##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547913_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1984062 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.483705146310953 31.0 31.0 33.0 30.0 34.0 2 31.899845367735484 31.0 31.0 34.0 30.0 34.0 3 31.9832878206427 33.0 31.0 34.0 30.0 34.0 4 35.73728240347328 37.0 35.0 37.0 35.0 37.0 5 35.64253788440079 37.0 35.0 37.0 33.0 37.0 6 35.67695565965177 37.0 35.0 37.0 33.0 37.0 7 36.00752194235866 37.0 35.0 37.0 35.0 37.0 8 36.03228528140754 37.0 35.0 37.0 35.0 37.0 9 37.82623627689054 39.0 38.0 39.0 35.0 39.0 10 37.309646573544576 39.0 37.0 39.0 34.0 39.0 11 37.029157858978195 39.0 37.0 39.0 33.0 39.0 12 36.2572076880662 38.0 35.0 39.0 32.0 39.0 13 35.9613676387129 38.0 35.0 39.0 32.0 39.0 14 36.92452504004411 39.0 35.0 41.0 32.0 41.0 15 37.19497273774711 39.0 35.0 41.0 32.0 41.0 16 37.33159800449784 39.0 35.0 41.0 33.0 41.0 17 37.26801884215312 39.0 35.0 41.0 33.0 41.0 18 37.210490397981516 39.0 35.0 41.0 32.0 41.0 19 37.12029210780712 38.0 35.0 41.0 32.0 41.0 20 36.9587301203289 38.0 35.0 41.0 32.0 41.0 21 36.83641993042556 38.0 35.0 41.0 32.0 41.0 22 36.73712817442197 38.0 35.0 41.0 32.0 41.0 23 36.68159109947169 38.0 35.0 41.0 32.0 41.0 24 36.690149803786376 38.0 35.0 41.0 32.0 41.0 25 36.626729910658035 38.0 35.0 41.0 32.0 41.0 26 36.49824753460325 38.0 35.0 40.0 31.0 41.0 27 36.42257500017641 38.0 35.0 40.0 31.0 41.0 28 36.39488836538374 38.0 35.0 40.0 31.0 41.0 29 36.41025734074842 38.0 35.0 40.0 31.0 41.0 30 36.324371415812614 38.0 35.0 40.0 31.0 41.0 31 36.1359881898852 38.0 35.0 40.0 30.0 41.0 32 35.96704135253838 38.0 35.0 40.0 30.0 41.0 33 35.857757469272634 38.0 35.0 40.0 30.0 41.0 34 35.765429205337334 38.0 35.0 40.0 30.0 41.0 35 35.6753019814905 38.0 35.0 40.0 30.0 41.0 36 35.52703897358046 38.0 35.0 40.0 29.0 41.0 37 35.40649536153608 37.0 34.0 40.0 28.0 41.0 38 35.30808462638768 37.0 34.0 40.0 28.0 41.0 39 35.22823732322881 37.0 34.0 40.0 27.0 41.0 40 35.05466915852428 37.0 34.0 40.0 26.0 41.0 41 35.01216897455826 37.0 34.0 40.0 26.0 41.0 42 34.92238044980449 37.0 34.0 40.0 26.0 41.0 43 34.84270098414263 37.0 34.0 40.0 26.0 41.0 44 34.67847224532298 36.0 34.0 40.0 25.0 41.0 45 34.514294412170585 36.0 34.0 40.0 24.0 41.0 46 34.47273371497463 36.0 34.0 40.0 24.0 41.0 47 34.38579489955455 36.0 34.0 40.0 24.0 41.0 48 34.30664465122562 36.0 34.0 40.0 24.0 41.0 49 34.19726046867487 36.0 34.0 40.0 24.0 41.0 50 34.09532766617172 35.0 34.0 40.0 24.0 41.0 51 33.766299137829364 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 1.0 13 6.0 14 21.0 15 53.0 16 158.0 17 427.0 18 944.0 19 1545.0 20 2775.0 21 4559.0 22 7155.0 23 10558.0 24 15346.0 25 21567.0 26 27500.0 27 31832.0 28 35858.0 29 41532.0 30 48433.0 31 58565.0 32 72252.0 33 95865.0 34 174940.0 35 286363.0 36 129317.0 37 165552.0 38 262868.0 39 487977.0 40 89.