##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547908_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3320903 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.452834665752057 31.0 31.0 33.0 30.0 34.0 2 31.885090591324108 31.0 31.0 34.0 30.0 34.0 3 31.959324316307946 33.0 31.0 34.0 30.0 34.0 4 35.731805174676886 37.0 35.0 37.0 35.0 37.0 5 35.6427363280409 37.0 35.0 37.0 33.0 37.0 6 35.67960973265404 37.0 35.0 37.0 33.0 37.0 7 35.9852157681209 37.0 35.0 37.0 35.0 37.0 8 35.99769791529593 37.0 35.0 37.0 35.0 37.0 9 37.73183077012487 39.0 38.0 39.0 35.0 39.0 10 37.26176103306842 39.0 37.0 39.0 34.0 39.0 11 37.006683423153284 39.0 37.0 39.0 33.0 39.0 12 36.370486581511116 38.0 35.0 39.0 32.0 39.0 13 36.12337397388602 38.0 35.0 39.0 32.0 39.0 14 37.01415127150658 39.0 35.0 41.0 31.0 41.0 15 37.257204441081235 39.0 35.0 41.0 32.0 41.0 16 37.393205402265586 39.0 35.0 41.0 32.0 41.0 17 37.34744013902243 39.0 35.0 41.0 32.0 41.0 18 37.25416400298353 39.0 35.0 41.0 32.0 41.0 19 37.20049908112342 39.0 35.0 41.0 32.0 41.0 20 37.03737868886866 39.0 35.0 41.0 32.0 41.0 21 36.92064266857538 39.0 35.0 41.0 32.0 41.0 22 36.87659892505141 39.0 35.0 41.0 31.0 41.0 23 36.79124111725034 38.0 35.0 41.0 31.0 41.0 24 36.83194600986539 38.0 35.0 41.0 32.0 41.0 25 36.78396779430173 38.0 35.0 41.0 31.0 41.0 26 36.676448243143504 38.0 35.0 41.0 31.0 41.0 27 36.60179053709187 38.0 35.0 41.0 31.0 41.0 28 36.52595152583499 38.0 35.0 41.0 31.0 41.0 29 36.520354554167945 38.0 35.0 41.0 31.0 41.0 30 36.42685769503054 38.0 35.0 40.0 31.0 41.0 31 36.246971079853886 38.0 35.0 40.0 30.0 41.0 32 36.12106195212567 38.0 35.0 40.0 30.0 41.0 33 36.02007917725992 38.0 35.0 40.0 30.0 41.0 34 35.88139039291422 38.0 35.0 40.0 29.0 41.0 35 35.78953676153745 38.0 35.0 40.0 29.0 41.0 36 35.66835737147397 38.0 35.0 40.0 29.0 41.0 37 35.56317122180322 38.0 34.0 40.0 28.0 41.0 38 35.41984333779096 38.0 34.0 40.0 27.0 41.0 39 35.34071937662738 38.0 34.0 40.0 27.0 41.0 40 35.18474402895839 38.0 34.0 40.0 26.0 41.0 41 35.097069381430295 38.0 34.0 40.0 26.0 41.0 42 35.03879366545786 37.0 34.0 40.0 26.0 41.0 43 34.97415311437883 37.0 34.0 40.0 26.0 41.0 44 34.81822112840995 37.0 34.0 40.0 25.0 41.0 45 34.684632161794546 37.0 34.0 40.0 24.0 41.0 46 34.66615736743891 37.0 34.0 40.0 24.0 41.0 47 34.567458911025106 37.0 34.0 40.0 24.0 41.0 48 34.462076429212175 36.0 34.0 40.0 24.0 41.0 49 34.33530247646499 36.0 34.0 40.0 24.0 41.0 50 34.26225638026766 36.0 33.0 40.0 24.0 41.0 51 33.92694487011514 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 1.0 10 10.0 11 6.0 12 14.0 13 17.0 14 51.0 15 117.0 16 317.0 17 749.0 18 1639.0 19 3031.0 20 5301.0 21 8227.0 22 12341.0 23 17803.0 24 25822.0 25 36253.0 26 46803.0 27 53878.0 28 60309.0 29 68351.0 30 80179.0 31 97211.0 32 120429.0 33 157850.0 34 275294.0 35 385672.0 36 231339.0 37 303523.0 38 478509.0 39 849736.0 40 118.