##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547906_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2441934 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.428544342312282 31.0 31.0 33.0 30.0 34.0 2 31.83572365182679 31.0 31.0 34.0 30.0 34.0 3 31.928234751635383 33.0 31.0 34.0 30.0 34.0 4 35.69195768599806 37.0 35.0 37.0 33.0 37.0 5 35.57290655685207 37.0 35.0 37.0 33.0 37.0 6 35.6134772684274 37.0 35.0 37.0 33.0 37.0 7 35.97458326064505 37.0 35.0 37.0 35.0 37.0 8 35.998468836586085 37.0 35.0 37.0 35.0 37.0 9 37.73015036442426 39.0 38.0 39.0 35.0 39.0 10 37.2451548649554 39.0 37.0 39.0 34.0 39.0 11 36.945718844162045 39.0 37.0 39.0 33.0 39.0 12 36.211328807412485 38.0 35.0 39.0 32.0 39.0 13 35.88837413296182 38.0 35.0 39.0 31.0 39.0 14 36.667121633918036 39.0 35.0 41.0 31.0 41.0 15 36.97725818961528 39.0 35.0 41.0 31.0 41.0 16 37.15478755773088 39.0 35.0 41.0 32.0 41.0 17 37.118430719257766 39.0 35.0 41.0 32.0 41.0 18 37.06886426905887 38.0 35.0 41.0 32.0 41.0 19 36.99791435804571 38.0 35.0 41.0 32.0 41.0 20 36.83577156466964 38.0 35.0 41.0 31.0 41.0 21 36.708755437288644 38.0 35.0 41.0 31.0 41.0 22 36.666663800086326 38.0 35.0 41.0 31.0 41.0 23 36.61834717891638 38.0 35.0 40.0 31.0 41.0 24 36.633568311019054 38.0 35.0 41.0 31.0 41.0 25 36.58729146651793 38.0 35.0 41.0 31.0 41.0 26 36.48176936805008 38.0 35.0 40.0 31.0 41.0 27 36.39785514268608 38.0 35.0 40.0 31.0 41.0 28 36.34231678661258 38.0 35.0 40.0 31.0 41.0 29 36.34740783329934 38.0 35.0 40.0 31.0 41.0 30 36.255934435574424 38.0 35.0 40.0 30.0 41.0 31 36.079749493639056 38.0 35.0 40.0 30.0 41.0 32 35.98258593393597 38.0 35.0 40.0 30.0 41.0 33 35.91201809713121 38.0 35.0 40.0 30.0 41.0 34 35.76901791776518 38.0 35.0 40.0 30.0 41.0 35 35.73623242888628 38.0 35.0 40.0 29.0 41.0 36 35.60126399812608 38.0 34.0 40.0 29.0 41.0 37 35.4698140899795 38.0 34.0 40.0 28.0 41.0 38 35.33803493460511 38.0 34.0 40.0 27.0 41.0 39 35.27313965078499 37.0 34.0 40.0 27.0 41.0 40 35.10374072354126 37.0 34.0 40.0 26.0 41.0 41 35.02839429730697 37.0 34.0 40.0 26.0 41.0 42 34.963615724257906 37.0 34.0 40.0 26.0 41.0 43 34.91304433289352 37.0 34.0 40.0 26.0 41.0 44 34.750438791548014 37.0 34.0 40.0 26.0 41.0 45 34.628045229723654 36.0 34.0 40.0 25.0 41.0 46 34.61080192994569 36.0 34.0 40.0 25.0 41.0 47 34.50594242104823 36.0 34.0 40.0 24.0 41.0 48 34.407187090232576 36.0 34.0 40.0 24.0 41.0 49 34.26473156113146 36.0 33.0 40.0 24.0 41.0 50 34.1719845827119 36.0 33.0 40.0 24.0 41.0 51 33.83123253945438 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 5.0 12 8.0 13 18.0 14 34.0 15 77.0 16 252.0 17 564.0 18 1181.0 19 2232.0 20 3848.0 21 5966.0 22 8853.0 23 12961.0 24 18612.0 25 26254.0 26 34181.0 27 40487.0 28 45671.0 29 51908.0 30 62162.0 31 75154.0 32 93505.0 33 122530.0 34 215176.0 35 314771.0 36 165525.0 37 213480.0 38 334089.0 39 592339.