##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547904_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2024527 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51280175566935 31.0 31.0 33.0 30.0 34.0 2 31.9254853108899 31.0 31.0 34.0 30.0 34.0 3 32.000340326407105 33.0 31.0 34.0 30.0 34.0 4 35.76603473305123 37.0 35.0 37.0 35.0 37.0 5 35.673788988736625 37.0 35.0 37.0 33.0 37.0 6 35.71370843658791 37.0 35.0 37.0 33.0 37.0 7 36.02229557817703 37.0 35.0 37.0 35.0 37.0 8 36.04436344884509 37.0 35.0 37.0 35.0 37.0 9 37.77212702028672 39.0 38.0 39.0 35.0 39.0 10 37.32646045224391 39.0 37.0 39.0 34.0 39.0 11 37.06134519322291 39.0 37.0 39.0 33.0 39.0 12 36.37177869201053 38.0 35.0 39.0 33.0 39.0 13 36.10329079335568 38.0 35.0 39.0 32.0 39.0 14 37.03437840048564 39.0 35.0 41.0 32.0 41.0 15 37.27959419657036 39.0 35.0 41.0 32.0 41.0 16 37.4242260043951 39.0 35.0 41.0 33.0 41.0 17 37.36646288244118 39.0 35.0 41.0 33.0 41.0 18 37.28284186874267 39.0 35.0 41.0 32.0 41.0 19 37.219637969757876 39.0 35.0 41.0 32.0 41.0 20 37.08489736121079 39.0 35.0 41.0 32.0 41.0 21 36.94572016080793 39.0 35.0 41.0 32.0 41.0 22 36.875633666530504 38.0 35.0 41.0 32.0 41.0 23 36.81392443765877 38.0 35.0 41.0 32.0 41.0 24 36.828972397009274 38.0 35.0 41.0 32.0 41.0 25 36.79891401794098 38.0 35.0 41.0 32.0 41.0 26 36.70446924145739 38.0 35.0 41.0 32.0 41.0 27 36.60374843111502 38.0 35.0 41.0 31.0 41.0 28 36.56112810547847 38.0 35.0 41.0 31.0 41.0 29 36.56867900502191 38.0 35.0 41.0 31.0 41.0 30 36.488082401469576 38.0 35.0 40.0 31.0 41.0 31 36.312079315316616 38.0 35.0 40.0 31.0 41.0 32 36.186547277462836 38.0 35.0 40.0 30.0 41.0 33 36.09011191256032 38.0 35.0 40.0 30.0 41.0 34 35.934232045312314 38.0 35.0 40.0 30.0 41.0 35 35.87761783369646 38.0 35.0 40.0 30.0 41.0 36 35.75381014923486 38.0 35.0 40.0 29.0 41.0 37 35.64304649925637 38.0 35.0 40.0 29.0 41.0 38 35.51657745241234 38.0 34.0 40.0 29.0 41.0 39 35.45378105601951 38.0 35.0 40.0 28.0 41.0 40 35.28367564374296 38.0 34.0 40.0 27.0 41.0 41 35.22399256715272 38.0 34.0 40.0 27.0 41.0 42 35.17128988647719 37.0 34.0 40.0 27.0 41.0 43 35.09466260514184 37.0 34.0 40.0 27.0 41.0 44 34.9284050052185 37.0 34.0 40.0 26.0 41.0 45 34.80508089049936 37.0 34.0 40.0 26.0 41.0 46 34.79099463726589 37.0 34.0 40.0 26.0 41.0 47 34.70856995238888 37.0 34.0 40.0 26.0 41.0 48 34.61980798477867 36.0 34.0 40.0 25.0 41.0 49 34.496176637802314 36.0 34.0 40.0 24.0 41.0 50 34.410161978575736 36.0 34.0 40.0 24.0 41.0 51 34.10104977607115 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 8.0 13 16.0 14 33.0 15 77.0 16 182.0 17 420.0 18 887.0 19 1727.0 20 2866.0 21 4594.0 22 6866.0 23 10127.0 24 14771.0 25 20794.0 26 27032.0 27 31322.0 28 34969.0 29 39608.0 30 47065.0 31 57563.0 32 71662.0 33 94792.0 34 169106.0 35 261233.0 36 135967.0 37 177566.0 38 286281.0 39 526907.0 40 81.