980749304684515 38.0 35.0 40.0 30.0 41.0 33 35.820225969709185 38.0 35.0 40.0 29.0 41.0 34 35.60922152380254 38.0 35.0 40.0 28.0 41.0 35 35.49488716265689 38.0 34.0 40.0 27.0 41.0 36 35.35966785778463 38.0 34.0 40.0 27.0 41.0 37 35.224156211976684 38.0 34.0 40.0 26.0 41.0 38 35.099756650756284 38.0 34.0 40.0 25.0 41.0 39 35.033114986540696 38.0 34.0 40.0 25.0 41.0 40 34.843937769823086 38.0 34.0 40.0 24.0 41.0 41 34.74178383399326 37.0 34.0 40.0 24.0 41.0 42 34.73823685337448 37.0 34.0 40.0 24.0 41.0 43 34.67331034538249 37.0 34.0 40.0 24.0 41.0 44 34.5615999005862 37.0 34.0 40.0 24.0 41.0 45 34.465855562121554 37.0 33.0 40.0 23.0 41.0 46 34.40116104945926 37.0 33.0 40.0 23.0 41.0 47 34.316836781674965 37.0 33.0 40.0 23.0 41.0 48 34.15272534166788 37.0 33.0 40.0 23.0 41.0 49 33.99398868363436 36.0 33.0 40.0 23.0 41.0 50 33.87289382659981 36.0 33.0 40.0 22.0 41.0 51 33.53922553790285 36.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 3.0 12 4.0 13 11.0 14 22.0 15 58.0 16 154.0 17 366.0 18 868.0 19 1868.0 20 3195.0 21 5213.0 22 8257.0 23 12505.0 24 19251.0 25 27984.0 26 36588.0 27 40744.0 28 44110.0 29 49842.0 30 58549.0 31 70298.0 32 86506.0 33 110872.0 34 176337.0 35 248394.0 36 178276.0 37 211142.0 38 318041.0 39 527578.0 40 73.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.332824344222065 25.11579651282858 28.972148938319638 14.579230204629715 2 30.61319181767223 26.305454259371675 29.824899401639794 13.256454521316302 3 27.597029029365512 25.855186637784218 32.92585894147549 13.62192539137478 4 25.28145637638493 27.509729052699143 32.6666410384093 14.542173532506613 5 22.237489908873663 32.450067363576466 31.309311908110182 14.003130819439688 6 20.397842935138755 41.412954368887775 27.77475801411998 10.414444681853494 7 86.12904840790411 3.5328552769326906 8.304494093729689 2.0336022214335077 8 85.92789638793553 3.0514314424745455 8.012734263877478 3.007937905712449 9 80.96985669930098 5.34317875620107 10.328932723142406 3.35803182135555 10 35.62688356516476 29.214291269912934 22.871833978956815 12.28699118596549 11 33.917225496778435 24.196978786060967 25.334605210105522 16.551190507055072 12 30.61314711722335 23.517397861709327 28.211704901940628 17.657750119126696 13 22.823512793715476 31.32451006073003 29.577393016180668 16.274584129373824 14 17.23814700547223 34.9154759212092 30.434524123491247 17.41185294982732 15 15.969101261714872 28.34366062704002 39.361561368799265 16.325676742445847 16 18.723185318226964 26.235810960013662 37.54497982668742 17.496023895071954 17 18.70619914765184 26.911905249352515 28.926822683153386 25.45507291984226 18 19.95727531095867 28.086275442377996 32.862160801818774 19.094288444844562 19 22.898564847388197 30.54202870305224 26.925315384017086 19.63409106554248 20 23.10248829518746 29.804560697398525 27.90327180465546 19.18967920275855 21 20.331462768549123 30.371854094158813 31.116384770735866 18.180298366556197 22 20.355735112292 26.78509007587454 29.445660793325683 23.413514018507776 23 17.049421710292815 31.354369960583146 29.158594510606072 22.437613818517967 24 18.336794638091757 29.423042366191442 33.83761399731976 18.40254899839704 25 18.70686965438507 29.788200333107746 31.314810063322657 20.190119949184528 26 17.36907462024734 33.202912323645556 28.050738585516875 21.377274470590233 27 17.721001254294595 32.643620307235125 29.710153349359935 19.925225089110345 28 16.190636686373605 30.737235563319526 32.905207334092054 20.166920416214822 29 