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.044478866139723 25.23647935516334 30.8177324059149 13.901309372782041 2 31.27068149837559 26.590177430656663 28.625617791305558 13.513523279662188 3 29.36406152182102 25.57223140814411 30.925413961202718 14.138293108832144 4 26.733752837707094 27.03282811933983 30.617726564130297 15.61569247882278 5 23.722463438408166 31.620736889936264 29.202569301181036 15.454230370474537 6 22.301404166276463 40.37787312667669 26.6310096982658 10.689713008781046 7 88.4177586638333 3.664816467087416 6.147123237264082 1.770301631815202 8 88.91976067955011 2.9357978838888097 5.870029928606767 2.2744115079543126 9 83.91687441638615 5.448969753106309 7.6312978728978225 3.0028579576097227 10 44.26865223103475 31.314284096825475 13.623794492040266 10.793269180099509 11 36.83284335615946 21.293124189414748 25.10214842167928 16.771884032746513 12 34.966694299713055 20.34678519667693 27.592886633545156 17.09363387006486 13 25.03033060586232 29.185013835092445 28.25936198678492 17.525293572260317 14 19.14045667699418 32.44084515567001 30.70682883541013 17.711869331925683 15 17.48072738047453 25.513512439237157 40.23556243587964 16.770197744408673 16 22.11877311682997 22.683800159173575 36.90550431614534 18.291922407851118 17 22.50607741328187 22.66302267786804 27.86148827592977 26.969411632920327 18 23.995822822888833 25.45587751283311 31.323679131850586 19.224620532427476 19 27.265566022253584 26.739925857515264 26.321154216187587 19.67335390404357 20 27.222324771304674 27.10332099431992 26.280863969829895 19.393490264545516 21 24.025453317968033 26.058394358401916 30.849922445792604 19.066229877837443 22 23.524806355379845 23.148764056041387 29.923818913108875 23.402610675469894 23 20.55070563638866 27.81174276996347 28.70381941297292 22.933732180674955 24 21.338714199119938 26.952337963499684 32.074499014274124 19.634448823106247 25 21.98474330626339 26.6363094616133 29.770758134158086 21.608189097965223 26 19.809792697949923 30.09097224459733 26.8421872002886 23.25704785716415 27 19.649384519812834 29.09148505692578 30.478728225425435 20.78040219783595 28 18.007993608967197 27.18007722598341 33.7398593093505 21.072069855698885 29 19.629570631843208 26.354307849401202 32.40970904600345 21.60641247275214 30 22.19218688410953 26.396284384096734 31.121113745267476 20.290414986526255 31 25.862363339127942 25.964444008150796 27.240512595519956 20.93268005720131 32 26.9775720639838 26.269511635841212 26.90966884609397 19.843247454081016 33 25.33461531396732 25.901057634023033 27.622547240916102 21.14177981109355 34 20.32667018578983 26.358764468579782 30.530732153272773 22.783833192357623 35 20.61773559781782 27.0701673611063 30.026682501717154 22.285414539358722 36 26.488789344343992 25.059720202607544 28.122471508502358 20.329018944546107 37 21.040271275613893 28.78783270694748 29.056434349332093 21.115461668106537 38 21.216398070042995 29.14665077540657 26.667897255656065 22.96905389889437 39 20.24030813305899 