##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547921_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1426779 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.339145025263196 31.0 31.0 33.0 30.0 34.0 2 31.713348037783007 31.0 31.0 34.0 30.0 34.0 3 31.74518758686524 31.0 31.0 34.0 30.0 34.0 4 35.54704968323756 37.0 35.0 37.0 33.0 37.0 5 35.456092359082945 37.0 35.0 37.0 33.0 37.0 6 35.520306228224555 37.0 35.0 37.0 33.0 37.0 7 35.923911131296435 37.0 35.0 37.0 35.0 37.0 8 35.935570960884625 37.0 35.0 37.0 35.0 37.0 9 37.70268626045099 39.0 37.0 39.0 35.0 39.0 10 37.17211495263107 39.0 37.0 39.0 33.0 39.0 11 36.79533340482303 39.0 35.0 39.0 32.0 39.0 12 36.07745418176186 37.0 35.0 39.0 32.0 39.0 13 35.8025833012681 37.0 35.0 39.0 31.0 39.0 14 36.83774571955433 39.0 35.0 41.0 31.0 41.0 15 37.090273265866685 39.0 35.0 41.0 32.0 41.0 16 37.21845289284465 39.0 35.0 41.0 32.0 41.0 17 37.16241618358554 38.0 35.0 41.0 32.0 41.0 18 37.07036899197423 38.0 35.0 41.0 32.0 41.0 19 36.99101052090057 38.0 35.0 41.0 32.0 41.0 20 36.80764715488523 38.0 35.0 40.0 32.0 41.0 21 36.667199335005634 38.0 35.0 40.0 32.0 41.0 22 36.55591440580496 38.0 35.0 40.0 31.0 41.0 23 36.44805257156154 38.0 35.0 40.0 31.0 41.0 24 36.37669604052204 38.0 35.0 40.0 31.0 41.0 25 36.37279354405973 38.0 35.0 40.0 31.0 41.0 26 36.25657652656788 38.0 35.0 40.0 31.0 41.0 27 36.17845090234717 37.0 35.0 40.0 31.0 41.0 28 36.14773836732949 37.0 35.0 40.0 31.0 41.0 29 36.155609943796485 37.0 35.0 40.0 31.0 41.0 30 36.0860287402604 37.0 35.0 40.0 31.0 41.0 31 35.91088038161481 37.0 35.0 40.0 30.0 41.0 32 35.685952764934164 37.0 34.0 40.0 30.0 41.0 33 35.523230297053715 37.0 34.0 40.0 29.0 41.0 34 35.38072259263698 37.0 34.0 40.0 29.0 41.0 35 35.267170318598744 37.0 34.0 40.0 29.0 41.0 36 35.10352128816025 37.0 34.0 40.0 27.0 41.0 37 34.960916862387236 37.0 34.0 40.0 27.0 41.0 38 34.883440252484796 36.0 34.0 40.0 27.0 41.0 39 34.81789260985759 36.0 34.0 40.0 26.0 41.0 40 34.61031315992175 36.0 34.0 40.0 25.0 41.0 41 34.54508371653914 36.0 34.0 40.0 24.0 41.0 42 34.51601264106074 36.0 34.0 40.0 24.0 41.0 43 34.425039897559465 36.0 34.0 40.0 24.0 41.0 44 34.2632503001516 35.0 34.0 40.0 24.0 41.0 45 34.11661091171092 35.0 33.0 40.0 23.0 41.0 46 34.03380691753944 35.0 33.0 40.0 23.0 41.0 47 33.96381429779945 35.0 33.0 40.0 23.0 41.0 48 33.841759655840185 35.0 33.0 40.0 23.0 41.0 49 33.70241992628151 35.0 33.0 40.0 23.0 41.0 50 33.54677634027414 35.0 33.0 39.0 22.0 41.0 51 33.19825565136577 35.0 33.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 9.0 14 19.0 15 50.0 16 108.0 17 237.0 18 536.0 19 1055.0 20 1900.0 21 3286.0 22 5108.0 23 7983.0 24 12107.0 25 17608.0 26 22187.0 27 25150.0 28 27378.0 29 31759.0 30 37778.0 31 45948.0 32 57109.0 33 75986.0 34 132400.0 35 209377.0 36 114068.0 37 129338.0 38 179225.0 39 289025.