##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547910_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2152964 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.47143519352855 31.0 31.0 33.0 30.0 34.0 2 31.875723885768643 31.0 31.0 34.0 30.0 34.0 3 31.9160315732172 33.0 31.0 34.0 30.0 34.0 4 35.70067126064347 37.0 35.0 37.0 33.0 37.0 5 35.628681668620565 37.0 35.0 37.0 33.0 37.0 6 35.673148273728685 37.0 35.0 37.0 33.0 37.0 7 36.00211801033366 37.0 35.0 37.0 35.0 37.0 8 36.02574590192869 37.0 35.0 37.0 35.0 37.0 9 37.79195379021665 39.0 38.0 39.0 35.0 39.0 10 37.30811894671718 39.0 37.0 39.0 34.0 39.0 11 36.99073138241048 39.0 37.0 39.0 33.0 39.0 12 36.26438528465873 38.0 35.0 39.0 32.0 39.0 13 35.99709516740642 38.0 35.0 39.0 32.0 39.0 14 36.992741169847704 39.0 35.0 41.0 32.0 41.0 15 37.234931935694235 39.0 35.0 41.0 32.0 41.0 16 37.37227190050554 39.0 35.0 41.0 33.0 41.0 17 37.29309407867479 39.0 35.0 41.0 32.0 41.0 18 37.19837860735247 39.0 35.0 41.0 32.0 41.0 19 37.11127682580852 38.0 35.0 41.0 32.0 41.0 20 36.95679723395282 38.0 35.0 41.0 32.0 41.0 21 36.819259866862616 38.0 35.0 41.0 32.0 41.0 22 36.71529807279639 38.0 35.0 41.0 31.0 41.0 23 36.65487950564896 38.0 35.0 41.0 31.0 41.0 24 36.659248366438085 38.0 35.0 41.0 32.0 41.0 25 36.604020782511924 38.0 35.0 41.0 31.0 41.0 26 36.486619376821906 38.0 35.0 40.0 31.0 41.0 27 36.38653131218172 38.0 35.0 40.0 31.0 41.0 28 36.32053903362991 38.0 35.0 40.0 31.0 41.0 29 36.33688394232323 38.0 35.0 40.0 31.0 41.0 30 36.25572838189584 38.0 35.0 40.0 31.0 41.0 31 36.08563635992056 38.0 35.0 40.0 30.0 41.0 32 35.90397935125715 38.0 35.0 40.0 30.0 41.0 33 35.79584006049335 38.0 35.0 40.0 30.0 41.0 34 35.676328540560824 38.0 35.0 40.0 29.0 41.0 35 35.582196915508106 38.0 35.0 40.0 29.0 41.0 36 35.482429803749625 38.0 35.0 40.0 29.0 41.0 37 35.376140056220166 37.0 34.0 40.0 28.0 41.0 38 35.29127890666077 37.0 34.0 40.0 27.0 41.0 39 35.2107229846853 37.0 34.0 40.0 27.0 41.0 40 35.06412972999084 37.0 34.0 40.0 26.0 41.0 41 35.016596654658414 37.0 34.0 40.0 26.0 41.0 42 34.94314628577162 37.0 34.0 40.0 26.0 41.0 43 34.86092057275459 37.0 34.0 40.0 26.0 41.0 44 34.677238913423544 36.0 34.0 40.0 25.0 41.0 45 34.535849182801016 36.0 34.0 40.0 24.0 41.0 46 34.49908637580563 36.0 34.0 40.0 24.0 41.0 47 34.42469126283579 36.0 34.0 40.0 24.0 41.0 48 34.332908028188115 36.0 34.0 40.0 24.0 41.0 49 34.213414158341706 36.0 34.0 40.0 24.0 41.0 50 34.118047956212926 35.0 33.0 40.0 24.0 41.0 51 33.793385305095676 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 4.0 12 6.0 13 10.0 14 31.0 15 68.0 16 196.0 17 418.0 18 916.0 19 1761.0 20 3203.0 21 5137.0 22 7704.0 23 11380.0 24 16876.0 25 24029.0 26 30940.0 27 35337.0 28 39318.0 29 44642.0 30 52579.0 31 63392.0 32 78753.0 33 104004.0 34 189410.0 35 294861.0 36 153812.0 37 185202.0 38 286026.0 39 522869.0 40 75.