##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547911_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4349607 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.48124278814155 31.0 31.0 33.0 30.0 34.0 2 31.894062613013084 31.0 31.0 34.0 30.0 34.0 3 31.89546572828304 33.0 31.0 34.0 30.0 34.0 4 35.72867525732784 37.0 35.0 37.0 35.0 37.0 5 35.6942601940819 37.0 35.0 37.0 33.0 37.0 6 35.747811698850036 37.0 35.0 37.0 33.0 37.0 7 36.02934793879079 37.0 35.0 37.0 35.0 37.0 8 36.04976104737738 37.0 35.0 37.0 35.0 37.0 9 37.8099600722548 39.0 38.0 39.0 35.0 39.0 10 37.230616007377215 39.0 37.0 39.0 34.0 39.0 11 37.08586040072126 39.0 37.0 39.0 33.0 39.0 12 36.71266507525852 39.0 35.0 39.0 33.0 39.0 13 36.60701001262873 39.0 35.0 39.0 33.0 39.0 14 37.6914475261788 40.0 36.0 41.0 33.0 41.0 15 37.82266926644177 40.0 36.0 41.0 33.0 41.0 16 37.881690920582024 40.0 36.0 41.0 33.0 41.0 17 37.807241895647124 40.0 36.0 41.0 33.0 41.0 18 37.67352682667652 39.0 36.0 41.0 33.0 41.0 19 37.580383009315554 39.0 36.0 41.0 33.0 41.0 20 37.43050257184155 39.0 35.0 41.0 32.0 41.0 21 37.34152671724135 39.0 35.0 41.0 32.0 41.0 22 37.24093739963174 39.0 35.0 41.0 32.0 41.0 23 37.130210384524396 39.0 35.0 41.0 32.0 41.0 24 37.15769838516445 39.0 35.0 41.0 32.0 41.0 25 37.13243771218871 39.0 35.0 41.0 32.0 41.0 26 37.04857703236178 39.0 35.0 41.0 32.0 41.0 27 36.982035388484526 39.0 35.0 41.0 32.0 41.0 28 36.89325518374419 39.0 35.0 41.0 31.0 41.0 29 36.8782853255478 39.0 35.0 41.0 31.0 41.0 30 36.77476194975776 39.0 35.0 41.0 31.0 41.0 31 36.60970910705266 39.0 35.0 41.0 31.0 41.0 32 36.45937713453193 39.0 35.0 41.0 30.0 41.0 33 36.322611215220135 39.0 35.0 41.0 30.0 41.0 34 36.13133370440134 39.0 35.0 41.0 30.0 41.0 35 35.993531139709866 39.0 35.0 41.0 29.0 41.0 36 35.88302989212588 38.0 35.0 41.0 29.0 41.0 37 35.79048911775248 38.0 35.0 41.0 28.0 41.0 38 35.6749244242066 38.0 35.0 41.0 27.0 41.0 39 35.580800748205526 38.0 35.0 40.0 27.0 41.0 40 35.43844673783172 38.0 35.0 40.0 26.0 41.0 41 35.362596436873496 38.0 35.0 40.0 26.0 41.0 42 35.302993810705196 38.0 34.0 40.0 26.0 41.0 43 35.25258465879791 38.0 34.0 40.0 26.0 41.0 44 35.07292245023516 38.0 34.0 40.0 25.0 41.0 45 34.94852822335443 38.0 34.0 40.0 24.0 41.0 46 34.90706884553018 38.0 34.0 40.0 24.0 41.0 47 34.839221566454164 38.0 34.0 40.0 24.0 41.0 48 34.72996893742354 37.0 34.0 40.0 24.0 41.0 49 34.586985444891916 37.0 34.0 40.0 24.0 41.0 50 34.52750282956598 37.0 34.0 40.0 24.0 41.0 51 34.2149116000595 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 3.0 11 9.0 12 13.0 13 27.0 14 41.0 15 125.0 16 270.0 17 726.0 18 1630.0 19 3102.0 20 5396.0 21 8938.0 22 13623.0 23 20517.0 24 31228.0 25 47737.0 26 64624.0 27 73808.0 28 76629.0 29 82764.0 30 95517.0 31 113973.0 32 141139.0 33 184220.0 34 303332.0 35 419174.0 36 316433.0 37 424842.0 38 689250.0 39 1230351.0 40 163.