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.08924652523775 23.979428281272614 29.22840742553693 12.702917767952712 2 30.787833405037325 25.872512443647334 29.998068684685357 13.341585466629983 3 29.974161865956837 25.17906651775946 30.749503464265977 14.097268152017731 4 26.70776927153849 28.423626852099282 29.374071079318774 15.494532797043458 5 23.664885674530396 32.36390524799126 28.867928162973378 15.103280914504968 6 22.917204858221204 40.442434208089104 26.471368373946113 10.168992559743586 7 88.16143227529196 4.232593588527098 5.873421297913044 1.7325528382679016 8 88.83576262504774 3.2558716184076575 5.707999942702665 2.2003658138419495 9 83.87746866305068 6.028074705844872 7.116328900528371 2.9781277305760803 10 45.08944558407964 30.857627485333612 13.337880897612134 10.715046032974616 11 39.154330863456 22.485844841782797 23.080601049035156 15.27922324572604 12 35.79166886882714 22.493994893622066 26.05265328642196 15.66168295112883 13 24.664625366814075 33.124082810454 26.566995648860203 15.644296173871725 14 17.975606153931263 36.744977962753765 29.231914417540494 16.047501465774474 15 16.567869927148415 26.20602244376094 42.00018078296807 15.225926846122576 16 20.629114850036576 23.57567965258058 38.797654958417446 16.9975505389654 17 21.27687109137097 22.743090114382273 27.243054797490966 28.736983996755782 18 23.680099104630365 25.549029477008705 31.56174256999289 19.20912884836804 19 27.159627903208992 27.0317955749664 26.205824866746653 19.602751655077952 20 28.61142380417747 26.83846646648822 25.510995901758783 19.039113827575527 21 23.412777404302336 27.40768584464421 30.270971935666946 18.90856481538651 22 23.297392427959714 24.19829421884717 28.64466613683097 23.85964721636214 23 20.31309041568722 28.93391888574467 27.88379705481824 22.869193643749874 24 20.51501412428681 27.012679998834294 33.83817553433469 18.634130342544207 25 20.409903152687022 26.647804647702895 31.4876511896359 21.454641009974182 26 18.858034493983038 32.13451833440601 27.10218238630554 21.905264785305405 27 19.066922792336186 31.535711798360804 30.2686504057491 19.128715003553918 28 17.12992713853656 28.34612726824587 35.26186610502107 19.262079488196502 29 18.327095662344835 26.898529878830956 34.085788927487755 20.688585531336457 30 20.387725132833495 28.318219514978065 31.763765067099627 19.530290285088814 31 26.256157611135833 27.262269162130217 26.85738446560604 19.624188761127908 32 26.97681977074151 28.045217475489338 26.872005164663154 18.105957589105998 33 25.33791843724485 27.885575247946804 26.974300663809377 19.802205650998975 34 19.820827284595367 28.421749870463568 29.784043383960796 21.97337946098027 35 20.1970139197946 28.96513605400175 29.17674103630132 21.661108989902335 36 27.728600310097125 25.894690463500858 28.09036382325353 18.286345403148488 37 21.399319445974292 30.139336249899358 28.72829060812723 19.733053695999114 38 21.196012698274707 31.41459708860391 25.191662052420146 22.197728160701242 39 