##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547917_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2166807 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.334410494335675 31.0 31.0 33.0 30.0 34.0 2 31.69572555377567 31.0 31.0 34.0 30.0 34.0 3 31.521708209360593 31.0 31.0 34.0 30.0 34.0 4 35.45401736287542 37.0 35.0 37.0 33.0 37.0 5 35.46399240910704 37.0 35.0 37.0 33.0 37.0 6 35.55966821225887 37.0 35.0 37.0 33.0 37.0 7 35.937057153682815 37.0 35.0 37.0 35.0 37.0 8 35.962123530152894 37.0 35.0 37.0 35.0 37.0 9 37.729253228367824 39.0 38.0 39.0 35.0 39.0 10 37.21220533254692 39.0 37.0 39.0 33.0 39.0 11 36.93648211400462 39.0 37.0 39.0 33.0 39.0 12 36.614556349504134 39.0 35.0 39.0 32.0 39.0 13 36.52258553715213 39.0 35.0 39.0 32.0 39.0 14 37.65069108600812 40.0 36.0 41.0 32.0 41.0 15 37.795067581007444 40.0 36.0 41.0 33.0 41.0 16 37.84996494842411 40.0 36.0 41.0 33.0 41.0 17 37.781913202237206 40.0 36.0 41.0 33.0 41.0 18 37.60678177613419 39.0 36.0 41.0 33.0 41.0 19 37.459934364251176 39.0 36.0 41.0 32.0 41.0 20 37.23253201600327 39.0 35.0 41.0 32.0 41.0 21 37.12668641000329 39.0 35.0 41.0 32.0 41.0 22 37.05024351499695 39.0 35.0 41.0 32.0 41.0 23 36.90302643474938 38.0 35.0 41.0 32.0 41.0 24 36.868518977463154 38.0 35.0 41.0 32.0 41.0 25 36.858701767162465 38.0 35.0 41.0 32.0 41.0 26 36.757773996484225 38.0 35.0 41.0 31.0 41.0 27 36.67951414223786 38.0 35.0 41.0 31.0 41.0 28 36.60208731096032 38.0 35.0 41.0 31.0 41.0 29 36.573183952239404 38.0 35.0 41.0 31.0 41.0 30 36.46102121693349 38.0 35.0 40.0 31.0 41.0 31 36.236888195395345 38.0 35.0 40.0 30.0 41.0 32 35.90954108972326 38.0 35.0 40.0 30.0 41.0 33 35.64772173986885 38.0 35.0 40.0 28.0 41.0 34 35.346390795303876 38.0 34.0 40.0 25.0 41.0 35 35.16008393917871 38.0 34.0 40.0 25.0 41.0 36 35.02668119495645 38.0 34.0 40.0 24.0 41.0 37 34.93406888569217 38.0 34.0 40.0 24.0 41.0 38 34.82283009054337 38.0 34.0 40.0 23.0 41.0 39 34.763930059299234 38.0 34.0 40.0 23.0 41.0 40 34.64865860226592 38.0 34.0 40.0 23.0 41.0 41 34.52396175570782 38.0 34.0 40.0 22.0 41.0 42 34.492850078479535 38.0 34.0 40.0 22.0 41.0 43 34.410832621456365 38.0 34.0 40.0 22.0 41.0 44 34.270521093941454 37.0 33.0 40.0 21.0 41.0 45 34.16809849700504 37.0 33.0 40.0 21.0 41.0 46 34.10657986613482 37.0 33.0 40.0 21.0 41.0 47 34.03282110497151 37.0 33.0 40.0 20.0 41.0 48 33.85873038069381 37.0 33.0 40.0 20.0 41.0 49 33.71790657866621 37.0 33.0 40.0 20.0 41.0 50 33.62193587153816 36.0 33.0 40.0 19.0 41.0 51 33.33725246410963 36.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 4.0 13 6.0 14 22.0 15 55.0 16 153.0 17 355.0 18 834.0 19 1791.0 20 3112.0 21 5261.0 22 8259.0 23 13044.0 24 20630.0 25 32776.0 26 44031.0 27 47421.0 28 47073.0 29 48054.0 30 53840.0 31 62672.0 32 76319.0 33 95884.0 34 147692.0 35 213602.0 36 172517.0 37 209413.0 38 312887.0 39 549011.0 40 84.