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.190568908723044 23.820881352405333 29.412149947700005 13.576399791171612 2 30.21369609524358 26.338712584139817 30.074260414944238 13.373330905672365 3 29.401652791221778 25.25522953472515 31.505589503586684 13.83752817046639 4 25.709905042536707 27.93952894707018 31.29141964287373 15.059146367519382 5 23.00767685850762 32.10792191601903 30.24086793833989 14.643533287133458 6 21.716851744850356 41.4418448241587 26.637231277438918 10.204072153552033 7 88.04671141737623 3.796765761062424 6.418686053273534 1.7378367682878118 8 88.5766320291468 3.0123587760872916 6.111946135652988 2.299063059112925 9 84.24437194490943 5.214392809169127 7.792605914450962 2.748629331470475 10 46.929349492141995 28.642606193136533 13.082011589603916 11.34603272511756 11 38.66125954730316 22.859834163506683 23.24808961041615 15.230816678774007 12 35.89929975605723 22.598473546236722 25.61752077600926 15.884705921696787 13 23.001127747607484 34.10990615727899 26.44744640412009 16.441519690993438 14 16.34760265382979 37.68219069153037 29.100904613360928 16.869302041278907 15 15.41846496272116 27.05219409149433 41.85843330404038 15.670907641744126 16 19.417045524216846 23.343539418216004 39.89388582437979 17.345529233187364 17 19.07788518526088 24.363157024455585 27.791314671308946 28.767643118974583 18 22.30613238307747 27.00481754455718 31.55719278167215 19.1318572906932 19 25.999320007208667 28.423838020514975 26.286505487318877 19.290336484957482 20 28.180824203284406 27.286847341618348 25.16433159123887 19.367996863858384 21 22.932803335308904 28.9872473483068 28.799088140814245 19.280861175570053 22 22.275198284783208 25.263590101831706 28.592024762141865 23.869186851243214 23 19.44375289136279 30.288244485277044 26.899381503824493 23.368621119535675 24 20.515020223282878 26.682889263359723 34.16211325409993 18.63997725925747 25 19.425498986513475 27.366179833940556 32.024780720903834 21.183540458642135 26 17.970992547947855 33.48918049721222 26.975973588039558 21.563853366800373 27 18.028959146553312 32.71592093504582 29.960742492675212 19.29437742572565 28 16.01921815692227 29.943324644536556 35.08967172697732 18.94778547156385 29 17.123184595748 27.630420202102773 34.16791920347948 21.07847599866974 30 19.70162993900502 29.928089833364606 30.70427559401829 19.66600463361208 31 26.33077004538859 28.122904052273984 25.420397182674677 20.125928719662753 32 26.49914257739563 28.94632701707971 25.74854944160701 18.80598096391765 33 24.807521166169057 30.237709501877415 25.186208408501027 19.768560923452505 34 19.25113471474674 29.767892078083978 28.025224759912383 22.955748447256898 35 18.844764705773066 29.63347273804857 29.61280355825736 21.908958997921005 36 25.73925992259973 27.526098903650965 27.12246930278444 19.612171870964865 37 19.80516162834121 31.578279989818686 28.885991591127397 19.73056679071271 38 19.744175936058383 32.62720602852626 25.53437958089406 22.0942384545213 39 