##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547909_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 918543 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.573742328883895 31.0 31.0 33.0 30.0 34.0 2 31.98657874481652 31.0 31.0 34.0 30.0 34.0 3 32.0301379467265 33.0 31.0 34.0 30.0 34.0 4 35.792536658599545 37.0 35.0 37.0 35.0 37.0 5 35.72163633058006 37.0 35.0 37.0 33.0 37.0 6 35.776742079576024 37.0 35.0 37.0 35.0 37.0 7 36.05565226668757 37.0 35.0 37.0 35.0 37.0 8 36.0833874951962 37.0 35.0 37.0 35.0 37.0 9 37.88411756444717 39.0 38.0 39.0 35.0 39.0 10 37.47333331155972 39.0 37.0 39.0 35.0 39.0 11 37.1149527022687 39.0 37.0 39.0 33.0 39.0 12 35.879746511594995 37.0 35.0 39.0 32.0 39.0 13 35.35174727802618 37.0 35.0 39.0 31.0 39.0 14 36.247257885586194 38.0 35.0 41.0 31.0 41.0 15 36.62432569841586 38.0 35.0 41.0 32.0 41.0 16 36.83954371216154 38.0 35.0 41.0 33.0 41.0 17 36.80065821632738 38.0 35.0 41.0 33.0 41.0 18 36.728723641680354 37.0 35.0 40.0 32.0 41.0 19 36.61859923814127 37.0 35.0 40.0 32.0 41.0 20 36.435713951333796 36.0 35.0 40.0 32.0 41.0 21 36.277063784711224 36.0 35.0 40.0 32.0 41.0 22 36.1629537212738 36.0 35.0 40.0 31.0 41.0 23 36.154076619167526 36.0 35.0 40.0 31.0 41.0 24 36.14134232148087 35.0 35.0 40.0 32.0 41.0 25 36.07301890058495 35.0 35.0 40.0 31.0 41.0 26 35.94262870654939 35.0 35.0 40.0 31.0 41.0 27 35.842747699345594 35.0 35.0 40.0 31.0 41.0 28 35.852838680388395 36.0 35.0 40.0 31.0 41.0 29 35.92205264206466 36.0 35.0 40.0 31.0 41.0 30 35.861664614503624 36.0 35.0 40.0 31.0 41.0 31 35.617197017450465 35.0 35.0 40.0 31.0 41.0 32 35.38119500121388 35.0 34.0 40.0 30.0 41.0 33 35.2782047220435 35.0 34.0 40.0 30.0 41.0 34 35.163781118575834 35.0 34.0 40.0 29.0 41.0 35 35.078935879975134 35.0 34.0 40.0 29.0 41.0 36 34.923681308332874 35.0 34.0 40.0 29.0 41.0 37 34.75035028300254 35.0 34.0 40.0 27.0 41.0 38 34.68837822508037 35.0 34.0 40.0 27.0 41.0 39 34.66776950017582 35.0 34.0 40.0 27.0 41.0 40 34.44255413192415 35.0 34.0 40.0 25.0 41.0 41 34.455758739656176 35.0 34.0 40.0 26.0 41.0 42 34.364579556972295 35.0 34.0 40.0 25.0 41.0 43 34.25526295448335 35.0 34.0 40.0 26.0 41.0 44 34.0763774804228 35.0 34.0 40.0 24.0 41.0 45 33.90676865427095 35.0 34.0 40.0 23.0 41.0 46 33.90519768807775 35.0 34.0 39.0 23.0 41.0 47 33.84929502483825 35.0 33.0 39.0 23.0 41.0 48 33.804459889194085 35.0 33.0 39.0 23.0 41.0 49 33.748524565534765 35.0 34.0 39.0 24.0 41.0 50 33.63017953432774 35.0 33.0 39.0 24.0 41.0 51 33.2774535323877 35.0 33.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 1.0 12 1.0 13 5.0 14 13.0 15 25.0 16 73.0 17 176.0 18 386.0 19 815.0 20 1353.0 21 2179.0 22 3338.0 23 5248.0 24 7614.0 25 10933.0 26 14041.0 27 15716.0 28 17133.0 29 19551.0 30 23019.0 31 27950.0 32 35617.0 33 48887.0 34 102363.0 35 183762.0 36 53842.0 37 64615.0 38 99778.0 39 180070.0 40 38.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.8731948313797 24.545067568965198 30.09810101432377 13.483636585331334 2 29.67155593151328 26.36969635607696 31.26266271693323 12.69608499547653 3 28.448967549695553 25.344376909954136 32.72595839280251 13.4806971475478 4 25.36658599542972 28.793099506501058 30.662473068762157 15.177841429307065 5 23.37821963696855 32.654105469205035 29.8803648822102 14.087310011616221 6 21.287408428347938 41.51531283783122 26.7031592424089 10.494119491411942 7 87.93328129439776 4.705060078842253 6.0006989329840845 1.3609596937759039 8 89.01564760713434 3.609629598178855 5.096114172118235 2.278608622568568 9 86.07087528836429 5.310039921919823 6.5578856950627245 2.061199094653163 10 57.14539221353818 23.574291023936823 