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.05009096224096 24.72301520574158 28.5605573101202 14.666336521897266 2 33.16136377378462 25.44390792087653 28.297958873066005 13.096769432272847 3 29.43321086249861 24.999545935989158 31.87901803542251 13.688225166089719 4 25.542698455285727 27.303961024524742 31.917458289909874 15.235882230279655 5 23.350684326193146 31.559265009459477 30.436611859416264 14.653438804931113 6 21.612918132603703 40.05159546598118 27.601666081556335 10.733820319858783 7 87.53381627351621 3.2213714940223332 7.590823722694946 1.6539885097665143 8 88.04402328762116 2.4988464475066365 7.511483221357699 1.945647043514506 9 83.11206046891132 4.65504124855418 9.404918651271252 2.827979631263238 10 37.33790202195279 26.84477011371372 24.075508430991583 11.74181943334191 11 32.709253962484425 23.587855178640275 26.181951610800702 17.520939248074598 12 29.790116670310674 22.420577307329147 29.167738602590994 18.62156741976919 13 24.800539451035462 26.474759673690063 29.645069083252807 19.07963179202167 14 20.080848683570725 29.568395489523535 30.734822709270055 19.615933117635688 15 19.609380801529884 26.12587757928475 36.6484834147085 17.616258204476864 16 23.051599834191915 23.97237267642801 34.702215625457654 18.27381186392242 17 23.07769414570098 24.014353480670785 29.119872209144415 23.788080164483826 18 23.810541963906164 25.230003538250696 31.4490711459679 19.510383351875237 19 25.60953207956489 26.605805995806058 28.118425411767085 19.666236512861968 20 26.98052950530933 26.241773107317513 27.65357881758053 19.12411856979263 21 24.957886999905966 26.294858363065902 30.086902104029168 18.660352532998957 22 24.054380085373232 23.073739765454672 30.411115303060715 22.460764846111385 23 21.935062179180786 26.519499347872117 29.643252827209448 21.90218564573765 24 21.827903072622423 26.002877961158326 32.2995387859179 19.869680180301348 25 21.874137134688258 26.50802704704126 30.520021693913957 21.097814124356525 26 20.852780492582433 28.7350328431971 28.259564599744298 22.152622064476173 27 20.28939626039778 27.946961645040574 31.00470916108053 20.758932933481116 28 18.969690824941196 27.524072864513965 32.86377366966717 20.64246264087767 29 20.02900491929501 26.080540149949176 32.46739303114051 21.4230618996153 30 21.729204500544533 26.00122263919476 31.673321290866046 20.59625156939466 31 24.50363906440283 25.69786189878764 28.521312385233884 21.277186651575647 32 24.65477915590995 26.39144180152368 28.558143298923326 20.395635743643044 33 23.851097352013642 25.98735931774986 28.31561564067742 21.84592768955908 34 20.848458263010887 26.73489811838173 30.59021194328591 21.826431675321473 35 21.490056457974248 26.908109169403122 29.321499620540433 22.2803347520822 36 24.376777028361413 26.48402487856949 28.233516269400894 20.905681823668207 37 21.40119785534647 28.626011499429723 28.796394708763344 21.176395936460466 38 21.690925180136965 28.738642364700993 27.09470073963004 