##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547914_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1732551 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.503229053574756 31.0 31.0 33.0 30.0 34.0 2 31.92317397871693 31.0 31.0 34.0 30.0 34.0 3 32.00846151137831 33.0 31.0 34.0 30.0 34.0 4 35.76660311875379 37.0 35.0 37.0 35.0 37.0 5 35.67906861039011 37.0 35.0 37.0 33.0 37.0 6 35.72168496050044 37.0 35.0 37.0 33.0 37.0 7 36.012660521970204 37.0 35.0 37.0 35.0 37.0 8 36.03613226969942 37.0 35.0 37.0 35.0 37.0 9 37.802842744600305 39.0 38.0 39.0 35.0 39.0 10 37.35605935986877 39.0 37.0 39.0 34.0 39.0 11 37.078943130678404 39.0 37.0 39.0 33.0 39.0 12 36.30501612939533 38.0 35.0 39.0 33.0 39.0 13 35.99396092813429 38.0 35.0 39.0 32.0 39.0 14 37.01202850594297 39.0 35.0 41.0 32.0 41.0 15 37.236911929288084 39.0 35.0 41.0 32.0 41.0 16 37.38438753029492 39.0 35.0 41.0 33.0 41.0 17 37.31295471244425 39.0 35.0 41.0 33.0 41.0 18 37.23701697670083 39.0 35.0 41.0 32.0 41.0 19 37.1531527787638 38.0 35.0 41.0 32.0 41.0 20 37.018588197403716 38.0 35.0 41.0 32.0 41.0 21 36.894801942338205 38.0 35.0 41.0 32.0 41.0 22 36.79172330280609 38.0 35.0 41.0 32.0 41.0 23 36.71308723379572 38.0 35.0 41.0 32.0 41.0 24 36.72123475730296 38.0 35.0 41.0 32.0 41.0 25 36.704385614045414 38.0 35.0 41.0 32.0 41.0 26 36.581105548985285 38.0 35.0 41.0 31.0 41.0 27 36.47735218184054 38.0 35.0 40.0 31.0 41.0 28 36.445316761238196 38.0 35.0 40.0 31.0 41.0 29 36.45066609871802 38.0 35.0 40.0 31.0 41.0 30 36.36002287955737 38.0 35.0 40.0 31.0 41.0 31 36.16836272063564 38.0 35.0 40.0 30.0 41.0 32 36.022359514958 38.0 35.0 40.0 30.0 41.0 33 35.89117376631337 38.0 35.0 40.0 30.0 41.0 34 35.79704724420811 38.0 35.0 40.0 30.0 41.0 35 35.680725704466994 38.0 35.0 40.0 30.0 41.0 36 35.54415136985867 38.0 35.0 40.0 29.0 41.0 37 35.413093755970245 37.0 34.0 40.0 28.0 41.0 38 35.33505853507343 37.0 34.0 40.0 28.0 41.0 39 35.28272818520205 37.0 34.0 40.0 28.0 41.0 40 35.115959645632365 37.0 34.0 40.0 27.0 41.0 41 35.066564851482006 37.0 34.0 40.0 27.0 41.0 42 34.962629094323916 37.0 34.0 40.0 26.0 41.0 43 34.8715524102898 37.0 34.0 40.0 26.0 41.0 44 34.68425806801647 36.0 34.0 40.0 26.0 41.0 45 34.55350751579607 36.0 34.0 40.0 25.0 41.0 46 34.48520303298431 36.0 34.0 40.0 25.0 41.0 47 34.409532533241446 36.0 34.0 40.0 24.0 41.0 48 34.33127740539817 35.0 34.0 40.0 24.0 41.0 49 34.2069330138045 36.0 34.0 40.0 24.0 41.0 50 34.09487455203339 35.0 33.0 40.0 24.0 41.0 51 33.737581750840235 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 5.0 12 2.0 13 4.0 14 9.0 15 51.0 16 108.0 17 279.0 18 666.0 19 1255.0 20 2345.0 21 3845.0 22 5926.0 23 8733.0 24 12852.0 25 18030.0 26 23727.0 27 27146.0 28 30685.0 29 34820.0 30 41435.0 31 50292.0 32 62900.0 33 82787.0 34 154985.0 35 249098.0 36 117039.0 37 149330.0 38 237857.0 39 416274.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.35405422408922 23.971184686626827 29.75687295785232 12.91788813143163 2 30.20032310737173 26.514140132094237 30.170540434307565 13.114996326226471 3 29.194176679358936 25.189850111194417 31.811646525845415 13.804326683601234 4 25.60294040406314 28.255791604402987 30.623225521211207 15.518042470322662 5 23.375069478474227 32.603888716695785 28.917013121114472 15.104028683715514 6 21.448661540122053 41.39514507798039 26.322168871219375 10.834024510678185 7 88.65568748048398 3.928311489820502 5.7047671323961024 1.7112338972994159 8 89.17803862627997 3.1683915798149664 5.149401085451453 2.504168708453604 9 84.53984904340479 5.571610878987112 7.01820610186944 2.870333975738665 10 47.45482239772451 29.978280581639442 11.882074467071964 10.68482255356408 11 40.27887202166055 21.23146735651649 22.380582158909032 16.109078462913935 12 37.72235276191004 20.554835038045056 25.400926148782922 16.321886051261984 13 