##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547915_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1546791 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38597522225045 31.0 31.0 33.0 30.0 34.0 2 31.72648340984658 31.0 31.0 34.0 30.0 34.0 3 31.419397319999923 31.0 31.0 34.0 28.0 34.0 4 35.41690894244924 37.0 35.0 37.0 33.0 37.0 5 35.46683359290299 37.0 35.0 37.0 33.0 37.0 6 35.560741561077094 37.0 35.0 37.0 33.0 37.0 7 35.96774224830633 37.0 35.0 37.0 35.0 37.0 8 36.0022995996227 37.0 35.0 37.0 35.0 37.0 9 37.73107420459519 39.0 38.0 39.0 35.0 39.0 10 37.27603212069375 39.0 37.0 39.0 34.0 39.0 11 36.98646811366241 39.0 37.0 39.0 33.0 39.0 12 36.5062183578777 39.0 35.0 39.0 32.0 39.0 13 36.340906431444196 39.0 35.0 39.0 32.0 39.0 14 37.435670365291756 40.0 35.0 41.0 32.0 41.0 15 37.61249709883236 40.0 35.0 41.0 33.0 41.0 16 37.70646260548452 40.0 35.0 41.0 33.0 41.0 17 37.63770477071563 40.0 35.0 41.0 33.0 41.0 18 37.4333507241767 39.0 36.0 41.0 33.0 41.0 19 37.23709796604712 38.0 35.0 41.0 32.0 41.0 20 36.963885230777784 38.0 35.0 41.0 32.0 41.0 21 36.85281592665073 38.0 35.0 41.0 32.0 41.0 22 36.74956926953932 38.0 35.0 41.0 32.0 41.0 23 36.64203050056536 38.0 35.0 40.0 32.0 41.0 24 36.58940671364134 38.0 35.0 40.0 32.0 41.0 25 36.499701640363824 38.0 35.0 40.0 31.0 41.0 26 36.35383901251042 38.0 35.0 40.0 31.0 41.0 27 36.2321095739502 38.0 35.0 40.0 31.0 41.0 28 36.13037766576092 37.0 35.0 40.0 31.0 41.0 29 36.0963297562502 37.0 35.0 40.0 31.0 41.0 30 35.95485621522236 37.0 35.0 40.0 30.0 41.0 31 35.722140871003255 37.0 35.0 40.0 30.0 41.0 32 35.41892860767874 37.0 34.0 40.0 29.0 41.0 33 35.17937006357032 37.0 34.0 40.0 27.0 41.0 34 34.932939227083686 37.0 34.0 40.0 25.0 41.0 35 34.714671212852934 36.0 34.0 40.0 24.0 41.0 36 34.56116178591678 36.0 34.0 40.0 23.0 41.0 37 34.435025805037654 36.0 34.0 40.0 23.0 41.0 38 34.29702138168634 36.0 33.0 40.0 23.0 41.0 39 34.19768992708129 36.0 33.0 40.0 23.0 41.0 40 34.04566098458034 36.0 33.0 40.0 22.0 41.0 41 33.94200638612456 36.0 33.0 40.0 21.0 41.0 42 33.843852207570386 35.0 33.0 40.0 21.0 41.0 43 33.7553069548504 35.0 33.0 40.0 21.0 41.0 44 33.566667377816394 35.0 33.0 40.0 20.0 41.0 45 33.435229452459964 35.0 33.0 40.0 20.0 41.0 46 33.397790651742866 35.0 33.0 40.0 20.0 41.0 47 33.31653597674153 35.0 33.0 40.0 20.0 41.0 48 33.187150688102015 35.0 33.0 40.0 19.0 41.0 49 33.0560146781304 35.0 33.0 40.0 18.0 41.0 50 32.94465509561408 35.0 32.0 39.0 18.0 41.0 51 32.64293947921859 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 3.0 12 3.0 13 9.0 14 19.0 15 57.0 16 122.0 17 337.0 18 810.0 19 1495.0 20 2718.0 21 4395.0 22 6528.0 23 10342.0 24 15880.0 25 24194.0 26 32051.0 27 35529.0 28 36084.0 29 36951.0 30 40818.0 31 47241.0 32 57738.0 33 73988.0 34 122686.0 35 195907.0 36 141105.0 37 141233.0 38 191260.0 39 327251.0 40 36.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.12805220614808 23.47737994337955 26.07314110309667 20.321426747375696 2 36.920243264927194 24.062526870145998 26.520454282446693 12.496775582480115 3 26.655378780972995 23.93193391996721 36.469438986909026 12.943248312150768 4 22.556441044717744 26.698241714620785 36.755967677598335 13.989349563063142 5 21.47691575655664 30.200524828499773 35.22285816247961 13.099701252463971 6 19.903335356877562 38.04967833404771 31.89416023237787 10.15282607669685 7 81.16422968584638 2.9182998866685934 13.726935313174177 2.190535114310854 8 81.0412007827819 2.476158705345454 13.661768138035454 2.8208723738371893 9 76.10614491550571 4.921350072504947 15.664753673896472 3.3077513380928645 10 40.535922435545594 29.082985354841085 20.357824683489884 10.023267526123439 11 30.594243178296228 22.32822663178154 31.458677998514347 15.618852191407889 12 28.369896126884626 22.328291281756876 32.481957808133096 