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.83999359426105 24.162050427195407 28.707032975248836 18.290923003294708 2 36.15158156679391 23.560520157079058 27.896531624644005 12.391366651483034 3 27.38282643539549 23.65517556478265 36.23193020882801 12.730067790993846 4 23.81854959855677 26.56406408138796 36.01183677180293 13.605549548252336 5 21.781773826649072 30.500270674776296 34.18472434323869 13.53323115533594 6 20.185831040789513 38.9857979967759 30.5335454426721 10.294825519762488 7 83.75559059943963 2.726546480604872 11.744746994079307 1.7731159258761855 8 84.11616724516766 2.1429688938608744 11.483394690897713 2.2574691700737537 9 79.03361951479758 5.14531289588782 13.142979508557984 2.6780880807566154 10 34.942890622007404 37.43692908505464 17.818153624203724 9.802026668734225 11 26.170489572906124 23.99498432486142 34.0789004281415 15.755625674090956 12 26.056312352692235 22.326630844371465 34.019688878612634 17.59736792432367 13 21.173182475411977 27.45334494488895 34.98285726416797 16.3906153155311 14 16.245332417700332 31.50022129335931 34.63907953038734 17.615366758553023 15 15.014535212411628 27.62516458549377 41.270219267336685 16.090080934757918 16 18.591688138352886 26.245530866385426 39.5193480545337 15.643432940727992 17 18.517708314584546 25.698412456670116 33.972061194190346 21.811818034554992 18 18.75358534470306 27.37262709599886 35.673504839148116 18.20028272014997 19 21.069019991166726 28.910419802040515 32.32973679704745 17.690823409745306 20 22.2950636581846 28.868837879885014 31.376121638890776 17.459976823039618 21 20.310530656399024 28.838424465123104 33.84085430774407 17.0101905707338 22 19.714492338265472 25.748947645083298 33.435926688440645 21.100633328210588 23 16.48462461123672 30.101573421167643 33.1562986458877 20.257503321707933 24 17.316401506917785 28.39740687564698 36.93669994604965 17.349491671385593 25 18.082598034804207 29.50959637844995 33.90080427098491 18.50700131576093 26 17.52048059656444 32.27537108750341 31.290050290588873 18.914098025343282 27 17.537464111939826 31.244176338732522 33.60017758849773 17.618181960829922 28 16.476640512976008 29.78580925758501 36.17927208099291 17.558278148446078 29 17.44710073393708 27.584459529621235 35.28449926550911 19.683940470932576 30 19.786718429467875 28.85319273936257 33.965461621639584 17.39462720952997 31 22.153334376342702 28.284983387999024 31.48540686826284 18.076275367395432 32 22.54986253967243 28.993814400636513 31.557217601752257 16.899105457938802 33 21.45904088365969 29.398280511369958 31.249668290715327 17.89301031425503 34 18.17314601623495 29.561100734860098 33.384745388029486 18.881007860875474 35 18.029247644114125 29.82637586088655 33.085410929538256 19.058965565461065 36 21.296682168739533 29.331546372150356 31.429656633008847 17.942114826101264 37 17.768726056358503 32.18076183065681 32.48734197369678 17.5631701392879 38 17.6909618623163 32.253910938999184 30.603971650451562 19.451155548232954 39 17.4409165190993 31.783679857043108 31.09501676891389 19.680386854943702 40 19.86605175264802 29.43907786895649 31.040466455941857 19.65440392245364 