22.90916688743939 35.754907070556655 25.439655167438076 15.896270874565884 14 16.915981116861783 38.99371504792644 26.435527727610904 17.654776107600874 15 14.637952937604723 26.138105025479767 43.04329280927372 16.180649227641783 16 17.69287022431086 21.441735337083873 41.556987355639166 19.3084070829661 17 17.929919523292533 22.197326370190545 26.835689108141693 33.03706499837523 18 21.805130123153663 24.92284498407262 32.42219132366089 20.84983356911283 19 26.376655001786382 26.80850376121684 25.244624833554685 21.570216403442092 20 29.458238170189503 24.411344889703102 25.2937431567671 20.836673783340288 21 22.582769569265203 28.501152347030477 28.038828294232033 20.877249789472287 22 22.933812626583574 24.176431169991535 26.170946771552465 26.718809431872426 23 20.077561930355873 29.29783885149701 24.925326873494633 25.699272344652478 24 20.71633100555193 25.477633847430752 34.56700553115031 19.239029615867008 25 19.15903197077604 26.507444802490664 31.580080470935634 22.753442755797664 26 19.213344946267092 32.904197336759495 25.704524715289768 22.177933001683645 27 18.958633829538062 32.95660560641505 27.869886658459116 20.214873905587773 28 16.886025288721658 28.65075833265514 35.21027663832118 19.252939740302015 29 17.646637819031014 24.82616673333137 35.26464733217088 22.262548115466732 30 20.20154096473928 29.37668212941495 30.743048833771702 19.67872807207407 31 27.441154690395837 27.331085780447445 24.360321860655183 20.867437668501534 32 28.129907864184084 27.37795308767246 25.595148425645192 18.89699062249827 33 25.84553066547536 27.674740887858423 25.987517827758026 20.49221061890819 34 20.444881564813965 27.493736115127348 27.766282204679687 24.295100115378997 35 19.787354023056174 25.728535552488786 30.489145774063793 23.994964650391243 36 28.483375092565815 24.253889207301835 28.39223780425511 18.870497895877236 37 21.05611898293326 28.36355178000532 30.118420756445264 20.461908480616156 38 21.07678215533049 29.51295517419112 25.8046660675501 23.605596602928284 39 19.8600214365984 28.98985368973265 28.659646959887475 22.49047791378147 40 23.324392759578217 25.122665941724083 27.326410593396673 24.226530705301027 41 18.7510786118273 23.56715617606639 29.229731188288255 28.452034023818058 42 22.980275905298026 25.55168650158062 26.335790403861125 25.13224718926023 43 23.005094799518165 25.464185469864958 27.688997322445342 23.841722408171535 44 20.869457811054335 29.007804099273265 27.98197571096031 22.140762378712083 45 19.681325398213385 32.86050453926032 23.714280272269043 23.743889790257256 46 22.94264353545725 29.58643064475447 26.54986779609951 20.92105802368877 47 21.886108980341703 26.938543223258655 27.551685347213446 23.6236624491862 48 22.614110638012967 24.526723888647435 29.872713703665866 22.986451769673735 49 21.53218000509076 22.916439400629475 31.120353744276503 24.431026850003263 50 19.781005003604513 28.472985788008547 29.198909584768355 22.547099623618582 51 18.55720264511694 29.983128923766166 26.590963267459372 24.86870516365752 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1246.0 1 1792.5 2 2339.0 3 6129.5 4 9920.0 5 7642.5 6 5365.0 7 5455.5 8 5546.0 9 6037.0 10 6528.0 11 6854.0 12 7180.0 13 7024.0 14 6868.0 15 6725.5 16 6583.0 17 6245.5 18 5908.0 19 6080.0 20 6252.0 21 6233.5 22 6215.0 23 6325.5 24 6436.0 25 8418.5 26 11507.0 27 12613.0 28 15180.0 29 17747.0 30 20255.5 31 22764.0 32 29377.0 33 35990.0 34 41601.0 35 47212.0 36 51240.5 37 55269.0 38 63063.0 39 70857.0 40 86976.5 41 103096.0 42 125623.0 43 148150.0 44 154373.5 45 160597.0 46 161096.5 47 161596.0 48 159215.5 49 156835.0 50 147697.5 51 138560.0 52 125061.0 53 111562.0 54 97233.5 55 82905.0 56 79382.5 57 75860.0 58 69863.5 59 63867.0 60 59087.5 61 54308.0 62 48503.5 63 42699.0 64 36455.0 65 30211.0 66 25096.5 67 19982.0 68 16539.5 69 13097.0 70 10961.0 71 8825.0 72 7182.0 73 5539.0 74 4216.5 75 2192.5 76 1491.0 77 990.5 78 490.0 79 406.0 80 322.0 81 288.0 82 254.0 83 167.5 84 81.0 85 62.0 86 43.0 87 34.5 88 26.0 89 21.5 90 17.0 91 9.