10.552799379016552 8.727517383508447 11 51.81129244901981 18.75775004545242 17.511210689102196 11.919746816425578 12 47.168396035895974 20.184030578862394 20.138305991118543 12.509267394123084 13 21.20064057970068 46.29908452843253 20.240533105145868 12.259741786720927 14 13.984538557258617 48.26589500981446 24.559547021750753 13.190019411176179 15 11.666955167041717 24.399075492383044 51.20685694627252 12.727112394302717 16 13.954382102960885 18.728355667617087 49.683357229873835 17.633904999548196 17 14.706987043611457 19.153812069767014 26.266162825256956 39.873038061364575 18 22.023356554891823 24.17992407541073 33.36436073215952 20.432358637537927 19 28.60214491863745 27.185989115370756 24.12418362558966 20.08768234040214 20 31.71185235748354 24.629875792423437 23.684683242918407 19.973588607174623 21 20.76712794066255 29.207015893648965 28.2100021447009 21.815854020987587 22 21.89968243185131 24.83618077760105 25.856056820421035 27.408079970126604 23 18.130778853031376 32.40991439703966 22.551584411399357 26.907722338529606 24 20.29061241553199 25.369743169345366 37.88717566842271 16.452468746699935 25 16.21883787694207 25.872169294197437 35.168086850588374 22.74090597827211 26 15.68908586750974 37.28774809671403 25.74501139304311 21.27815464273311 27 17.61583290058277 35.48260669342644 28.96924803738094 17.932312368609853 28 13.26350535576451 30.46270016754795 40.21379510812232 16.05999936856522 29 13.415376307913728 26.130295478818084 38.92599475473658 21.52833345853161 30 17.956589947340518 31.23892947853285 33.32288199899188 17.48159857513475 31 30.78865115732198 27.87828114742587 22.95722682552695 18.375840869725206 32 30.0680534280921 28.66136914657234 24.784141842025903 16.486435583309657 33 27.373568793186603 29.92086380278332 23.55719873756591 19.148368666464172 34 18.188478928041473 30.652130602486764 27.290611326851327 23.868779142620433 35 17.75627270579603 27.871531327330345 30.52584364586089 23.846352321012734 36 31.58828710250908 23.268916098647534 27.622550060258476 17.52024673858491 37 19.444380938072577 31.507506997494943 31.037196952129626 18.010915112302854 38 19.555535233516558 33.371763760651376 22.798388317150096 24.274312688681967 39 18.85801753429072 32.20491582865473 28.014366229996853 20.922700407057697 40 22.590885783245856 27.62004609473917 25.032578768767493 24.75648935324748 41 16.2610786865721 23.609782013471335 28.822711620468507 31.30642767948806 42 23.436246316176813 25.172583101716523 24.420740237528346 26.97043034457832 43 23.83731627153002 26.63239499947199 25.260221894892236 24.27006683410575 44 19.402466732640715 32.613933152830086 26.42500133363381 21.558598780895398 45 17.046561783171825 39.274808038382524 20.47187774551654 23.206752432929107 46 24.091849809970793 32.221246038563244 24.774561452212907 18.912342699253056 47 21.5651308648588 28.436229985966904 27.032376274164626 22.96626287500966 48 24.091740941904735 23.81162340794062 29.83115651635253 22.265479133802117 49 20.656191381350684 22.587619741264152 31.155318803801237 25.600870073583927 50 18.37507879326281 31.95310399186538 28.10222275930468 21.56959445556713 51 17.532439961983272 34.40905869404045 23.68174380513487 24.376757538841403 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1134.0 1 1319.5 2 1505.0 3 3708.5 4 5912.0 5 4648.5 6 3385.0 7 3698.5 8 4012.0 9 4468.5 10 4925.0 11 5258.5 12 5592.0 13 5500.0 14 5408.0 15 5117.0 16 4826.0 17 4662.5 18 4499.0 19 4558.5 20 4618.0 21 4219.5 22 3821.0 23 4118.0 24 4415.0 25 4813.0 26 5485.5 27 5760.0 28 6232.5 29 6705.0 30 8651.5 31 10598.0 32 12482.5 33 14367.0 34 16678.0 35 18989.0 36 20317.0 37 21645.0 