##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547907_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2338956 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.446381205973946 31.0 31.0 33.0 30.0 34.0 2 31.816309926309003 31.0 31.0 34.0 30.0 34.0 3 31.626238373017706 31.0 31.0 34.0 30.0 34.0 4 35.563638221497115 37.0 35.0 37.0 33.0 37.0 5 35.58767031102766 37.0 35.0 37.0 33.0 37.0 6 35.66586716466663 37.0 35.0 37.0 33.0 37.0 7 35.99904487301172 37.0 35.0 37.0 35.0 37.0 8 36.03768604454295 37.0 35.0 37.0 35.0 37.0 9 37.78917859079008 39.0 38.0 39.0 35.0 39.0 10 37.353331571863684 39.0 37.0 39.0 34.0 39.0 11 37.074085190144665 39.0 37.0 39.0 33.0 39.0 12 36.735187408399305 39.0 35.0 39.0 33.0 39.0 13 36.645342622948014 39.0 35.0 39.0 33.0 39.0 14 37.745737842011565 40.0 36.0 41.0 33.0 41.0 15 37.888315556171214 40.0 36.0 41.0 33.0 41.0 16 37.940212214338366 40.0 36.0 41.0 33.0 41.0 17 37.85912817513455 40.0 36.0 41.0 33.0 41.0 18 37.66837212841969 39.0 36.0 41.0 33.0 41.0 19 37.52528136484825 39.0 36.0 41.0 33.0 41.0 20 37.276681989742436 39.0 35.0 41.0 32.0 41.0 21 37.18186319024385 39.0 35.0 41.0 32.0 41.0 22 37.120978761464514 39.0 35.0 41.0 32.0 41.0 23 37.01446756587127 39.0 35.0 41.0 32.0 41.0 24 37.02446903661291 39.0 35.0 41.0 32.0 41.0 25 36.98153535166972 39.0 35.0 41.0 32.0 41.0 26 36.88402774571219 39.0 35.0 41.0 32.0 41.0 27 36.807084870343864 39.0 35.0 41.0 31.0 41.0 28 36.725575855210614 38.0 35.0 41.0 31.0 41.0 29 36.695482086879785 38.0 35.0 41.0 31.0 41.0 30 36.56547964134426 38.0 35.0 41.0 31.0 41.0 31 36.372442234911645 38.0 35.0 41.0 30.0 41.0 32 36.147813383406955 38.0 35.0 41.0 30.0 41.0 33 35.916455461325484 38.0 35.0 41.0 29.0 41.0 34 35.63569943171227 38.0 35.0 41.0 27.0 41.0 35 35.42066759699627 38.0 35.0 41.0 25.0 41.0 36 35.29465624834328 38.0 35.0 41.0 25.0 41.0 37 35.18728740514999 38.0 34.0 40.0 24.0 41.0 38 35.057733450308596 38.0 34.0 40.0 24.0 41.0 39 34.95235053588011 38.0 34.0 40.0 23.0 41.0 40 34.816601081850195 38.0 34.0 40.0 23.0 41.0 41 34.70856185409217 38.0 34.0 40.0 23.0 41.0 42 34.646150248230406 38.0 34.0 40.0 23.0 41.0 43 34.59692230208692 38.0 34.0 40.0 23.0 41.0 44 34.415746170513685 38.0 34.0 40.0 22.0 41.0 45 34.28478047470752 38.0 33.0 40.0 22.0 41.0 46 34.25983173689458 37.0 33.0 40.0 22.0 41.0 47 34.18333393189098 37.0 33.0 40.0 22.0 41.0 48 34.08374078007453 37.0 33.0 40.0 21.0 41.0 49 33.94608064452687 37.0 33.0 40.0 20.0 41.0 50 33.87673987881773 37.0 33.0 40.0 20.0 41.0 51 33.57245668580341 36.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 7.0 12 3.0 13 14.0 14 25.0 15 90.0 16 198.0 17 505.0 18 992.0 19 1936.0 20 3410.0 21 5609.0 22 8678.0 23 13068.0 24 20639.0 25 32495.0 26 45712.0 27 51635.0 28 51096.0 29 51155.0 30 55347.0 31 64423.0 32 76938.0 33 98697.0 34 157148.0 35 216143.0 36 168058.0 37 219264.0 38 353985.0 39 641587.0 40 94.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.764751453212458 22.590933732827807 28.27034796721272 18.37396684674701 2 34.891806429877256 24.701191471750644 27.534036553060425 12.872965545311668 3 27.411631514231132 24.356379512910888 35.164962487537174 13.0670264853208 4 24.19446966937386 26.631582637723838 35.01318536988297 14.16076232301933 5 21.85650349985207 30.55893313084983 33.42606701451417 14.158496354783928 6 20.58076338332145 38.801841505355384 30.634394148500444 9.98300096282273 7 84.42014300397271 2.822498584838706 11.104612485228452 1.6527459259601294 8 85.01083389341227 2.199400074221148 10.878143924041323 1.911622108325253 9 80.19223106377376 4.846179235522173 12.316349687638418 2.645240013065658 10 38.59345793593381 35.38852376872417 16.881335091382653 9.136683203959374 