16.8198547832254 13 20.551257409695296 30.535476350715772 33.497608920662195 15.415657318926732 14 15.258816478761513 34.53769772386831 33.76991461677758 16.433571180592594 15 13.727775762853547 28.11420547443061 43.098776757816665 15.059242004899176 16 16.819790133250066 26.40401967686649 41.46597698072978 15.31021320915366 17 16.60140251656494 27.1877066778899 32.26822498967217 23.942665815872992 18 17.99182953611703 28.682737357535697 35.46167517137092 17.86375793497635 19 21.283353730400552 30.56269399033224 30.158631644482025 17.995320634785177 20 22.727569529432223 30.281078697768475 29.327426911586635 17.663924861212664 21 19.23873361042313 32.029795880632875 31.599679594722236 17.131790914221767 22 19.44703583095583 28.540959961623773 31.023066464700143 20.98893774272025 23 16.360322758536867 32.2761769366385 30.92641475157277 20.437085553251862 24 17.15655185477547 29.886455248317322 36.06220879226735 16.894784104639864 25 17.19741063918784 30.057583733031805 33.99108218240215 18.753923445378206 26 15.814095116922713 34.38564098187796 30.268019402750596 19.532244498448723 27 17.075674735630088 32.86112991347893 32.020680234110486 18.042515116780482 28 15.555107315726561 31.18145890427343 35.77781355076413 17.48562022923588 29 15.750996740994744 29.231227748286614 34.663441925896905 20.354333584821738 30 17.15765090435618 30.850257080626925 32.95519562759287 19.03689638742403 31 21.92306523635061 29.507671042823496 29.8812186003151 18.688045120510786 32 22.36488316779707 29.777326089950094 29.21700475371269 18.640785988540145 33 20.32899079449001 30.062303181231336 29.331823109909482 20.276882914369168 34 17.324383190747813 30.436432588500967 30.94522789439556 21.293956326355662 35 16.704842477102595 30.464167427920124 31.757813434394173 21.073176660583105 36 21.189546616187965 30.72089247997952 29.433840770989743 18.655720132842767 37 17.448123243540984 33.655548810408135 30.71210008333382 18.18422786271707 38 16.886961457624203 35.217427564551386 28.311581849131525 19.584029128692887 39 16.563711580944034 34.54086557265978 29.027644975953443 19.867777870442744 40 19.58105522982743 31.720833648501962 28.813201007763816 19.88491011390679 41 16.456715871762896 30.51233165954547 30.064565930368097 22.966386538323537 42 18.434940467070213 32.26563899065872 28.393687317808286 20.905733224462775 43 18.847730559590794 31.350841839653835 29.484720301579202 20.316707299176166 44 18.63367449125318 33.0047821586756 29.105418896282693 19.25612445378852 45 16.892973905330454 34.147211872838675 27.6439415538363 21.315872667994576 46 20.03638500611912 32.49773240211509 28.205426589629756 19.260456002136035 47 18.5902943578027 31.36053933595424 29.477220904440227 20.57194540180283 48 18.94735617158362 29.817861624485793 30.557004792502674 20.67777741142792 49 19.0673465258073 28.331170791658344 30.79291255250386 21.808570130030493 50 16.942043236610505 31.350259989875813 31.58855979896444 20.119136974549246 51 16.10560185571289 32.788786591077915 29.354450601277094 21.751160951932096 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1505.0 1 1989.0 2 2473.0 3 34327.5 4 66182.0 5 43128.0 6 20074.0 7 18203.5 8 16333.0 9 19558.5 10 22784.0 11 26659.5 12 30535.0 13 30778.5 14 31022.0 15 28838.5 16 26655.0 17 23650.0 18 20645.0 19 18645.5 20 16646.0 21 15604.0 22 14562.0 23 13926.5 24 13291.0 25 13582.5 26 15207.5 27 16541.0 28 18716.5 29 20892.0 30 23029.0 31 25166.0 32 27937.5 33 30709.0 34 33723.5 35 36738.0 36 39844.0 37 42950.0 38 46910.5 39 50871.0 40 63528.5 41 76186.0 42 88836.5 43 101487.0 44 108639.0 45 115791.0 46 123473.5 47 131156.0 48 131443.0 49 131730.0 50 121883.5 51 112037.0 52 97925.5 53 83814.0 54 74083.0 55 64352.0 56 59225.0 57 54098.0 58 48530.5 59 42963.0 60 38281.0 61 33599.0 62 29775.5 63 25952.0 64 22632.5 65 19313.0 66 15803.5 67 12294.0 68 10099.5 69 7905.0 70 6591.5 71 5278.0 72 4297.5 73 3317.0 74 2869.5 75 1808.0 76 1194.0 77 1015.0 78 836.0 79 579.0 80 322.0 81 230.5 82 139.0 83 102.5 84 66.0 85 54.5 86 43.0 87 32.5 88 22.0 89 19.5 90 17.0 91 10.5 92 4.0 93 3.0 94 2.0 95 2.