20.103411809276935 30.05531662457453 27.617315056800923 22.223956509347616 40 23.433226625280867 26.776871832284776 26.946689276063 22.843212266371353 41 19.576819671953004 25.44406668816963 28.584108781952526 26.395004857924835 42 23.00596633188888 26.589766399756588 26.725649991331306 23.678617277023225 43 22.4689520070614 27.0112969597343 27.14678539728045 23.372965635923848 44 20.879642504150354 29.570462631518375 27.898170782607494 21.65172408172378 45 19.35350825155703 32.256077592445045 25.491781537119536 22.898632618878384 46 22.623605414993232 29.23265533134406 27.35947705315859 20.784262200504116 47 21.926603102848222 28.561288636802573 27.50756102536543 22.004547234983775 48 22.717849650807324 26.886823440734553 28.973483682855306 21.421843225602817 49 21.601786491363168 25.07514100824538 30.429280518363054 22.893791982028393 50 20.093582352816238 30.348125759745365 28.05060144912861 21.507690438309787 51 19.517595961920982 31.367771336218286 25.602819819147882 23.511812882712853 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1573.0 1 2398.0 2 3223.0 3 8258.5 4 13294.0 5 10125.0 6 6956.0 7 6720.5 8 6485.0 9 6972.5 10 7460.0 11 7743.5 12 8027.0 13 7940.5 14 7854.0 15 7435.0 16 7016.0 17 7131.5 18 7247.0 19 7559.5 20 7872.0 21 8769.0 22 9666.0 23 10096.0 24 10526.0 25 13037.0 26 19114.0 27 22680.0 28 25666.5 29 28653.0 30 33256.5 31 37860.0 32 42217.0 33 46574.0 34 53012.0 35 59450.0 36 63509.0 37 67568.0 38 79683.0 39 91798.0 40 109683.0 41 127568.0 42 150104.5 43 172641.0 44 182912.5 45 193184.0 46 184542.0 47 175900.0 48 172300.0 49 168700.0 50 158277.0 51 147854.0 52 136627.0 53 125400.0 54 116095.5 55 106791.0 56 95739.5 57 84688.0 58 77261.5 59 69835.0 60 63106.5 61 56378.0 62 50254.5 63 44131.0 64 37515.0 65 30899.0 66 26483.5 67 22068.0 68 17457.5 69 12847.0 70 10041.5 71 7236.0 72 5891.0 73 4546.0 74 3626.5 75 2387.5 76 2068.0 77 1440.0 78 812.0 79 652.5 80 493.0 81 377.5 82 262.0 83 178.5 84 95.0 85 68.0 86 41.0 87 37.0 88 33.0 89 22.0 90 11.0 91 8.5 92 6.0 93 4.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2024527.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.163212796831207 #Duplication Level Percentage of deduplicated Percentage of total 1 78.52391669672365 15.047705252999622 2 8.19710114557485 3.1416558713959937 3 2.76858729003289 1.591650821565075 4 1.3520706537289047 1.036400706150307 5 0.7764374501409985 0.7439518040240487 6 0.5293772251160717 0.6086741048817178 7 0.41809554043547675 0.5608437667539831 8 0.3241513279951066 0.49694247013965254 9 0.2703719570090265 0.46630758118137056 >10 3.379153650012015 16.34281059510952 >50 2.5130830431218842 35.749712968311066 >100 0.9411238794058833 22.77540285872534 >500 0.0049629069345036615 0.6343019065936524 >1k 0.0013060281406588584 0.42832397527792637 >5k 2.6120562813177167E-4 0.3753153168907201 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7498 0.3703581132778175 