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.47418065446716 25.308334367130435 30.51853160160053 12.698953376801873 2 30.376393260624106 27.770103148420322 29.264798542731562 12.588705048224005 3 28.257775030330556 25.776942329540876 33.14760029408899 12.817682346039577 4 24.65882943328995 29.99455416711348 31.42925428535183 13.917362114244744 5 23.337040985324286 33.27740315774202 29.991049770146606 13.394506086787091 6 20.893284804444136 41.71788342833754 27.12571463415147 10.263117133066858 7 86.4805972053135 4.331224387238668 7.293210791580195 1.894967615867629 8 86.11452789815381 3.8624061610102194 6.87226262791925 3.150803312916717 9 82.06596817026323 6.2493911110270055 8.824912617861632 2.8597281008481343 10 47.03384336326789 31.006343659389437 12.21044043961959 9.749372537723081 11 38.00392352284411 24.53470369272326 23.834104651105743 13.627268133326886 12 34.84597124011497 25.9893788736728 24.327103216405625 14.837546669806606 13 20.373792998074684 40.16964084837245 25.735940885028448 13.720625268524417 14 15.001342184038313 44.074310036803176 25.956157190426826 14.96819058873168 15 13.086049065762811 30.83764198940411 41.42050030172858 14.655808643104503 16 15.452287985735701 27.902709529646845 40.66320011718704 15.981802367430415 17 15.872745533821286 28.31987294458357 26.157099312507405 29.65028220908774 18 18.44630457835446 30.75388690189581 31.94124668221217 18.858561837537557 19 24.001544738182996 32.041682699282795 24.876873012568872 19.079899549965344 20 26.24597081958734 31.35979713746838 24.342102035423846 18.052130007520436 21 20.01340081400133 35.075088713809215 27.04287068985456 17.868639782334895 22 21.322433257007567 30.615883749340295 24.387869459811228 23.67381353384091 23 17.40241480986193 35.378849842897885 23.850785580668063 23.367949766572117 24 17.719772999182073 31.78782418300241 34.147544924616916 16.344857893198597 25 15.63360548480178 33.107159553091265 31.466541069079373 19.792693893027582 26 15.340147282795725 39.98278640209871 25.59800782041227 19.079058494693292 27 16.603131949657236 40.157095107231044 26.629702287460077 16.610070655651647 28 14.13799894727915 36.087438909599875 33.44757667445344 16.326985468667537 29 14.470846571192874 31.229784009997342 33.11346746763164 21.185901951178142 30 17.61583258514458 36.62977938419335 29.058810089018692 16.69557794164338 31 24.16407866950663 35.19528952977301 23.56720977810859 17.07342202261177 32 24.467559446837946 34.77076688120585 25.491684416437305 15.269989255518897 33 23.845178545521065 35.78423848402591 22.490729117824134 17.879853852628894 34 18.662876310907293 34.893490862985786 26.31164321874656 20.131989607360353 35 17.551281593014757 34.57290862845612 27.30254650509995 20.57326327342917 36 26.251507766794997 32.257413376563576 24.932102308766808 16.558976547874618 37 18.55515114814558 36.64491837909025 27.644155121430856 17.155775351333318 38 18.614025017189068 38.00392352284411 23.277676500705436 20.104374959261385 39 19.878481530776664 35.8117129562462 