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1546791.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.66802175142783 #Duplication Level Percentage of deduplicated Percentage of total 1 73.49459949909549 21.069447770525464 2 8.446619270487808 4.842957299447479 3 3.8329504103001857 3.2964931720388986 4 2.122353533527033 2.433747090534908 5 1.3551666128631854 1.9424972967185288 6 0.9666083510905978 1.6626449540506227 7 0.7574415928633316 1.5200046441749497 8 0.6230201646791386 1.4288604506079756 9 0.56282957081157 1.4521689340535595 >10 7.52567093598973 48.01136347746636 >50 0.26945439665174997 4.855330576067239 >100 0.03870516950680049 1.880937028541712 >500 0.0013741476399869582 0.2790415022324703 >1k 0.0027482952799739164 1.411096462583589 >5k 2.29024606664493E-4 0.33629425280816777 >10k+ 2.29024606664493E-4 3.5771150881481057 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 54482 3.5222599562578267 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5122 0.33113717367116824 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTT 3869 0.25013075457511713 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTC 2809 0.18160178071892066 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCT 2774 0.17933903158215944 No Hit CGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTG 1782 0.11520625604881332 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12438655254653021 0.0 2 0.0 0.0 0.0 0.3633975113638494 0.0 3 0.0 0.0 0.0 0.6346688078738498 0.0 4 0.0 0.0 0.0 0.9260462467133569 0.0 5 0.0 0.0 0.0 1.69466980348347 0.0 6 0.0 0.0 0.0 3.0440440886971802 0.0 7 0.0 0.0 0.0 4.049803754999868 0.0 8 0.0 0.0 0.0 5.579098921573761 0.0 9 0.0 0.0 0.0 6.49583557183873 0.0 10 0.0 0.0 0.0 7.401387776370563 0.0 11 0.0 0.0 0.0 8.148353591403104 0.0 12 0.0 0.0 0.0 8.645705851663218 0.0 13 0.0 0.0 0.0 8.90650385216878 0.0 14 0.0 0.0 0.0 9.044466899535879 0.0 15 0.0 0.0 0.0 9.178680248333485 0.0 16 0.0 0.0 0.0 9.396679965166593 0.0 17 0.0 0.0 0.0 9.661356964192318 0.0 18 0.0 0.0 0.0 9.99423968719756 0.0 19 0.0 0.0 0.0 10.164463072257337 0.0 20 0.0 0.0 0.0 10.343220254061473 0.0 21 0.0 0.0 0.0 10.551263874692832 0.0 22 0.0 0.0 0.0 10.771978890490054 0.0 23 0.0 0.0 0.0 11.027410943042725 0.0 24 0.0 0.0 0.0 11.218322320210035 0.0 25 0.0 0.0 0.0 11.367599113260939 0.0 26 0.0 0.0 0.0 11.516552656435161 0.0 27 0.0 0.0 0.0 11.674298596255085 0.0 28 0.0 0.0 0.0 11.829329237110896 0.0 29 0.0 0.0 0.0 12.004595320246885 0.0 30 0.0 0.0 0.0 12.241537479853452 0.0 31 0.0 0.0 0.0 12.42921635825396 0.0 32 0.0 0.0 0.0 12.594720295114207 0.0 33 0.0 0.0 0.0 12.76455578032197 0.0 34 0.0 0.0 0.0 12.949390059807692 0.0 35 0.0 0.0 0.0 13.161312678959213 0.0 36 0.0 0.0 0.0 13.339164761108643 0.0 37 0.0 0.0 0.0 13.524322290471046 0.0 38 0.0 0.0 0.0 13.735016560091182 0.0 39 0.0 0.0 0.0 14.015015603271546 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATTG 55 1.8189894E-12 45.000004 1 TAACGCG 20 7.034045E-4 45.0 1 CGTTTTT 14630 0.0 43.585102 1 CGGTCTA 205 0.0 41.707317 31 GCGATAC 55 6.184564E-11 40.909092 9 TGCTACG 55 6.184564E-11 40.909092 1 TAATGCG 55 6.184564E-11 40.909092 1 GCGATCG 95 0.0 40.263157 9 CGGTTTT 1380 0.0 39.945652 1 GTAGGGT 425 0.0 39.70588 4 TCGATAG 80 0.0 39.375 1 TACGGGA 450 0.0 39.000004 4 TAGGGAC 1595 0.0 38.793102 5 GACCGAT 795 0.0 38.773586 9 ATTGGGA 1245 0.0 38.674698 4 ATTCGGC 35 6.249691E-6 38.571426 17 TACGTAG 35 6.249691E-6 38.571426 1 AGGGCGA 1090 0.0 38.394497 6 CACGACG 235 0.0 38.29787 26 CCGCTCG 100 0.0 38.25 19 >>END_MODULE