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.2563042244385 24.127597224167403 29.980621916890467 12.635476634503634 2 29.522992840920352 26.91637038511278 29.967640403057576 13.592996370909288 3 29.181419317639218 25.64156115603452 30.931630420805806 14.245389105520461 4 26.34944269583044 27.904112068548947 30.101304949273818 15.645140286346807 5 23.532863705571074 31.81973796179586 29.72095068908496 14.926447643548105 6 21.84997628928546 40.59532321512375 26.698633132590803 10.856067362999983 7 88.21986998829617 3.662179239897557 6.137512316057682 1.9804384557485992 8 88.36618843916338 2.883534116810692 5.736477726261234 3.0137997177646896 9 83.25384715557423 5.287653147054752 8.047842406879138 3.410657290491881 10 46.46169798200934 30.277026324216788 12.719958852286753 10.541316841487117 11 39.254336931301175 21.08566406790683 24.04790629066961 15.612092710122386 12 36.583052613215585 20.3980123950934 26.618942199093016 16.399992792598 13 24.941951748081642 32.13448848330872 27.271007324522284 15.65255244408735 14 17.738071544931188 35.86083817171144 29.723776318278873 16.6773139650785 15 16.114849950899572 25.24400741379579 42.877858287734234 15.763284347570409 16 21.07907093312104 22.42955788321879 38.77623228146215 17.715138902198014 17 20.989879333348078 22.870724597798304 26.806785113766384 29.33261095508724 18 23.464557191144397 24.691781186551314 31.9960736039549 19.84758801834939 19 26.652890700567667 27.558074870164383 25.937064638110613 19.851969791157337 20 27.354506714759697 27.55402070653834 25.198797346693237 19.892675232008727 21 23.014831686687685 27.163182952528608 30.699027901655 19.122957459128706 22 22.0874929461648 23.177407743206818 29.69277629944134 25.042323011187033 23 19.30375677639117 28.843695202245435 28.192408148623183 23.660139872740213 24 20.988364140881778 27.076202714733487 33.15355779476432 18.781875349620424 25 20.598468263270014 26.03276747037389 30.84215216299867 22.526612103357422 26 18.674296684513177 30.788792817496297 26.604936906566678 23.931973591423848 27 18.95382921897152 29.84675261493554 30.52203704113215 20.67738112496079 28 16.44118964722224 27.819752704209037 34.6590448390497 21.080012809519015 29 18.033411222416333 26.129371227887404 33.40082082480526 22.436396724891008 30 21.450047380477933 26.767431060790344 31.27693049853108 20.505591060200643 31 26.036412122522556 25.36182386583749 26.946223771813653 21.6555402398263 32 26.857728341552228 26.46988002132736 26.668779745889935 20.003611891230474 33 25.77031156452222 25.936245615155855 26.435644861818542 21.857797958503383 34 18.773726071220597 26.572872157887968 30.543741149433195 24.109660621458236 35 19.221936383211013 27.090863225623625 30.22260224887323 23.464598142292132 36 27.65385960472314 24.329322577923893 27.934374966727194 20.082442850625775 37 20.543511823005865 29.52712890684187 28.965852475947347 20.96350679420492 38 20.7139914510384 29.17417096448962 27.23750928567275 22.874328298799227 39 19.679974970658503 