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.115799808675334 24.58476600025604 29.6519463605472 12.647487830521426 2 29.21264557256779 26.59937038257877 31.054120284547558 13.133863760305879 3 29.366673017274664 25.756805986909683 31.357588623742604 13.518932372073051 4 25.579946594410863 28.592402858378417 30.8002471696953 15.02740337751542 5 23.68439091117112 32.27132015027756 29.85199051239326 14.192298426158054 6 20.969102780054254 41.81729199994758 26.50995785413964 10.703647365858526 7 88.91400571151506 3.855423872842683 5.747249833926561 1.4833205817156925 8 89.78494623655914 2.909586494776877 4.9491900958740205 2.356277172789963 9 86.09569660625525 4.752774862882309 6.727763547711714 2.423764983150728 10 46.57908875831501 28.199673195696505 12.7052481222865 12.515989923701982 11 39.61998163363846 24.189717861639405 21.574124195715658 14.616176309006473 12 37.2595715254866 21.546655296054258 24.884605420596735 16.309167757862404 13 21.83540635322888 36.46897123174578 25.56855582134026 16.127066593685075 14 15.277193958656534 39.51983355358855 28.090906433367508 17.112066054387412 15 14.108430079301955 25.871620947329266 44.28541043576259 15.734538537606182 16 17.46991777474696 21.898005203466425 41.692850324233824 18.9392266975528 17 17.561951189025343 22.63376850118595 27.504080013628606 32.3002002961601 18 21.135428227545308 25.62697133456515 32.80204953272629 20.435550905163247 19 25.987242334160925 27.910972540172637 25.32839195549333 20.77339317017311 20 27.74368946131724 26.284057655456333 25.89455369842273 20.077699184803702 21 21.757838212717143 28.97933633122352 29.127113971236785 20.13571148482255 22 22.68336372552874 24.107915982464256 27.437398629679922 25.771321662327086 23 19.45428116661677 29.685261851696165 26.615246902566554 24.24521007912051 24 19.935213718119694 26.232849578289386 35.48931434602346 18.342622357567457 25 18.99310606220975 27.189321704664472 32.3064501008537 21.511122132272074 26 17.7422378937755 33.86915328250831 26.590046077189122 21.798562746527075 27 17.712803329734655 33.06408771500084 29.144804950651743 20.07830400461276 28 15.733631307892596 29.448323691497546 36.312474106151925 18.505570894457936 29 16.47236830300666 26.214452975763862 35.24587437287746 22.067304348352017 30 19.256706695657698 29.665504404600256 32.14521522008889 18.932573679653157 31 27.175058037500843 27.447831771386177 25.931346903473784 19.4457632876392 32 26.950266675134145 27.839906212608273 26.355980811083523 18.853846301174055 33 25.360245798770404 27.896910479612032 26.329318337834202 20.41352538378337 34 19.529934044399823 27.685475554695365 28.70883067162216 24.07575972928265 35 19.48941111719291 26.43606903413301 30.126477902404257 23.948041946269825 36 27.60926825875401 24.558708346815774 27.67191751064231 20.160105883787907 37 19.704525362614678 29.554671174590307 30.786033904182432 19.954769558612583 38 20.304405809899087 30.708314558718424 25.97474272477372 23.012536906608766 39 