25.355924077940596 18.95388143503654 40 22.776828086199753 32.592573902475436 23.5279605320796 21.10263747924521 41 17.269738340696072 31.414886257787643 25.841353145792024 25.474022255724254 42 20.12287817524648 32.19061957037495 23.971617188085894 23.714885066292677 43 19.94022900533299 31.995004131684023 25.799230294250197 22.265536568732788 44 18.750766586836505 35.557574088208476 24.833488578118963 20.858170746836056 45 17.283545664745557 40.08721743171157 21.6723122501803 20.956924653362574 46 22.069290338587827 35.85096220227519 24.572761443783513 17.506986015353466 47 20.203969921059954 33.556913859819915 25.19983823703601 21.03927798208412 48 20.67040515735093 30.645811299437405 28.105333762271524 20.578449780940144 49 20.85782030713937 28.46684735337428 28.426476700315884 22.24885563917047 50 18.982126874589547 34.57963707063252 26.151492277360404 20.286743777417527 51 17.50130889226713 35.46078264398341 23.6038657703821 23.434042693367367 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2392.0 1 2535.5 2 2679.0 3 9063.0 4 15447.0 5 11138.5 6 6830.0 7 7368.5 8 7907.0 9 9997.0 10 12087.0 11 14208.0 12 16329.0 13 16829.0 14 17329.0 15 16446.0 16 15563.0 17 14259.0 18 12955.0 19 12203.5 20 11452.0 21 10482.0 22 9512.0 23 9455.5 24 9399.0 25 9758.0 26 11732.5 27 13348.0 28 15918.0 29 18488.0 30 21089.5 31 23691.0 32 27431.0 33 31171.0 34 35082.0 35 38993.0 36 44097.0 37 49201.0 38 57976.5 39 66752.0 40 84781.5 41 102811.0 42 127391.0 43 151971.0 44 161604.5 45 171238.0 46 169141.5 47 167045.0 48 150639.0 49 134233.0 50 115567.5 51 96902.0 52 81720.0 53 66538.0 54 56486.5 55 46435.0 56 39986.5 57 33538.0 58 28638.0 59 23738.0 60 20211.5 61 16685.0 62 13541.5 63 10398.0 64 8086.5 65 5775.0 66 4525.5 67 3276.0 68 2502.5 69 1729.0 70 1381.0 71 1033.0 72 795.5 73 558.0 74 501.5 75 345.5 76 246.0 77 221.5 78 197.0 79 166.5 80 136.0 81 111.0 82 86.0 83 58.0 84 30.0 85 28.5 86 27.0 87 21.5 88 16.0 89 14.5 90 13.0 91 12.5 92 12.0 93 11.5 94 11.0 95 13.0 96 15.0 97 7.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1426779.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.810002254611383 #Duplication Level Percentage of deduplicated Percentage of total 1 75.65746245653894 21.04034201494524 2 9.94031800806678 5.528805324317825 3 3.9071691016260623 3.259751445761062 4 2.0286070382809647 2.2566226523325663 5 1.266447104071283 1.7609948409784222 6 0.8456103781046156 1.4109855912967286 7 0.646270683014403 1.2580952406203847 8 0.47930641426681686 1.0663609969127898 9 0.38042608349919893 0.952168521584313 >10 3.320357929068294 20.727158290383958 >50 1.0887889313741275 21.945411347697995 >100 0.43285533938358994 16.282419556992927 >500 0.0040835409312390885 0.7339736902372644 >1k 0.0020417704656195443 0.9123390208209842 >5k 0.0 0.0 >10k+ 2.5522130820244303E-4 0.8645714651175048 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12181 0.8537411890699261 