27.64325325745905 28.636564296987547 24.0402074748949 40 22.772564696670752 24.868198731005833 28.045311625948944 24.31392494637447 41 18.729867391993395 23.889384397776517 28.976786432393343 28.403961777836745 42 21.561434502324797 25.59618728434102 28.47333302210461 24.369045191229574 43 21.304425099122255 25.486806768733306 29.117003162247627 24.09176496989681 44 20.901875316859506 27.57253062531583 28.573499529471313 22.952094528353346 45 18.86754515068794 29.634134255880788 25.603558490933825 25.89476210249745 46 22.38905719810609 27.21605088425813 28.10849924690839 22.28639267072738 47 20.35333469291144 26.608622509863082 29.255540895044664 23.782501902180815 48 21.466919253345914 25.409859562133946 30.10965898341233 23.01356220110781 49 21.892155971455413 22.888865956246153 31.15387229957894 24.06510577271949 50 19.500322285532697 27.23750928567275 29.751377391854163 23.510791036940393 51 18.633755048252738 29.065322813802503 26.593224878313666 25.707697259631097 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1616.0 1 2477.5 2 3339.0 3 9209.5 4 15080.0 5 11215.0 6 7350.0 7 7268.5 8 7187.0 9 7685.5 10 8184.0 11 8449.5 12 8715.0 13 8758.5 14 8802.0 15 8257.5 16 7713.0 17 7647.5 18 7582.0 19 7627.0 20 7672.0 21 8585.0 22 9498.0 23 9961.0 24 10424.0 25 13484.5 26 18313.5 27 20082.0 28 25485.0 29 30888.0 30 34855.5 31 38823.0 32 44664.5 33 50506.0 34 56244.0 35 61982.0 36 66299.5 37 70617.0 38 82587.5 39 94558.0 40 120244.0 41 145930.0 42 171374.0 43 196818.0 44 207385.0 45 217952.0 46 226535.5 47 235119.0 48 237334.0 49 239549.0 50 225370.0 51 211191.0 52 184259.5 53 157328.0 54 143534.0 55 129740.0 56 122407.5 57 115075.0 58 104202.0 59 93329.0 60 82057.0 61 70785.0 62 59194.5 63 47604.0 64 42527.0 65 37450.0 66 30671.5 67 23893.0 68 18727.0 69 13561.0 70 11068.5 71 8576.0 72 6551.0 73 4526.0 74 3891.5 75 2425.0 76 1593.0 77 1153.5 78 714.0 79 532.0 80 350.0 81 269.5 82 189.0 83 151.5 84 114.0 85 87.5 86 61.0 87 48.5 88 36.0 89 28.0 90 20.0 91 13.0 92 6.0 93 3.5 94 1.0 95 2.0 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2441934.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.809078092565514 #Duplication Level Percentage of deduplicated Percentage of total 1 75.96202844428949 15.047377535226131 2 9.6800687435527 3.8350647536487585 3 3.4747874211960017 2.0649700614460778 4 1.778955069777126 1.4095783960152166 5 1.0562849920739124 1.0462015947998538 6 0.689150424298042 0.8190860743466741 7 0.4938807865428808 0.6848326148331924 8 0.3887749172190592 0.6161018156498429 9 0.3366372835708098 0.6001626815210963 >10 3.159971372120349 14.676924453371127 >50 1.8299504319119246 27.133026394475113 >100 1.1392090933557748 29.581007914067197 >500 0.006096522095297637 0.8314980522968413 >1k 0.0039942730969191416 1.270546680802155 >5k 2.1022489983784954E-4 0.38362097750080143 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9212 0.37724197296077616 