11 27.14364870480676 23.211167717562876 32.30860264152041 17.336580936109957 12 26.914101847148896 21.388559682182994 33.48737641922293 18.209962051445174 13 23.337078594039394 24.54086353056663 33.82684411335656 18.29521376203742 14 17.467066503174923 28.71824010370439 34.51967458985975 19.29501880326094 15 17.150814294924743 26.13730228358293 39.30672488067326 17.405158540819066 16 22.024740952801164 24.530944575272045 36.30538582170849 17.1389286502183 17 21.24405076452913 24.545096188213886 32.21727984622199 21.99357320103499 18 21.88647413632407 25.324161720015255 34.44780491809166 18.341559225569014 19 23.53148156698972 27.09020605774542 30.746666461446903 18.63164591381796 20 24.12499422819412 26.887295015382932 30.980745255575563 18.006965500847386 21 23.21279237403354 25.52339590825993 33.65544285570144 17.6083688620051 22 22.27109017869511 22.50247546341188 33.53419217804866 21.69224217984434 23 19.673050711514026 26.73928026008185 33.18288159332625 20.40478743507787 24 19.774591740930568 25.898349520042274 35.31139534048524 19.015663398541914 25 20.790814363331332 26.925901983620044 32.49325767564674 19.790025977401886 26 19.371206640911588 28.14896902720701 31.472417608539878 21.007406723341525 27 18.799968875002353 27.457292911880344 34.07439045454468 19.668347758572626 28 17.940867634961926 26.847961227145788 35.41152548401937 19.799645653872926 29 19.214341783257147 25.88975594239481 34.480768342799095 20.415133931548947 30 20.949090106868194 25.369951380017408 34.027147154542455 19.653811358571943 31 23.15776782461919 24.893413984700867 31.508160050894503 20.44065813978544 32 23.51750097051847 25.886079088276993 30.907763976748605 19.688655964455936 33 21.923712972796412 25.621944149441035 31.068947000285597 21.38539587747696 34 19.572364764450466 26.146066877700992 32.52976969211905 21.751798665729495 35 19.16162595619584 27.360882376581692 32.01757536268318 21.459916304539288 36 22.490247785764247 26.818247115379684 30.248110695541087 20.443394403314983 37 19.897296058583404 29.150954528430635 30.341229163780763 20.6105202492052 38 19.871045030346874 29.39721824608928 29.570457930803318 21.16127879276053 39 19.423366664443453 28.70520009782142 29.73536056257578 22.136072675159344 40 21.9380783563265 26.647529923606943 30.294840946131522 21.119550773935035 41 19.15174975501891 27.023039338918732 30.873817207335236 22.951393698727124 42 20.91005559745459 27.35070689658121 29.44189629903256 22.29734120693164 43 20.575248102144716 27.16160543421937 29.836003755521695 22.427142708114218 44 20.672000670384566 28.436362206044063 29.78187704257797 21.1097600809934 45 19.887377103288816 28.560007114285174 28.866126596652524 22.686489185773482 46 21.19582411982098 27.94640001778571 29.51782761197731 21.339948250415997 47 20.36887397625265 27.40359374011311 30.64422759555973 21.58330468807451 48 20.727153482151866 26.66706855537257 31.005371627341425 21.60040633513414 49 20.90402726686607 26.121012964758638 30.689333189679495 22.285626578695794 50 19.136614797371134 27.201537780103603 31.686957770902918 21.974889651622348 51 18.84101282794546 27.793596801307935 30.84850676968699 22.516883601059618 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1353.0 1 2360.0 2 3367.0 3 33037.5 4 62708.0 5 44404.0 6 26100.0 7 23096.5 8 20093.0 9 20120.0 10 20147.0 11 20125.0 12 20103.0 13 19477.5 14 18852.0 15 17508.0 16 16164.0 17 15413.5 18 14663.0 19 14075.5 20 13488.0 21 13942.5 22 14397.0 23 14769.5 24 15142.0 25 16803.5 26 22156.5 27 25848.0 28 29197.5 29 32547.0 30 39098.5 31 45650.0 32 52017.0 33 58384.0 34 65626.5 35 72869.0 36 78218.5 37 83568.0 38 90194.5 39 96821.0 40 110044.5 41 123268.0 