19.209006746048704 31.34985071742955 27.958572461035114 21.48257007548663 40 22.268277593122786 27.966329209406194 26.790043865108753 22.975349332362267 41 18.251814707538074 26.648936071388096 28.346642117564436 26.752607103509398 42 21.96214149423771 27.543423856599553 26.14609440752377 24.34834024163897 43 21.622423784141304 27.965678943075684 26.65079397518955 23.761103297593458 44 19.76085062267646 30.86526295841454 27.42684039305813 21.947046025850874 45 18.765292870665743 34.055423128301264 24.664648363837017 22.514635637195976 46 22.19725922031209 31.107533614124527 26.19449280155172 20.50071436401166 47 21.076200066512957 28.970293976118505 27.12428075899086 22.829225198377678 48 22.18374297015649 26.31311995927475 29.67318543180471 21.829951638764047 49 21.037648562632725 25.486677900791655 29.873049433246447 23.602624103329177 50 18.91573663098872 30.417461694668376 28.87646983414493 21.79033184019798 51 18.012748935885597 32.097099626375545 26.241126186968287 23.649025250770567 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2227.0 1 2835.0 2 3443.0 3 13887.5 4 24332.0 5 17210.0 6 10088.0 7 9825.0 8 9562.0 9 11265.0 10 12968.0 11 14206.5 12 15445.0 13 15494.0 14 15543.0 15 14416.0 16 13289.0 17 12432.0 18 11575.0 19 11025.0 20 10475.0 21 10683.0 22 10891.0 23 11554.0 24 12217.0 25 13752.0 26 17681.0 27 20075.0 28 24008.0 29 27941.0 30 33661.0 31 39381.0 32 41545.0 33 43709.0 34 52150.0 35 60591.0 36 63103.0 37 65615.0 38 76525.0 39 87435.0 40 109641.0 41 131847.0 42 157224.0 43 182601.0 44 186389.0 45 190177.0 46 192602.5 47 195028.0 48 191766.5 49 188505.0 50 173903.5 51 159302.0 52 146536.5 53 133771.0 54 117616.0 55 101461.0 56 94150.0 57 86839.0 58 81035.0 59 75231.0 60 68290.5 61 61350.0 62 54188.0 63 47026.0 64 40043.0 65 33060.0 66 27250.0 67 21440.0 68 17225.5 69 13011.0 70 10672.5 71 8334.0 72 7032.5 73 5731.0 74 4174.0 75 2182.0 76 1747.0 77 1276.0 78 805.0 79 640.0 80 475.0 81 346.5 82 218.0 83 172.0 84 126.0 85 115.0 86 104.0 87 67.5 88 31.0 89 26.0 90 21.0 91 16.5 92 12.0 93 7.5 94 3.0 95 1.5 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2152964.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.88736721400402 #Duplication Level Percentage of deduplicated Percentage of total 1 77.45923975427115 15.40460345110769 2 8.863101623515208 3.525275132837643 3 3.2365141895875804 1.930972385449885 4 1.6741843927704454 1.3318047921192075 5 0.9297196164469078 0.9244837709171314 6 0.6614590873405073 0.7892807860188376 7 0.45682132860782537 0.6359481459249117 8 0.36134817894386245 0.5749011141414582 9 0.2892920958465533 0.5177932327988327 >10 3.0027846652368706 14.572293553432056 >50 1.9479777575338098 28.778774465962975 >100 1.1113960525482298 29.083814457583895 >500 0.004265485858422464 0.5326807737072723 >1k 0.0016588000560531805 0.5608158194387809 >5k 0.0 0.0 >10k+ 2.369714365790258E-4 0.836558118559479 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17751 