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2740 0.19204095378471367 No Hit CTGTCTCTTATACACATCTGACGCTATAGGACTCGTATGCCGTCTTCTGCT 2179 0.1527216198163836 TruSeq Adapter, Index 21 (95% over 23bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1932 0.13540989880002438 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1840509287002402 0.0 2 0.0 0.0 0.0 0.5323178992682118 0.0 3 0.0 0.0 0.0 0.811548249588759 0.0 4 0.0 0.0 0.0 1.310784641489677 0.0 5 0.0 0.0 0.0 2.216881521244706 0.0 6 0.0 0.0 0.0 3.254533463136197 0.0 7 0.0 0.0 0.0 3.8858856206882777 0.0 8 0.0 0.0 0.0 5.272295148723103 0.0 9 0.0 0.0 0.0 5.8167382614967 0.0 10 0.0 0.0 0.0 6.680712289709899 0.0 11 0.0 0.0 0.0 7.9538597077753455 0.0 12 7.008793933748675E-5 0.0 0.0 8.847691198146315 0.0 13 7.008793933748675E-5 0.0 0.0 9.218596573120294 0.0 14 7.008793933748675E-5 0.0 0.0 9.372790039662766 0.0 15 7.008793933748675E-5 0.0 0.0 9.59097379482036 0.0 16 7.008793933748675E-5 0.0 0.0 10.059301405473448 0.0 17 7.008793933748675E-5 0.0 0.0 10.66016530941372 0.0 18 7.008793933748675E-5 0.0 0.0 11.389991021734971 0.0 19 7.008793933748675E-5 0.0 0.0 11.818158243147677 0.0 20 7.008793933748675E-5 0.0 0.0 12.227822248575288 0.0 21 7.008793933748675E-5 0.0 0.0 12.723273891751981 0.0 22 7.008793933748675E-5 0.0 0.0 13.280683273303014 0.0 23 7.008793933748675E-5 0.0 0.0 13.856806134657154 0.0 24 7.008793933748675E-5 0.0 0.0 14.304948418781045 0.0 25 7.008793933748675E-5 0.0 0.0 14.647328002444667 0.0 26 7.008793933748675E-5 0.0 0.0 14.989287058472264 0.0 27 7.008793933748675E-5 0.0 0.0 15.313794217604828 0.0 28 7.008793933748675E-5 0.0 0.0 15.654071163088327 0.0 29 7.008793933748675E-5 0.0 0.0 16.02932199030123 0.0 30 7.008793933748675E-5 0.0 0.0 16.511737276761153 0.0 31 7.008793933748675E-5 0.0 0.0 16.93794203587241 0.0 32 7.008793933748675E-5 0.0 0.0 17.322864998713886 0.0 33 7.008793933748675E-5 0.0 0.0 17.704143388709813 0.0 34 7.008793933748675E-5 0.0 0.0 18.105957544931627 0.0 35 7.008793933748675E-5 0.0 0.0 18.563982228502102 0.0 36 7.008793933748675E-5 0.0 0.0 18.99593419863903 0.0 37 7.008793933748675E-5 0.0 0.0 19.41456946030184 0.0 38 7.008793933748675E-5 0.0 0.0 19.822411179306677 0.0 39 7.008793933748675E-5 0.0 0.0 20.241326792726834 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTAGCG 35 1.2122109E-7 45.000004 1 TAACGAC 30 2.1658707E-6 45.000004 22 GCGATCG 30 2.1658707E-6 45.000004 9 TGATCGC 20 7.033859E-4 45.0 28 CTATGCG 45 3.8562575E-10 45.0 1 CTCACGG 40 6.8175723E-9 45.0 2 GACCGTT 20 7.033859E-4 45.0 23 GCTATCG 20 7.033859E-4 45.0 41 CCTCGCG 45 3.8562575E-10 45.0 20 TAGTTCG 20 7.033859E-4 45.0 1 CCCGTAG 40 6.8175723E-9 45.0 43 CTAAACG 55 1.8189894E-12 45.0 1 CTACGCT 20 7.033859E-4 45.0 40 TGTTACG 20 7.033859E-4 45.0 1 GCGGCCC 20 7.033859E-4 45.0 38 CGCCGTT 20 7.033859E-4 45.0 26 GTGACCG 20 7.033859E-4 45.0 9 CGATCGT 20 7.033859E-4 45.0 10 TCGACTG 20 7.033859E-4 45.0 1 GCGTCGC 20 7.033859E-4 45.0 9 >>END_MODULE