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3987 0.1969348889888848 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.939425357132802E-5 0.0 0.0 0.04909788804990005 0.0 2 4.939425357132802E-5 0.0 0.0 0.18285752672105632 0.0 3 4.939425357132802E-5 0.0 0.0 0.2776450993244348 0.0 4 4.939425357132802E-5 0.0 0.0 0.45635350874549957 0.0 5 4.939425357132802E-5 0.0 0.0 0.796284761823379 0.0 6 4.939425357132802E-5 0.0 0.0 1.1515776277619414 0.0 7 4.939425357132802E-5 0.0 0.0 1.3324593843401447 0.0 8 4.939425357132802E-5 0.0 0.0 1.7643627375678368 0.0 9 4.939425357132802E-5 0.0 0.0 1.9165464328210984 0.0 10 4.939425357132802E-5 0.0 0.0 2.2351887626097353 0.0 11 4.939425357132802E-5 0.0 0.0 2.6906531747909512 0.0 12 4.939425357132802E-5 0.0 0.0 3.0362647670295333 0.0 13 4.939425357132802E-5 0.0 0.0 3.1749638310578225 0.0 14 4.939425357132802E-5 0.0 0.0 3.2408063710684027 0.0 15 4.939425357132802E-5 0.0 0.0 3.3461149196824738 0.0 16 4.939425357132802E-5 0.0 0.0 3.583898856374847 0.0 17 4.939425357132802E-5 0.0 0.0 3.8580369636957177 0.0 18 4.939425357132802E-5 0.0 0.0 4.20438946973787 0.0 19 4.939425357132802E-5 0.0 0.0 4.382702725130364 0.0 20 4.939425357132802E-5 0.0 0.0 4.578353363526394 0.0 21 4.939425357132802E-5 0.0 0.0 4.817322762304479 0.0 22 4.939425357132802E-5 0.0 0.0 5.067702233657541 0.0 23 4.939425357132802E-5 0.0 0.0 5.32282355335345 0.0 24 4.939425357132802E-5 0.0 0.0 5.519412682567335 0.0 25 4.939425357132802E-5 0.0 0.0 5.683944941213429 0.0 26 4.939425357132802E-5 0.0 0.0 5.858405444827359 0.0 27 4.939425357132802E-5 0.0 0.0 6.051833341812681 0.0 28 4.939425357132802E-5 0.0 0.0 6.231183876530173 0.0 29 4.939425357132802E-5 0.0 0.0 6.452272555515436 0.0 30 4.939425357132802E-5 0.0 0.0 6.687191625500673 0.0 31 4.939425357132802E-5 0.0 0.0 6.906502111357369 0.0 32 4.939425357132802E-5 0.0 0.0 7.098793940510549 0.0 33 4.939425357132802E-5 0.0 0.0 7.292123048988727 0.0 34 4.939425357132802E-5 0.0 0.0 7.528573340834674 0.0 35 4.939425357132802E-5 0.0 0.0 7.787448623802004 0.0 36 4.939425357132802E-5 0.0 0.0 8.006215772869416 0.0 37 4.939425357132802E-5 0.0 0.0 8.234466618622523 0.0 38 4.939425357132802E-5 0.0 0.0 8.48953854406486 0.0 39 4.939425357132802E-5 0.0 0.0 8.913193056946142 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCATA 20 7.034561E-4 45.0 36 TACGACG 20 7.034561E-4 45.0 1 CGAATCG 20 7.034561E-4 45.0 24 CATACGA 20 7.034561E-4 45.0 18 TATCGAT 20 7.034561E-4 45.0 12 CGGGTAC 65 0.0 41.53846 6 TACGGGA 630 0.0 41.428574 4 GTTCACG 60 3.6379788E-12 41.250004 1 TCACGAC 375 0.0 40.8 25 CGGTCTA 370 0.0 40.135136 31 CGTTTTT 4570 0.0 40.125824 1 CACGACG 395 0.0 39.873417 26 CGACGGT 390 0.0 39.807693 28 TCGTTAG 40 3.4599543E-7 39.375 1 CGAAATC 40 3.4599543E-7 39.375 27 AGTACGG 155 0.0 39.19355 2 ACGTTAT 35 6.250648E-6 38.571426 19 CGATATC 35 6.250648E-6 38.571426 38 GGGCGAT 2910 0.0 38.041233 7 ACGGGAT 635 0.0 37.913387 5 >>END_MODULE