0.824491259491566 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3750 0.17417848138659078 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.6447595036424204E-5 0.0 0.0 0.06001029278706007 0.0 2 4.6447595036424204E-5 0.0 0.0 0.2193719913570315 0.0 3 4.6447595036424204E-5 0.0 0.0 0.3340511035019629 0.0 4 4.6447595036424204E-5 0.0 0.0 0.5688436964110872 0.0 5 4.6447595036424204E-5 0.0 0.0 1.022776042702061 0.0 6 4.6447595036424204E-5 0.0 0.0 1.62640898779543 0.0 7 4.6447595036424204E-5 0.0 0.0 1.9981755384669693 0.0 8 4.6447595036424204E-5 0.0 0.0 2.76363190466724 0.0 9 4.6447595036424204E-5 0.0 0.0 3.092434429930087 0.0 10 4.6447595036424204E-5 0.0 0.0 3.5843609089608557 0.0 11 4.6447595036424204E-5 0.0 0.0 4.172805490477314 0.0 12 4.6447595036424204E-5 0.0 0.0 4.601795478233728 0.0 13 4.6447595036424204E-5 0.0 0.0 4.780014900388488 0.0 14 4.6447595036424204E-5 0.0 0.0 4.851265511174362 0.0 15 4.6447595036424204E-5 0.0 0.0 4.957491161022665 0.0 16 4.6447595036424204E-5 0.0 0.0 5.198786417236889 0.0 17 4.6447595036424204E-5 0.0 0.0 5.4895483621649035 0.0 18 4.6447595036424204E-5 0.0 0.0 5.854719354341271 0.0 19 9.289519007284841E-5 0.0 0.0 6.046733712221848 0.0 20 9.289519007284841E-5 0.0 0.0 6.238608727317317 0.0 21 9.289519007284841E-5 0.0 0.0 6.491841015455901 0.0 22 9.289519007284841E-5 0.0 0.0 6.758961134510377 0.0 23 9.289519007284841E-5 0.0 0.0 7.041873435877237 0.0 24 9.289519007284841E-5 0.0 0.0 7.258458571532083 0.0 25 9.289519007284841E-5 0.0 0.0 7.437792735967717 0.0 26 9.289519007284841E-5 0.0 0.0 7.608998571271977 0.0 27 9.289519007284841E-5 0.0 0.0 7.784616928104697 0.0 28 9.289519007284841E-5 0.0 0.0 7.960560418102672 0.0 29 9.289519007284841E-5 0.0 0.0 8.166044578543811 0.0 30 9.289519007284841E-5 0.0 0.0 8.421645694029255 0.0 31 9.289519007284841E-5 0.0 0.0 8.644919283369346 0.0 32 9.289519007284841E-5 0.0 0.0 8.852214900016907 0.0 33 9.289519007284841E-5 0.0 0.0 9.062947638697164 0.0 34 9.289519007284841E-5 0.0 0.0 9.283480819930105 0.0 35 9.289519007284841E-5 0.0 0.0 9.550508043794508 0.0 36 9.289519007284841E-5 0.0 0.0 9.77819415466306 0.0 37 9.289519007284841E-5 0.0 0.0 10.008713568828833 0.0 38 9.289519007284841E-5 0.0 0.0 10.244063532878394 0.0 39 9.289519007284841E-5 0.0 0.0 10.576628313339192 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 20 7.0346624E-4 45.0 9 CGGTCTA 270 0.0 44.166664 31 CGTTTTT 6685 0.0 42.307404 1 TACGTAG 60 3.6379788E-12 41.250004 1 TCACGAC 290 0.0 41.12069 25 TAGTACG 100 0.0 40.5 1 ACGGTCT 290 0.0 40.344826 30 CCGCTCG 95 0.0 40.263157 19 TATACGA 40 3.4600998E-7 39.375 16 GCGTAAG 150 0.0 39.000004 1 TACGGGA 665 0.0 38.909775 4 TCGTAAG 145 0.0 38.793102 1 TGCGTAG 145 0.0 38.793102 1 ACCGCTC 105 0.0 38.57143 18 CGTTAGG 345 0.0 38.47826 2 GGGCGAT 2850 0.0 38.44737 7 CGCGTAA 100 0.0 38.25 31 TAAGGGA 2585 0.0 38.21083 4 ACGGGAT 655 0.0 38.129772 5 AGGGCGA 1500 0.0 37.8 6 >>END_MODULE