22.475731715532003 39 21.420670879001253 27.445284137164577 27.904061217484706 23.229983766349466 40 22.817601682174963 26.293685843341706 28.56963859033701 22.319073884146317 41 20.036982651536103 25.41314652105351 29.74928539520927 24.800585432201117 42 21.83606472952614 26.720483022948972 28.13465676324321 23.30879548428168 43 21.74311380315509 26.09867971979997 28.786600720478884 23.37160575656605 44 21.684119967620063 27.39153215451419 28.678981802263976 22.245366075601773 45 21.001667506972467 28.474549539763018 27.312168662594118 23.211614290670397 46 22.162691939754556 27.833411156456204 27.856125852289644 22.147771051499596 47 21.52182944344167 26.931214705144622 29.16670402636376 22.38025182504994 48 21.98725080219891 26.27628197214139 29.759493213984623 21.976974011675075 49 21.677038868109232 25.421836961362253 29.417117454519452 23.484006716009056 50 20.39168136339674 26.990185550096825 30.006412073550553 22.611721012955883 51 20.07388253697403 27.707790611887468 28.549682764442856 23.668644086695647 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2373.0 1 3813.0 2 5253.0 3 30822.0 4 56391.0 5 41630.0 6 26869.0 7 24626.5 8 22384.0 9 22771.5 10 23159.0 11 22889.5 12 22620.0 13 22273.0 14 21926.0 15 20824.5 16 19723.0 17 18920.0 18 18117.0 19 17572.5 20 17028.0 21 17671.5 22 18315.0 23 19925.5 24 21536.0 25 25583.0 26 33019.0 27 36408.0 28 44080.5 29 51753.0 30 61838.0 31 71923.0 32 82893.5 33 93864.0 34 108316.5 35 122769.0 36 135019.5 37 147270.0 38 162886.0 39 178502.0 40 206498.5 41 234495.0 42 261217.0 43 287939.0 44 308087.0 45 328235.0 46 345922.0 47 363609.0 48 363282.5 49 362956.0 50 347932.0 51 332908.0 52 312782.0 53 292656.0 54 266278.0 55 239900.0 56 225449.5 57 210999.0 58 196862.0 59 182725.0 60 167073.5 61 151422.0 62 137535.5 63 123649.0 64 104053.5 65 84458.0 66 69353.0 67 54248.0 68 45506.5 69 36765.0 70 29658.0 71 22551.0 72 18178.5 73 13806.0 74 11480.0 75 6880.5 76 4607.0 77 3728.5 78 2850.0 79 1896.5 80 943.0 81 699.0 82 455.0 83 321.5 84 188.0 85 165.0 86 142.0 87 94.5 88 47.0 89 42.0 90 37.0 91 27.0 92 17.0 93 22.5 94 28.0 95 15.0 96 2.0 97 1.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4349607.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.058288759503185 #Duplication Level Percentage of deduplicated Percentage of total 1 77.1772858796409 14.708669999689238 2 7.839376547958879 2.9881020389095516 3 2.713757156414508 1.5515870253034785 4 1.4412087043059896 1.0986788659749198 5 0.9260380357029819 0.8824350143355274 6 0.6568003647278655 0.7510494604998402 7 0.5059634222817135 0.674995790251394 8 0.38223607870383386 0.5827812449790281 9 0.3168248027757365 0.5434324719725369 >10 4.7149355942686615 23.091442821836544 >50 2.7795982630361418 38.15521358639416 >100 0.5389481428096388 12.809088432449695 >500 0.004561390750935178 0.5950398601034345 >1k 0.0023423357910189297 0.7878885994115323 >5k 0.0 0.0 >10k+ 1.2328083110625944E-4 0.7795947878891292 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 33181 0.7628505287949003 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.897174848210425E-5 0.0 0.0 0.04402696611440988 0.0 2 6.897174848210425E-5 0.0 0.0 0.1363341561662927 0.0 3 6.897174848210425E-5 0.0 0.0 0.2357454363118323 0.0 4 6.897174848210425E-5 0.0 0.0 0.37985040947377546 0.0 5 6.897174848210425E-5 0.0 0.0 0.7052821093951707 0.0 6 6.897174848210425E-5 0.0 0.0 1.2340655144246366 0.0 7 6.897174848210425E-5 0.0 0.0 1.5273563795533711 0.0 8 6.897174848210425E-5 0.0 0.0 2.1322845949070803 0.0 9 6.897174848210425E-5 0.0 0.0 2.4511639787226756 0.0 10 6.897174848210425E-5 0.0 0.0 2.9426106772404954 0.0 11 6.897174848210425E-5 0.0 0.0 3.3704654236578153 0.0 12 6.897174848210425E-5 0.0 0.0 3.6853904272271034 0.0 13 6.897174848210425E-5 0.0 0.0 3.833886601709074 0.0 14 6.897174848210425E-5 0.0 0.0 3.913709905285696 0.0 15 6.897174848210425E-5 0.0 0.0 4.004913547361865 0.0 16 6.897174848210425E-5 0.0 0.0 4.194792770933098 0.0 17 6.897174848210425E-5 0.0 0.0 4.398627278280544 0.0 18 6.897174848210425E-5 0.0 0.0 4.66945634398694 0.0 19 6.897174848210425E-5 0.0 0.0 4.811285249448973 0.0 20 6.897174848210425E-5 0.0 0.0 4.9725182068173055 0.0 21 6.897174848210425E-5 0.0 0.0 5.170145256801361 0.0 22 6.897174848210425E-5 0.0 0.0 5.38959036988859 0.0 23 6.897174848210425E-5 0.0 0.0 5.613679580706947 0.0 24 6.897174848210425E-5 0.0 0.0 5.7893966052565204 0.0 25 6.897174848210425E-5 0.0 0.0 5.949640967563276 0.0 26 6.897174848210425E-5 0.0 0.0 6.105379175635868 0.0 27 6.897174848210425E-5 0.0 0.0 6.277118829356307 0.0 28 6.897174848210425E-5 0.0 0.0 6.447065217616212 0.0 29 6.897174848210425E-5 0.0 0.0 6.6420943317407755 0.0 30 6.897174848210425E-5 0.0 0.0 6.8753108039415975 0.0 31 6.897174848210425E-5 0.0 0.0 7.07052384272878 0.0 32 6.897174848210425E-5 0.0 0.0 7.2621733411777205 0.0 33 6.897174848210425E-5 0.0 0.0 7.454765453522582 0.0 34 6.897174848210425E-5 0.0 0.0 7.657933233968034 0.0 35 6.897174848210425E-5 0.0 0.0 7.888206911566953 0.0 36 6.897174848210425E-5 0.0 0.0 8.086891528361068 0.0 37 9.196233130947233E-5 0.0 0.0 8.306152716785677 0.0 38 9.196233130947233E-5 0.0 0.0 8.553324472762712 0.0 39 9.196233130947233E-5 0.0 0.0 8.93253114591732 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 18985 0.0 42.428234 1 TCACGAC 525 0.0 41.999996 25 CGTTAGG 695 0.0 39.496403 2 TACGGGA 1315 0.0 38.6692 4 CACGACC 695 0.0 38.52518 27 CGAGGGA 2455 0.0 38.12627 4 AGGGCGA 3445 0.0 37.946297 6 TAGGGCG 1200 0.0 37.500004 5 GGGCGAT 6655 0.0 37.392937 7 CACGACG 560 0.0 37.36607 26 CGAGGGT 1355 0.0 37.361626 4 CGGTAGT 750 0.0 36.9 12 ACGGTCT 580 0.0 36.853447 30 ATAGGGT 2905 0.0 36.790016 4 TACGGGT 1040 0.0 36.778843 4 CGCATCG 185 0.0 36.486485 21 TAGGGTC 2250 0.0 36.4 5 GCGCGAC 730 0.0 36.369865 9 TAGGGTA 3415 0.0 36.36896 5 CTCACGA 625 0.0 36.359997 24 >>END_MODULE