27.58376260914577 28.973806220777902 23.20212303701734 40 22.562387398849047 25.234371494741037 29.01289197546571 23.190349130944206 41 19.31622212392232 24.69310305058594 29.512244109508767 26.47843071598297 42 22.06959974440687 26.359095703789 27.517455342718534 24.0538492090856 43 21.72357939994032 25.997958988865378 28.320128591530676 23.958333019663627 44 21.597800357312455 27.29203472669933 28.268757021810032 22.841407894178182 45 19.953639115626082 29.168271400881025 26.352380662729384 24.52570882076351 46 22.597769341651954 27.191007987887634 28.146561341900078 22.064661328560334 47 21.315015825514926 26.921322303000117 29.2156380357993 22.548023835685655 48 21.765284924010125 26.48797631246682 29.229489690002993 22.517249073520063 49 21.659801566019844 24.863026712915133 30.021924759621104 23.45524696144392 50 20.109801460626823 27.359094800420248 29.78999988858452 22.741103850368408 51 19.554530800809296 29.254362442986135 27.360570302715857 23.830536453488705 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2085.0 1 3659.0 2 5233.0 3 15363.5 4 25494.0 5 18907.5 6 12321.0 7 11583.5 8 10846.0 9 11600.5 10 12355.0 11 12547.5 12 12740.0 13 12655.0 14 12570.0 15 12182.5 16 11795.0 17 11818.0 18 11841.0 19 11438.5 20 11036.0 21 12641.0 22 14246.0 23 15717.5 24 17189.0 25 21214.0 26 28599.5 27 31960.0 28 36720.0 29 41480.0 30 51805.5 31 62131.0 32 71155.5 33 80180.0 34 88873.5 35 97567.0 36 101871.0 37 106175.0 38 117891.5 39 129608.0 40 159400.5 41 189193.0 42 215157.0 43 241121.0 44 251792.0 45 262463.0 46 273613.0 47 284763.0 48 285382.0 49 286001.0 50 274602.5 51 263204.0 52 238815.0 53 214426.0 54 196102.5 55 177779.0 56 171862.5 57 165946.0 58 148820.5 59 131695.0 60 119744.5 61 107794.0 62 96335.0 63 84876.0 64 74916.0 65 64956.0 66 53263.0 67 41570.0 68 34396.0 69 27222.0 70 23104.0 71 18986.0 72 15181.0 73 11376.0 74 9502.5 75 5293.0 76 2957.0 77 2183.0 78 1409.0 79 1097.5 80 786.0 81 543.5 82 301.0 83 244.5 84 188.0 85 130.5 86 73.0 87 60.5 88 48.0 89 33.5 90 19.0 91 16.5 92 14.0 93 10.5 94 7.0 95 8.0 96 9.0 97 5.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3320903.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.834084746377997 #Duplication Level Percentage of deduplicated Percentage of total 1 77.53793836704122 14.603561022642886 2 8.596369863550935 3.238095170426563 3 3.006424818648544 1.6986977945412232 4 1.5259456815604875 1.14959161139519 5 0.9523056341511941 0.8967902509028415 6 0.6558045279253178 0.741088683360231 7 0.4730644928562324 0.6236815724269626 8 0.35563639475516456 0.5358468798172087 9 0.298879828272207 0.5066215213195484 >10 3.3011398155224483 15.189518071785852 >50 2.0826993080541114 29.24063877598645 >100 1.2053433042257362 29.578858833156758 >500 0.006011050906704961 0.7718654356559882 >1k 0.002111990859112554 0.6066055760675481 >5k 1.624608353163503E-4 0.15338783116401605 >10k+ 1.624608353163503E-4 0.46515096935076244 