SRR1547913_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547913_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1984062
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8581	0.43249656512750106	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4970	0.2504962042516816	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGGAT	20	7.034525E-4	45.000004	21
GAGTCGA	20	7.034525E-4	45.000004	11
ACCTCGT	20	7.034525E-4	45.000004	11
TCTAACG	20	7.034525E-4	45.000004	1
CTCGCTA	40	6.8193913E-9	45.000004	31
CGTAATC	20	7.034525E-4	45.000004	19
CGGTCGA	20	7.034525E-4	45.000004	43
CACGTAT	20	7.034525E-4	45.000004	29
AGTCGAC	20	7.034525E-4	45.000004	12
GTATCCG	25	3.891834E-5	45.0	44
TGTCGAC	25	3.891834E-5	45.0	26
TCGGTAT	50	2.1827873E-11	45.0	42
CCCGATA	25	3.891834E-5	45.0	23
GCCGAAT	30	2.1663036E-6	44.999996	39
CGTAGAA	30	2.1663036E-6	44.999996	39
CGAATCC	30	2.1663036E-6	44.999996	41
CGACGGT	345	0.0	43.695652	28
CGGTCTA	350	0.0	42.42857	31
GCTCGAT	75	0.0	42.0	44
TAATACG	65	0.0	41.538464	1