19.500449078708225 29.03860867251124 28.75766987120362 22.703272377576912 40 22.94782118703952 25.503537691866484 27.18110623559143 24.36753488550257 41 17.926808738839814 23.810495841359796 29.515257083700003 28.747438336100384 42 21.67059295526047 25.29124593888699 26.810452495940147 26.22770860991239 43 21.548671362084452 25.988048760573008 28.077802004171243 24.3854778731713 44 20.23485153185737 29.214964048502516 27.868282341983264 22.681902077656847 45 18.50955262486757 33.17648339618419 24.654421081599263 23.659542897348974 46 22.94545230945404 29.160127052481222 27.018359305303967 20.87606133276077 47 20.752426083459085 26.811510930605998 28.814472531604356 23.62159045433056 48 21.544689631674814 24.734710911251764 30.7826065919311 22.93799286514232 49 20.639727992371206 23.848599489330475 31.393525000730826 24.118147517567497 50 19.582502966137145 28.81936149172758 29.340212150628357 22.257923391506917 51 18.50592370601322 30.381863066779164 26.179575033441495 24.93263819376612 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1674.0 1 2338.0 2 3002.0 3 8290.5 4 13579.0 5 10176.5 6 6774.0 7 6800.5 8 6827.0 9 7487.5 10 8148.0 11 8381.5 12 8615.0 13 8717.0 14 8819.0 15 8402.0 16 7985.0 17 7980.0 18 7975.0 19 8250.0 20 8525.0 21 8554.5 22 8584.0 23 8824.5 24 9065.0 25 10761.5 26 14522.5 27 16587.0 28 20922.5 29 25258.0 30 28101.5 31 30945.0 32 36980.0 33 43015.0 34 50968.5 35 58922.0 36 61609.5 37 64297.0 38 71074.5 39 77852.0 40 103450.0 41 129048.0 42 153347.0 43 177646.0 44 181602.5 45 185559.0 46 186885.0 47 188211.0 48 187083.5 49 185956.0 50 170931.5 51 155907.0 52 140527.0 53 125147.0 54 112139.0 55 99131.0 56 91613.5 57 84096.0 58 75189.0 59 66282.0 60 59765.5 61 53249.0 62 44353.0 63 35457.0 64 31042.0 65 26627.0 66 22045.0 67 17463.0 68 13734.0 69 10005.0 70 8338.0 71 6671.0 72 5581.5 73 4492.0 74 3286.5 75 1561.0 76 1041.0 77 767.0 78 493.0 79 361.5 80 230.0 81 202.5 82 175.0 83 136.5 84 98.0 85 73.0 86 48.0 87 36.0 88 24.0 89 17.0 90 10.0 91 7.0 92 4.0 93 4.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1984062.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.198091546593915 #Duplication Level Percentage of deduplicated Percentage of total 1 77.9397674944533 14.962947914787591 2 8.997818871535182 3.4548190083080557 3 3.2699732797362833 1.8833173913787933 4 1.5787408270223409 1.2123524370208114 5 0.9314872260600198 0.8941388520191541 6 0.5966690830932514 0.6872944608147895 7 0.41841245297113755 0.5622904403462374 8 0.3126248512914601 0.4801440411867008 9 0.25103138712809553 0.4337391196038271 >10 2.522931257172202 11.774902802232763 >50 1.8040767213674571 26.040710049053633 >100 1.3647587329550719 35.19933829617963 >500 0.009046948120075341 1.1848834076951424 >1k 0.0023947803847258254 0.7907736646312052 >5k 2.6608670941398064E-4 0.43834811474162616 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8581 0.43249656512750106 