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3883 0.15901330666594593 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2285344321345294E-4 0.0 0.0 0.11433560448398687 0.0 2 1.2285344321345294E-4 0.0 0.0 0.4319527063385005 0.0 3 1.2285344321345294E-4 0.0 0.0 0.6376093702778208 0.0 4 1.2285344321345294E-4 0.0 0.0 1.1055171843301252 0.0 5 1.2285344321345294E-4 0.0 0.0 1.8955876776358411 0.0 6 1.2285344321345294E-4 0.0 0.0 2.6972473457513595 0.0 7 1.2285344321345294E-4 0.0 0.0 3.1320256812837695 0.0 8 1.2285344321345294E-4 0.0 0.0 4.176402802041332 0.0 9 1.2285344321345294E-4 0.0 0.0 4.511792702014059 0.0 10 1.2285344321345294E-4 0.0 0.0 5.1476821240868915 0.0 11 1.2285344321345294E-4 0.0 0.0 5.98349504941575 0.0 12 1.2285344321345294E-4 0.0 0.0 6.635027809924429 0.0 13 1.2285344321345294E-4 0.0 0.0 6.8847888599773786 0.0 14 1.2285344321345294E-4 0.0 0.0 6.988067654572155 0.0 15 1.2285344321345294E-4 0.0 0.0 7.14409152745324 0.0 16 1.2285344321345294E-4 0.0 0.0 7.4964352025894225 0.0 17 1.2285344321345294E-4 0.0 0.0 7.903407708807855 0.0 18 1.2285344321345294E-4 0.0 0.0 8.459729050826107 0.0 19 1.2285344321345294E-4 0.0 0.0 8.741391044966818 0.0 20 1.2285344321345294E-4 0.0 0.0 9.042095322805613 0.0 21 1.2285344321345294E-4 0.0 0.0 9.416347861981528 0.0 22 1.2285344321345294E-4 0.0 0.0 9.804400937945088 0.0 23 1.2285344321345294E-4 0.0 0.0 10.208056401196757 0.0 24 1.2285344321345294E-4 0.0 0.0 10.501798983920123 0.0 25 1.2285344321345294E-4 0.0 0.0 10.73714522996936 0.0 26 1.2285344321345294E-4 0.0 0.0 10.976095177019527 0.0 27 1.2285344321345294E-4 0.0 0.0 11.258658096410468 0.0 28 1.2285344321345294E-4 0.0 0.0 11.51493037895373 0.0 29 1.2285344321345294E-4 0.0 0.0 11.826200052908883 0.0 30 1.2285344321345294E-4 0.0 0.0 12.185464472012757 0.0 31 1.2285344321345294E-4 0.0 0.0 12.48227839081646 0.0 32 1.2285344321345294E-4 0.0 0.0 12.754275914091044 0.0 33 1.2285344321345294E-4 0.0 0.0 13.039336853493992 0.0 34 1.2285344321345294E-4 0.0 0.0 13.350729380892359 0.0 35 1.2285344321345294E-4 0.0 0.0 13.713720354440374 0.0 36 1.2285344321345294E-4 0.0 0.0 14.000050779423194 0.0 37 1.2285344321345294E-4 0.0 0.0 14.301041715296154 0.0 38 1.2285344321345294E-4 0.0 0.0 14.706867589377927 0.0 39 1.2285344321345294E-4 0.0 0.0 15.460450610049248 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGCGAT 20 7.0348475E-4 45.0 32 ACCGTAG 40 6.8212103E-9 45.0 1 GACGATT 20 7.0348475E-4 45.0 35 CTAGACG 50 2.1827873E-11 44.999996 1 CGGTCTA 520 0.0 43.701927 31 TAGCCGT 80 0.0 42.1875 44 ACGTGCG 65 0.0 41.538464 1 CGTTTTT 4895 0.0 41.138916 1 CATACGA 255 0.0 40.588234 18 AATCGTC 45 1.9297659E-8 40.0 25 TACGGGA 940 0.0 39.973404 4 CGACGGT 580 0.0 39.956894 28 TCGTTAG 40 3.4603545E-7 39.375 1 TCTCACG 630 0.0 38.571426 23 CTATGCG 170 0.0 38.382355 1 CTCACGA 645 0.0 38.372093 24 TACGCGG 200 0.0 38.249996 2 TATGGGA 2020 0.0 38.09406 4 AAGTACG 95 0.0 37.894737 1 CACGACG 625 0.0 37.8 26 >>END_MODULE