16.698433785672076 28.565061950352106 32.31395449673106 22.422549767244764 30 18.756442452195106 30.756724959032038 30.63938628071703 19.847446308055826 31 21.96995772231545 29.11322355499094 27.626352523832043 21.29046619886157 32 22.881131672324255 28.664252246421057 28.163115514005995 20.291500567248697 33 22.117379802727978 29.279106920791698 26.44438325449664 22.15913002198368 34 17.704640890003816 29.70215196901007 29.769560245923987 22.82364689506212 35 18.323786807467123 29.03964661613132 29.466088898464722 23.170477677936844 36 24.27180733748928 28.184839932162596 27.23772682125274 20.30562590909538 37 18.9681884785487 30.8143885380897 29.808583737797896 20.408839245563705 38 19.90144445030517 31.732222854981913 26.154098539457532 22.212234155255388 39 19.91083154457037 30.296310335548387 28.23977678383846 21.553081336042776 40 21.834425961305502 28.66545915854087 28.274821935761878 21.225292944391747 41 19.28793078940099 26.826795594681364 29.064589466607423 24.820684149310228 42 21.18533074309132 27.832466293626524 28.2888578767108 22.69334508657136 43 20.39019915837995 27.945469028399984 28.690402009016974 22.973929804203095 44 19.785983190843204 30.197030638581673 27.734929914166194 22.28205625640893 45 18.010794264396 32.24484760275963 26.16858148489527 23.575776647949098 46 21.41772837682836 30.573274316820694 27.25627750753873 20.75271979881222 47 20.02615870268569 28.833979850825664 28.83947800603814 22.300383440450506 48 20.157622722847382 28.56376563733453 28.890794121354567 22.38781751846352 49 20.989453376090804 26.36982290576162 29.20763090302953 23.43309281511805 50 19.0309479087789 29.422461260355977 29.296987100344463 22.24960373052066 51 17.79064455365261 30.284017712105864 27.4364650169817 24.488872717259827 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1886.0 1 2584.5 2 3283.0 3 15272.5 4 27262.0 5 19534.5 6 11807.0 7 11855.0 8 11903.0 9 13999.5 10 16096.0 11 17608.5 12 19121.0 13 19487.0 14 19853.0 15 18441.5 16 17030.0 17 15661.5 18 14293.0 19 13681.5 20 13070.0 21 12858.0 22 12646.0 23 13583.5 24 14521.0 25 16795.0 26 21506.0 27 23943.0 28 28211.5 29 32480.0 30 39543.0 31 46606.0 32 51345.0 33 56084.0 34 63720.5 35 71357.0 36 77880.5 37 84404.0 38 93027.0 39 101650.0 40 117264.5 41 132879.0 42 149659.0 43 166439.0 44 172067.0 45 177695.0 46 182308.5 47 186922.0 48 203266.5 49 219611.0 50 214382.0 51 209153.0 52 188335.0 53 167517.0 54 140794.5 55 114072.0 56 98467.0 57 82862.0 58 70749.5 59 58637.0 60 49158.0 61 39679.0 62 32229.5 63 24780.0 64 20442.5 65 16105.0 66 12244.0 67 8383.0 68 7073.0 69 5763.0 70 4650.0 71 3537.0 72 3018.0 73 2499.0 74 1726.5 75 721.0 76 488.0 77 421.0 78 354.0 79 280.5 80 207.0 81 150.0 82 93.0 83 76.0 84 59.0 85 40.5 86 22.0 87 19.0 88 16.0 89 15.5 90 15.0 91 9.0 92 3.0 93 4.0 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2237114.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.10577399004024 #Duplication Level Percentage of deduplicated Percentage of total 1 75.18195893905109 18.875012692523022 2 9.571052292120596 4.805773513856726 3 3.749830127716543 2.824271630624858 4 1.9458485211361172 1.9540813276198963 5 1.2168492293675817 1.5274970866228577 6 0.8630914213364033 1.3001146894088604 7 0.609946869305937 1.0719231772709228 8 0.4744050022669385 0.9528243813326629 9 0.3899809750884895 0.8811696798888418 >10 4.209080084081796 24.980890143894513 >50 1.380331849587351 24.580064229057736 >100 0.4009512339210144 13.485688646005462 >500 0.0043287275805476925 0.7947842250863164 >1k 0.0021643637902738462 1.0633046475317276 >5k 0.0 0.0 >10k+ 1.8036364918948722E-4 0.9025999292756122 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19933 0.8910140475630657 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3700 0.1653916608630584 No Hit CTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGCT 2939 0.13137461926392666 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTCTGC 2280 0.10191702345074949 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.470044888190767E-5 0.0 0.0 0.16762668330715377 0.0 2 4.470044888190767E-5 0.0 0.0 0.5190616124167119 0.0 3 4.470044888190767E-5 0.0 0.0 0.845777193294575 0.0 4 4.470044888190767E-5 0.0 0.0 1.2751697052541802 0.0 5 4.470044888190767E-5 0.0 0.0 2.277532570982078 0.0 6 4.470044888190767E-5 0.0 0.0 3.377342415272534 0.0 7 4.470044888190767E-5 0.0 0.0 4.080033471696122 0.0 8 4.470044888190767E-5 0.0 0.0 5.492344154119996 0.0 9 4.470044888190767E-5 0.0 0.0 6.073628791380323 0.0 10 4.470044888190767E-5 0.0 0.0 7.059005486533096 0.0 11 4.470044888190767E-5 0.0 0.0 8.08353977490642 0.0 12 4.470044888190767E-5 0.0 0.0 8.852298094777467 0.0 13 4.470044888190767E-5 0.0 0.0 9.206727953962114 0.0 14 4.470044888190767E-5 0.0 0.0 9.361212705297987 0.0 15 4.470044888190767E-5 0.0 0.0 9.569695598883204 0.0 16 4.470044888190767E-5 0.0 0.0 9.993098250692633 0.0 17 4.470044888190767E-5 0.0 0.0 10.473717477070904 0.0 18 4.470044888190767E-5 0.0 0.0 11.03573622086313 0.0 19 4.470044888190767E-5 0.0 0.0 11.337419550367125 0.0 20 4.470044888190767E-5 0.0 0.0 11.65130610241588 0.0 21 4.470044888190767E-5 0.0 0.0 12.061656223151793 0.0 22 4.470044888190767E-5 0.0 0.0 12.505129376509199 0.0 23 4.470044888190767E-5 0.0 0.0 12.986374409171816 0.0 24 4.470044888190767E-5 0.0 0.0 13.329048050300521 0.0 25 4.470044888190767E-5 0.0 0.0 13.630552578008988 0.0 26 4.470044888190767E-5 0.0 0.0 13.908008264218989 0.0 27 4.470044888190767E-5 0.0 0.0 14.21241832110478 0.0 28 4.470044888190767E-5 0.0 0.0 14.519823308065659 0.0 29 4.470044888190767E-5 0.0 0.0 14.865268377025043 0.0 30 4.470044888190767E-5 0.0 0.0 15.252597766586772 0.0 31 4.470044888190767E-5 4.470044888190767E-5 0.0 15.584498599534937 0.0 32 4.470044888190767E-5 4.470044888190767E-5 0.0 15.892395291433516 0.0 33 4.470044888190767E-5 4.470044888190767E-5 0.0 16.205611336749044 0.0 34 4.470044888190767E-5 4.470044888190767E-5 0.0 16.536215856679632 0.0 35 4.470044888190767E-5 4.470044888190767E-5 0.0 16.898110690827558 0.0 36 4.470044888190767E-5 4.470044888190767E-5 0.0 17.217897702128724 0.0 37 4.470044888190767E-5 4.470044888190767E-5 0.0 17.54510498794429 0.0 38 4.470044888190767E-5 4.470044888190767E-5 0.0 17.904496596954825 0.0 39 4.470044888190767E-5 4.470044888190767E-5 0.0 18.43580613236518 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTATC 20 7.0347206E-4 45.0 26 TATCGTG 20 7.0347206E-4 45.0 1 AATCGCG 45 3.8562575E-10 45.0 1 GTAGCGT 25 3.891995E-5 44.999996 10 TCGACCG 25 3.891995E-5 44.999996 19 CGACGGT 830 0.0 44.18675 28 CGTTTTT 9090 0.0 42.99505 1 CGGTCTA 860 0.0 42.645348 31 TATAGCG 95 0.0 42.63158 1 TCACGAC 885 0.0 42.203392 25 GACGGTC 875 0.0 42.17143 29 TACGGGT 395 0.0 42.151897 4 ACGGTCT 875 0.0 41.914288 30 CACGACG 880 0.0 41.676136 26 GCTAGCG 60 3.6379788E-12 41.250004 1 GACGGGT 530 0.0 40.75472 4 TAGGGCG 980 0.0 40.637756 5 CTCACGA 920 0.0 40.597824 24 AAGGGTC 1265 0.0 40.55336 5 CTCGCAG 50 1.0822987E-9 40.499996 1 >>END_MODULE