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4970 0.2504962042516816 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08895891358233765 0.0 2 0.0 0.0 0.0 0.30457717551165236 0.0 3 5.040165075486552E-5 0.0 0.0 0.443383321690552 0.0 4 5.040165075486552E-5 0.0 0.0 0.7659034848709365 0.0 5 5.040165075486552E-5 0.0 0.0 1.2418462729491315 0.0 6 5.040165075486552E-5 0.0 0.0 1.8742861866211842 0.0 7 5.040165075486552E-5 0.0 0.0 2.1473119287602906 0.0 8 5.040165075486552E-5 0.0 0.0 2.8534390558359566 0.0 9 5.040165075486552E-5 0.0 0.0 3.105497711261039 0.0 10 5.040165075486552E-5 0.0 0.0 3.5944945268847444 0.0 11 5.040165075486552E-5 0.0 0.0 4.2458854612406265 0.0 12 5.040165075486552E-5 0.0 0.0 4.753430084342122 0.0 13 5.040165075486552E-5 0.0 0.0 4.966881075288978 0.0 14 5.040165075486552E-5 0.0 0.0 5.056545611981884 0.0 15 5.040165075486552E-5 0.0 0.0 5.189404363371709 0.0 16 5.040165075486552E-5 0.0 0.0 5.492116677805432 0.0 17 5.040165075486552E-5 0.0 0.0 5.835906337604369 0.0 18 5.040165075486552E-5 0.0 0.0 6.299349516295358 0.0 19 5.040165075486552E-5 0.0 0.0 6.520259951553934 0.0 20 5.040165075486552E-5 0.0 0.0 6.746714568395544 0.0 21 5.040165075486552E-5 0.0 0.0 7.060968860852131 0.0 22 5.040165075486552E-5 0.0 0.0 7.369275758519643 0.0 23 5.040165075486552E-5 0.0 0.0 7.732671660462223 0.0 24 5.040165075486552E-5 0.0 0.0 7.979841355764084 0.0 25 5.040165075486552E-5 0.0 0.0 8.177214220120137 0.0 26 5.040165075486552E-5 0.0 0.0 8.373075034953544 0.0 27 5.040165075486552E-5 0.0 0.0 8.579873008000758 0.0 28 5.040165075486552E-5 0.0 0.0 8.786318169492688 0.0 29 5.040165075486552E-5 0.0 0.0 9.031421397113599 0.0 30 5.040165075486552E-5 0.0 0.0 9.325968644125032 0.0 31 5.040165075486552E-5 0.0 0.0 9.59093012214336 0.0 32 5.040165075486552E-5 0.0 0.0 9.824037756884614 0.0 33 5.040165075486552E-5 0.0 0.0 10.05553253880171 0.0 34 5.040165075486552E-5 0.0 0.0 10.320090803614 0.0 35 5.040165075486552E-5 0.0 0.0 10.652993706849887 0.0 36 5.040165075486552E-5 0.0 0.0 10.919114422835577 0.0 37 5.040165075486552E-5 0.0 0.0 11.183269474441827 0.0 38 5.040165075486552E-5 0.0 0.0 11.451456658108466 0.0 39 5.040165075486552E-5 0.0 0.0 11.835265228606767 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGGAT 20 7.034525E-4 45.000004 21 GAGTCGA 20 7.034525E-4 45.000004 11 ACCTCGT 20 7.034525E-4 45.000004 11 TCTAACG 20 7.034525E-4 45.000004 1 CTCGCTA 40 6.8193913E-9 45.000004 31 CGTAATC 20 7.034525E-4 45.000004 19 CGGTCGA 20 7.034525E-4 45.000004 43 CACGTAT 20 7.034525E-4 45.000004 29 AGTCGAC 20 7.034525E-4 45.000004 12 GTATCCG 25 3.891834E-5 45.0 44 TGTCGAC 25 3.891834E-5 45.0 26 TCGGTAT 50 2.1827873E-11 45.0 42 CCCGATA 25 3.891834E-5 45.0 23 GCCGAAT 30 2.1663036E-6 44.999996 39 CGTAGAA 30 2.1663036E-6 44.999996 39 CGAATCC 30 2.1663036E-6 44.999996 41 CGACGGT 345 0.0 43.695652 28 CGGTCTA 350 0.0 42.42857 31 GCTCGAT 75 0.0 42.0 44 TAATACG 65 0.0 41.538464 1 >>END_MODULE