41 17.60710575515032 28.937879561954528 31.511666705894896 21.943347977000258 42 19.51129011490179 30.349772730104714 29.70412224069795 20.43481491429555 43 19.384882917583337 29.87940319557764 30.646661193175028 20.089052693663994 44 19.01332236788971 31.443317286680355 30.30339111882138 19.23996922660855 45 18.11305760042311 32.451575059523066 29.335146138996226 20.100221201057593 46 20.129896202107524 30.655291403433715 29.741689038294595 19.473123356164162 47 19.484430316128755 30.06654492070591 30.340450256991048 20.108574506174293 48 19.19358761532522 29.398188209655956 31.164289205268396 20.24393496975042 49 19.390421020423137 28.338149175261112 31.163596942413424 21.107832861902327 50 18.12118015125482 30.304867946245327 31.383644228581502 20.19030767391835 51 17.40376507921564 30.955271973922923 30.372340499176897 21.268622447684542 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1642.0 1 2298.5 2 2955.0 3 32059.0 4 61163.0 5 41664.0 6 22165.0 7 20662.5 8 19160.0 9 21098.5 10 23037.0 11 24552.0 12 26067.0 13 26825.5 14 27584.0 15 26594.5 16 25605.0 17 24162.0 18 22719.0 19 21161.5 20 19604.0 21 19431.5 22 19259.0 23 19816.0 24 20373.0 25 22117.5 26 26298.5 27 28735.0 28 33224.5 29 37714.0 30 42422.5 31 47131.0 32 54055.0 33 60979.0 34 68651.5 35 76324.0 36 80258.5 37 84193.0 38 93079.0 39 101965.0 40 118669.5 41 135374.0 42 150526.5 43 165679.0 44 183851.5 45 202024.0 46 202747.0 47 203470.0 48 191259.0 49 179048.0 50 159541.0 51 140034.0 52 122229.5 53 104425.0 54 91863.5 55 79302.0 56 71224.5 57 63147.0 58 55515.5 59 47884.0 60 41377.0 61 34870.0 62 28773.0 63 22676.0 64 19072.5 65 15469.0 66 11930.0 67 8391.0 68 6661.0 69 4931.0 70 4051.0 71 3171.0 72 2620.0 73 2069.0 74 1552.0 75 852.0 76 669.0 77 541.0 78 413.0 79 304.5 80 196.0 81 168.0 82 140.0 83 115.0 84 90.0 85 57.5 86 25.0 87 21.0 88 17.0 89 13.5 90 10.0 91 9.0 92 8.0 93 6.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2166807.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.41793383240857 #Duplication Level Percentage of deduplicated Percentage of total 1 74.74421522826155 20.493319474837804 2 8.613697251250679 4.723395625743814 3 3.6985313437851226 3.0421826298296892 4 2.111886025208092 2.316142052029752 5 1.3975972990956596 1.9159615135478862 6 0.979181475624895 1.6108279745162133 7 0.7411904349632881 1.4225337212126292 8 0.5818830470583418 1.276322470595672 9 0.4768838399630107 1.1767652612865669 >10 5.51124548910509 34.28246373567956 >50 0.9969410760770051 18.79780261193773 >100 0.14247175889111638 5.212767351110603 >500 0.0022233799724221746 0.4354454333957383 >1k 0.0018813215151264556 1.148120395354432 >5k 0.0 0.0 >10k+ 1.7102922864785958E-4 2.145949748921944 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45763 2.112001668814989 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT 3871 0.17864996744057038 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3702 0.17085047260785108 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 