42 134881.0 43 146494.0 44 152548.5 45 158603.0 46 168964.0 47 179325.0 48 185834.0 49 192343.0 50 183569.0 51 174795.0 52 159298.5 53 143802.0 54 131949.0 55 120096.0 56 113477.5 57 106859.0 58 99418.5 59 91978.0 60 83311.0 61 74644.0 62 64316.5 63 53989.0 64 45200.5 65 36412.0 66 29316.5 67 22221.0 68 18170.0 69 14119.0 70 11360.5 71 8602.0 72 6731.5 73 4861.0 74 3766.5 75 2113.0 76 1554.0 77 1133.5 78 713.0 79 572.0 80 431.0 81 300.0 82 169.0 83 170.5 84 172.0 85 112.0 86 52.0 87 39.0 88 26.0 89 19.5 90 13.0 91 9.5 92 6.0 93 5.5 94 5.0 95 3.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2338956.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.8711066893469 #Duplication Level Percentage of deduplicated Percentage of total 1 74.20238154900623 18.454953481089596 2 7.037949019264078 3.500831618646025 3 2.988387415004003 2.2297350668299845 4 1.7492770352051565 1.740258230872475 5 1.2151165005366815 1.5110646062416826 6 0.9148820116837806 1.3652476872450972 7 0.7491658026191246 1.3042807823465312 8 0.6563144441132488 1.305861324904001 9 0.5714363992746508 1.2791030087282467 >10 9.402112510716695 55.62428687115797 >50 0.4705353694436525 7.061934012034852 >100 0.03702786213663829 1.602975215976561 >500 0.0036676032554594858 0.6323099957317285 >1k 0.0015718299666254937 0.6472522667032004 >5k 0.0 0.0 >10k+ 1.746477740694993E-4 1.7399058314920741 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40056 1.712558936551179 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4045 0.1729404058904913 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.044378774119735474 0.0 2 0.0 0.0 0.0 0.1374117341241135 0.0 3 0.0 0.0 0.0 0.25891893648277264 0.0 4 0.0 0.0 0.0 0.3949197847244668 0.0 5 0.0 0.0 0.0 0.751403617682419 0.0 6 0.0 0.0 0.0 1.339144473004195 0.0 7 0.0 0.0 0.0 1.726967074198916 0.0 8 0.0 0.0 0.0 2.454855927174346 0.0 9 0.0 0.0 0.0 2.9340013236674825 0.0 10 0.0 0.0 0.0 3.5037426954589996 0.0 11 0.0 0.0 0.0 3.973866973128182 0.0 12 0.0 0.0 0.0 4.309657813143984 0.0 13 0.0 0.0 0.0 4.4888403202112395 0.0 14 0.0 0.0 0.0 4.61120260492288 0.0 15 0.0 0.0 0.0 4.70782691080978 0.0 16 0.0 0.0 0.0 4.860373602581665 0.0 17 0.0 0.0 0.0 5.050928704943573 0.0 18 0.0 0.0 0.0 5.296251832013941 0.0 19 0.0 0.0 0.0 5.432209926137986 0.0 20 0.0 0.0 0.0 5.58296094496861 0.0 21 0.0 0.0 0.0 5.761587648506428 0.0 22 0.0 0.0 0.0 5.961463148515834 0.0 23 0.0 0.0 0.0 6.1828867238203715 0.0 24 0.0 0.0 0.0 6.3502690944164835 0.0 25 0.0 0.0 0.0 6.501105621482405 0.0 26 0.0 0.0 0.0 6.647495720312824 0.0 27 0.0 0.0 0.0 6.814621566203041 0.0 28 0.0 0.0 0.0 6.98307278974038 0.0 29 0.0 0.0 0.0 7.176449663867127 0.0 30 0.0 0.0 0.0 7.426090956820051 0.0 31 0.0 0.0 0.0 7.617843174476134 0.0 32 0.0 0.0 0.0 7.8142128368383155 0.0 33 0.0 0.0 0.0 8.000749052141211 0.0 34 0.0 0.0 0.0 8.20832029332745 0.0 35 0.0 0.0 0.0 8.436413510985243 0.0 36 0.0 0.0 0.0 8.626498318053011 0.0 37 0.0 0.0 0.0 8.832402148650937 0.0 38 4.275411764907078E-5 0.0 0.0 9.0848652133687 0.0 39 4.275411764907078E-5 0.0 0.0 9.479015423975483 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGCGA 20 7.034785E-4 45.000004 22 CGTTTTT 17930 0.0 43.356106 1 ATTAGCG 135 0.0 40.0 1 CGACGGT 350 0.0 39.857143 28 ACGGGAT 1120 0.0 39.57589 5 CTATGCG 40 3.4602635E-7 39.375004 1 CGGTTTT 1790 0.0 38.71508 1 CGGTCTA 360 0.0 38.125 31 TCGTCCC 475 0.0 37.894737 38 TAAGGGA 3200 0.0 37.82813 4 ATAGGGA 3505 0.0 37.74608 4 TCGATAG 185 0.0 37.7027 1 ACGTAGG 300 0.0 37.5 2 TACGGGA 890 0.0 37.41573 4 CGAGGGA 1640 0.0 37.317074 4 ACGGGAC 780 0.0 37.211536 5 AGGGATT 4070 0.0 37.03931 6 TAGGGAT 4090 0.0 37.023228 5 GGGCGAT 3035 0.0 36.919277 7 AAGGGAT 3525 0.0 36.89362 5 >>END_MODULE