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1732551.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.3491060071133 #Duplication Level Percentage of deduplicated Percentage of total 1 78.91118868830205 15.26860955077276 2 7.991782925856755 3.0926771003648086 3 2.763368109413363 1.6040610745714625 4 1.332311026728974 1.031161091624995 5 0.7759035778345509 0.7506520289409604 6 0.5260084409467516 0.6106675850709055 7 0.36936063176789313 0.5002758613251913 8 0.29444968501837354 0.4557870535345304 9 0.23230140915902123 0.40453421322777305 >10 3.3434508715174482 17.022305636995338 >50 2.6650185661460752 38.03807002497516 >100 0.7864033632129867 19.34157434322641 >500 0.005735763493633966 0.7096416068027829 >1k 0.002415058313109038 0.8237777249765121 >5k 3.0188228913862977E-4 0.3462051035904267 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5927 0.3420967117273893 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4733 0.2731809914975086 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10822192247154629 0.0 2 0.0 0.0 0.0 0.39785264618472993 0.0 3 0.0 0.0 0.0 0.5492479009275918 0.0 4 0.0 0.0 0.0 0.8744908519287455 0.0 5 0.0 0.0 0.0 1.4209682716410657 0.0 6 0.0 0.0 0.0 2.0165062962071536 0.0 7 0.0 0.0 0.0 2.3141598717728944 0.0 8 0.0 0.0 0.0 3.057341457769497 0.0 9 0.0 0.0 0.0 3.31055189717359 0.0 10 5.771835865149136E-5 0.0 0.0 3.8151835068635784 0.0 11 5.771835865149136E-5 0.0 0.0 4.490892331596588 0.0 12 5.771835865149136E-5 0.0 0.0 4.993157488581866 0.0 13 5.771835865149136E-5 0.0 0.0 5.180568999123258 0.0 14 5.771835865149136E-5 0.0 0.0 5.250639086526169 0.0 15 5.771835865149136E-5 0.0 0.0 5.373232880301936 0.0 16 5.771835865149136E-5 0.0 0.0 5.652878327968412 0.0 17 5.771835865149136E-5 0.0 0.0 5.970733329062175 0.0 18 5.771835865149136E-5 0.0 0.0 6.398772676821634 0.0 19 5.771835865149136E-5 0.0 0.0 6.600671495384551 0.0 20 5.771835865149136E-5 0.0 0.0 6.814171704036418 0.0 21 1.1543671730298271E-4 0.0 0.0 7.093066813040425 0.0 22 1.1543671730298271E-4 0.0 0.0 7.372654542348248 0.0 23 1.1543671730298271E-4 0.0 0.0 7.676368545572396 0.0 24 1.1543671730298271E-4 0.0 0.0 7.8914271499078525 0.0 25 1.1543671730298271E-4 0.0 0.0 8.065967466469962 0.0 26 1.1543671730298271E-4 0.0 0.0 8.24778029622216 0.0 27 1.1543671730298271E-4 0.0 0.0 8.423763571750557 0.0 28 1.1543671730298271E-4 0.0 0.0 8.612848914692844 0.0 29 1.1543671730298271E-4 0.0 0.0 8.812612153985654 0.0 30 1.1543671730298271E-4 0.0 0.0 9.077712575271955 0.0 31 1.1543671730298271E-4 0.0 0.0 9.300274566232105 0.0 32 1.1543671730298271E-4 0.0 0.0 9.50130760941525 0.0 33 1.1543671730298271E-4 0.0 0.0 9.713191704024874 0.0 34 1.1543671730298271E-4 0.0 0.0 9.930328169271785 0.0 35 1.1543671730298271E-4 0.0 0.0 10.207376290798944 0.0 36 1.1543671730298271E-4 0.0 0.0 10.422204021699795 0.0 37 1.1543671730298271E-4 0.0 0.0 10.644073392356127 0.0 38 1.1543671730298271E-4 0.0 0.0 10.862768253286628 0.0 39 1.1543671730298271E-4 0.0 0.0 11.12913847846326 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTACG 70 0.0 45.000004 1 CGTTCAA 25 3.891628E-5 45.0 9 TCGACGA 25 3.891628E-5 45.0 34 ATACTCG 135 0.0 43.333336 44 GCGATAC 80 0.0 42.1875 9 TAATGCG 70 0.0 41.785717 1 CGGGACC 555 0.0 41.756756 6 CGTTTTT 3580 0.0 41.166203 1 TACGGGA 575 0.0 40.695652 4 CGACGGT 305 0.0 40.57377 28 CGTAAGG 200 0.0 40.5 2 TAACGCC 190 0.0 40.26316 12 GATACGT 45 1.9292202E-8 40.0 11 ATACGTA 45 1.9292202E-8 40.0 12 TCACGAC 315 0.0 39.999996 25 TAAGGGA 1865 0.0 39.571045 4 CGCATCG 165 0.0 39.545452 21 CGGTCTA 300 0.0 39.000004 31 AAATGCG 75 0.0 39.000004 1 ACGTAGG 295 0.0 38.898304 2 >>END_MODULE