38 29219.0 39 36793.0 40 50684.0 41 64575.0 42 81056.5 43 97538.0 44 100569.0 45 103600.0 46 100050.5 47 96501.0 48 89833.5 49 83166.0 50 75245.5 51 67325.0 52 62414.5 53 57504.0 54 49136.5 55 40769.0 56 37627.0 57 34485.0 58 31531.5 59 28578.0 60 25713.5 61 22849.0 62 19838.0 63 16827.0 64 14933.5 65 13040.0 66 9769.5 67 6499.0 68 5386.5 69 4274.0 70 3526.5 71 2779.0 72 2325.5 73 1872.0 74 1555.0 75 938.0 76 638.0 77 402.5 78 167.0 79 135.5 80 104.0 81 78.0 82 52.0 83 36.0 84 20.0 85 14.5 86 9.0 87 8.5 88 8.0 89 5.0 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 918543.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.17876067663382 #Duplication Level Percentage of deduplicated Percentage of total 1 79.6927110787601 16.081001445304246 2 8.248950173849408 3.329071827831683 3 2.6037125669772068 1.5761907827933088 4 1.1078707008537914 0.8942183093273295 5 0.6444110129668601 0.6501707804022723 6 0.4375794375818883 0.529788644878857 7 0.30553983930103246 0.43157907061028833 8 0.2063790581534 0.3331578898517242 9 0.19916727031817605 0.3617053814132018 >10 3.113376334513359 17.23398178641566 >50 2.8634558697485732 41.825846411853966 >100 0.5719256902342956 15.412640699599342 >500 0.0038274185770937564 0.4789522257876969 >1k 0.0010935481648839303 0.8616947439304107 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4020 0.4376496255482868 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3790 0.41260997035522556 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07642538237186501 0.0 2 0.0 0.0 0.0 0.25649316362979196 0.0 3 0.0 0.0 0.0 0.3674297229416587 0.0 4 0.0 0.0 0.0 0.6848890035632518 0.0 5 0.0 0.0 0.0 1.0780115900943124 0.0 6 0.0 0.0 0.0 1.5658493940947784 0.0 7 0.0 0.0 0.0 1.7864160959258304 0.0 8 0.0 0.0 0.0 2.3490462613073095 0.0 9 0.0 0.0 0.0 2.5188804443558985 0.0 10 0.0 0.0 0.0 2.855173900405316 0.0 11 0.0 0.0 0.0 3.3019684435023726 0.0 12 0.0 0.0 0.0 3.627701697144282 0.0 13 0.0 0.0 0.0 3.7545329941004395 0.0 14 0.0 0.0 0.0 3.805592117081073 0.0 15 0.0 0.0 0.0 3.889638264076913 0.0 16 0.0 0.0 0.0 4.0903909778856296 0.0 17 0.0 0.0 0.0 4.319013916604884 0.0 18 0.0 0.0 0.0 4.672290790959161 0.0 19 0.0 0.0 0.0 4.804674359284214 0.0 20 0.0 0.0 0.0 4.954041345914127 0.0 21 0.0 0.0 0.0 5.155120663921014 0.0 22 0.0 0.0 0.0 5.327132208290739 0.0 23 0.0 0.0 0.0 5.546936833659394 0.0 24 0.0 0.0 0.0 5.688247583401104 0.0 25 0.0 0.0 0.0 5.8150788803572615 0.0 26 0.0 0.0 0.0 5.93951507986017 0.0 27 0.0 0.0 0.0 6.046423520727935 0.0 28 0.0 0.0 0.0 6.164001032069266 0.0 29 0.0 0.0 0.0 6.298126489451229 0.0 30 0.0 0.0 0.0 6.4818957849550864 0.0 31 0.0 0.0 0.0 6.675463206404055 0.0 32 0.0 0.0 0.0 6.818515845202675 0.0 33 0.0 0.0 0.0 6.956233948764511 0.0 34 0.0 0.0 0.0 7.1199715201139195 0.0 35 0.0 0.0 0.0 7.360134473835194 0.0 36 0.0 0.0 0.0 7.522347892259807 0.0 37 0.0 0.0 0.0 7.687391880401897 0.0 38 0.0 0.0 0.0 7.851564924015533 0.0 39 0.0 0.0 0.0 8.05503933947567 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 35 1.2115743E-7 45.000004 1 TCGATAG 35 1.2115743E-7 45.000004 1 CGCCTAA 85 0.0 45.000004 30 TAGGACG 35 1.2115743E-7 45.000004 1 CACCGGG 60 0.0 45.000004 3 AGTCGGT 30 2.165023E-6 45.000004 12 ATTTACG 25 3.8901915E-5 45.0 1 ACAACGA 20 7.032547E-4 45.0 14 CTTAACG 20 7.032547E-4 45.0 1 CGGAATA 20 7.032547E-4 45.0 10 CGGGTAT 45 3.8380676E-10 45.0 6 AGGTACG 25 3.8901915E-5 45.0 1 GTCGATG 25 3.8901915E-5 45.0 1 CCCTCCG 20 7.032547E-4 45.0 44 CGAAACG 20 7.032547E-4 45.0 35 CGACGCA 20 7.032547E-4 45.0 14 ACGTTAG 55 1.8189894E-12 45.0 1 TTTGTCG 20 7.032547E-4 45.0 1 CGTGATT 20 7.032547E-4 45.0 13 GCTATTG 50 2.1827873E-11 45.0 1 >>END_MODULE