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15202 0.4577670591402399 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5013 0.15095291852848458 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.0112291747154314E-5 0.0 0.0 0.020928042764272247 0.0 2 3.0112291747154314E-5 0.0 0.0 0.12538758283515056 0.0 3 3.0112291747154314E-5 0.0 0.0 0.23063004249145488 0.0 4 3.0112291747154314E-5 0.0 0.0 0.4560807708023992 0.0 5 3.0112291747154314E-5 0.0 0.0 0.8914442848827563 0.0 6 3.0112291747154314E-5 0.0 0.0 1.4158799579511958 0.0 7 3.0112291747154314E-5 0.0 0.0 1.6967674153686512 0.0 8 3.0112291747154314E-5 0.0 0.0 2.3364428289534502 0.0 9 3.0112291747154314E-5 0.0 0.0 2.620130729503391 0.0 10 3.0112291747154314E-5 0.0 0.0 3.107769182056808 0.0 11 3.0112291747154314E-5 0.0 0.0 3.6719530802314915 0.0 12 3.0112291747154314E-5 0.0 0.0 4.125715204569359 0.0 13 3.0112291747154314E-5 0.0 0.0 4.3090689490177825 0.0 14 6.022458349430863E-5 0.0 0.0 4.393353253618067 0.0 15 6.022458349430863E-5 0.0 0.0 4.50136604411511 0.0 16 6.022458349430863E-5 0.0 0.0 4.720101731366438 0.0 17 6.022458349430863E-5 0.0 0.0 4.974098912253686 0.0 18 6.022458349430863E-5 0.0 0.0 5.308495912105834 0.0 19 6.022458349430863E-5 0.0 0.0 5.4838698992412604 0.0 20 6.022458349430863E-5 0.0 0.0 5.684598436027791 0.0 21 6.022458349430863E-5 0.0 0.0 5.92883923438896 0.0 22 6.022458349430863E-5 0.0 0.0 6.198494806984726 0.0 23 6.022458349430863E-5 0.0 0.0 6.461465450812625 0.0 24 6.022458349430863E-5 0.0 0.0 6.663247917810306 0.0 25 6.022458349430863E-5 0.0 0.0 6.830310912423519 0.0 26 6.022458349430863E-5 0.0 0.0 7.00679905435359 0.0 27 6.022458349430863E-5 0.0 0.0 7.212646680737137 0.0 28 6.022458349430863E-5 0.0 0.0 7.409310058137802 0.0 29 6.022458349430863E-5 0.0 0.0 7.634339214364286 0.0 30 6.022458349430863E-5 0.0 0.0 7.894148067558733 0.0 31 6.022458349430863E-5 0.0 0.0 8.108848707715943 0.0 32 6.022458349430863E-5 0.0 0.0 8.311353869715557 0.0 33 6.022458349430863E-5 0.0 0.0 8.52009227610683 0.0 34 6.022458349430863E-5 0.0 0.0 8.755991969654037 0.0 35 6.022458349430863E-5 0.0 0.0 9.019625083900372 0.0 36 6.022458349430863E-5 0.0 0.0 9.243088400956005 0.0 37 6.022458349430863E-5 0.0 0.0 9.492568738081179 0.0 38 6.022458349430863E-5 0.0 0.0 9.817480366032974 0.0 39 6.022458349430863E-5 0.0 0.0 10.43601695081127 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATCG 20 7.0352154E-4 45.0 31 CGACGGT 610 0.0 41.311474 28 CACGACG 600 0.0 41.25 26 TCACGAC 615 0.0 40.97561 25 CGTTTTT 8030 0.0 40.488792 1 ATACGTA 45 1.9301297E-8 40.0 12 TACGGGA 1170 0.0 39.423077 4 TACGTTG 160 0.0 39.375 1 CGGTCTA 640 0.0 39.023438 31 CGTTAGG 475 0.0 38.842106 2 GGGCGAT 3930 0.0 37.671753 7 TAGACGC 30 1.1403863E-4 37.500004 12 ACGGGAC 935 0.0 37.299465 5 TTAGGGA 3940 0.0 37.290607 4 ACGGGAT 1425 0.0 37.105267 5 TACGCGG 285 0.0 37.10526 2 CTCACGA 680 0.0 37.058823 24 ACGTTAG 225 0.0 37.0 1 AGGGCGA 1910 0.0 36.871727 6 GACCGAT 1380 0.0 36.847828 9 >>END_MODULE