2947 0.13600657557410512 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT 2767 0.1276994213144041 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2493 0.1150540864968592 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.230171399667806E-5 0.0 0.0 0.1005165665423824 0.0 2 9.230171399667806E-5 0.0 0.0 0.2953654847893698 0.0 3 9.230171399667806E-5 0.0 0.0 0.49759854015609145 0.0 4 9.230171399667806E-5 0.0 0.0 0.707446486927539 0.0 5 9.230171399667806E-5 0.0 0.0 1.2979928530782852 0.0 6 9.230171399667806E-5 0.0 0.0 2.32231112415642 0.0 7 9.230171399667806E-5 0.0 0.0 3.035203412209763 0.0 8 9.230171399667806E-5 0.0 0.0 4.239971534151404 0.0 9 9.230171399667806E-5 0.0 0.0 4.945341232514017 0.0 10 9.230171399667806E-5 0.0 0.0 5.709276368407523 0.0 11 9.230171399667806E-5 0.0 0.0 6.395678064543819 0.0 12 9.230171399667806E-5 0.0 0.0 6.932689436576492 0.0 13 9.230171399667806E-5 0.0 0.0 7.207471639144603 0.0 14 9.230171399667806E-5 0.0 0.0 7.365169117507928 0.0 15 9.230171399667806E-5 0.0 0.0 7.503852442787936 0.0 16 9.230171399667806E-5 0.0 0.0 7.741898563185369 0.0 17 9.230171399667806E-5 0.0 0.0 8.031818246848935 0.0 18 9.230171399667806E-5 0.0 0.0 8.389302785158069 0.0 19 9.230171399667806E-5 0.0 0.0 8.616088096447907 0.0 20 9.230171399667806E-5 0.0 0.0 8.842919558594744 0.0 21 9.230171399667806E-5 0.0 0.0 9.095641651517647 0.0 22 9.230171399667806E-5 0.0 0.0 9.385561335181213 0.0 23 9.230171399667806E-5 0.0 0.0 9.68964933194327 0.0 24 9.230171399667806E-5 0.0 0.0 9.932310538040536 0.0 25 9.230171399667806E-5 0.0 0.0 10.134405140836263 0.0 26 9.230171399667806E-5 0.0 0.0 10.33285382592912 0.0 27 9.230171399667806E-5 0.0 0.0 10.54237871670158 0.0 28 9.230171399667806E-5 0.0 0.0 10.763856679436609 0.0 29 9.230171399667806E-5 0.0 0.0 11.005733320964904 0.0 30 9.230171399667806E-5 0.0 0.0 11.317205454846693 0.0 31 9.230171399667806E-5 0.0 0.0 11.57320425861648 0.0 32 9.230171399667806E-5 0.0 0.0 11.82491103268542 0.0 33 9.230171399667806E-5 0.0 0.0 12.070756647915573 0.0 34 9.230171399667806E-5 0.0 0.0 12.323940249408462 0.0 35 9.230171399667806E-5 0.0 0.0 12.599368563974549 0.0 36 9.230171399667806E-5 0.0 0.0 12.85744415630926 0.0 37 9.230171399667806E-5 0.0 0.0 13.121519360053757 0.0 38 9.230171399667806E-5 0.0 0.0 13.40230117403165 0.0 39 9.230171399667806E-5 0.0 0.0 13.766662190033538 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 60 0.0 45.000004 1 CGACTCA 25 3.8919527E-5 45.000004 42 CTACGCG 35 1.2125929E-7 45.0 1 CGTTTTT 17870 0.0 43.904587 1 CGACGGT 450 0.0 42.0 28 AGGGCGA 1685 0.0 41.52819 6 TCGCACG 55 6.184564E-11 40.909092 1 CGATCGT 50 1.0822987E-9 40.500004 10 CGGTTTT 1375 0.0 40.254543 1 CGGTCTA 470 0.0 40.212765 31 GACCGTT 45 1.929584E-8 40.0 9 GGGCGAT 3235 0.0 39.85317 7 CACGACG 475 0.0 39.789474 26 TATAGCG 120 0.0 39.375004 1 ATGACGG 155 0.0 39.193546 2 GGCGATA 735 0.0 39.183674 8 TCACGAC 500 0.0 39.149998 25 TACGGGA 1055 0.0 39.02844 4 TAGGGAC 2810 0.0 38.994663 5 CGTAAGG 295 0.0 38.898304 2 >>END_MODULE