##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547903_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2050509 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.458404230364266 31.0 31.0 33.0 30.0 34.0 2 31.875247072799972 31.0 31.0 34.0 30.0 34.0 3 31.97134906503702 33.0 31.0 34.0 30.0 34.0 4 35.72304583886245 37.0 35.0 37.0 35.0 37.0 5 35.59650262447031 37.0 35.0 37.0 33.0 37.0 6 35.648770134634866 37.0 35.0 37.0 33.0 37.0 7 36.00345036281236 37.0 35.0 37.0 35.0 37.0 8 36.03246462219868 37.0 35.0 37.0 35.0 37.0 9 37.784274538663325 39.0 38.0 39.0 35.0 39.0 10 37.267184391777846 39.0 37.0 39.0 34.0 39.0 11 36.979325133418094 39.0 37.0 39.0 33.0 39.0 12 36.34185609524269 38.0 35.0 39.0 32.0 39.0 13 36.09885691796525 38.0 35.0 39.0 32.0 39.0 14 37.01197897692719 39.0 35.0 41.0 31.0 41.0 15 37.260012026282254 39.0 35.0 41.0 32.0 41.0 16 37.394813677969715 39.0 35.0 41.0 33.0 41.0 17 37.3451567391316 39.0 35.0 41.0 32.0 41.0 18 37.27043675497157 39.0 35.0 41.0 32.0 41.0 19 37.20918952318668 39.0 35.0 41.0 32.0 41.0 20 37.06346424229301 39.0 35.0 41.0 32.0 41.0 21 36.95929693554137 39.0 35.0 41.0 32.0 41.0 22 36.88309097887402 38.0 35.0 41.0 32.0 41.0 23 36.79660367255155 38.0 35.0 41.0 31.0 41.0 24 36.830715690591944 38.0 35.0 41.0 32.0 41.0 25 36.79798235462512 38.0 35.0 41.0 32.0 41.0 26 36.685606354324705 38.0 35.0 41.0 31.0 41.0 27 36.61635428081515 38.0 35.0 41.0 31.0 41.0 28 36.55780979259296 38.0 35.0 41.0 31.0 41.0 29 36.56869684551494 38.0 35.0 41.0 31.0 41.0 30 36.461871174425475 38.0 35.0 40.0 31.0 41.0 31 36.322839841229666 38.0 35.0 40.0 30.0 41.0 32 36.20685839467176 38.0 35.0 40.0 30.0 41.0 33 36.10850135259099 38.0 35.0 40.0 30.0 41.0 34 35.99850232308173 38.0 35.0 40.0 30.0 41.0 35 35.92295912868463 38.0 35.0 40.0 30.0 41.0 36 35.781797105011485 38.0 35.0 40.0 29.0 41.0 37 35.66522165959769 38.0 35.0 40.0 29.0 41.0 38 35.57771655720604 38.0 34.0 40.0 29.0 41.0 39 35.49762180999937 38.0 34.0 40.0 28.0 41.0 40 35.359767257788185 38.0 34.0 40.0 27.0 41.0 41 35.27267571125023 38.0 34.0 40.0 27.0 41.0 42 35.18525205205147 37.0 34.0 40.0 27.0 41.0 43 35.12071197931831 37.0 34.0 40.0 27.0 41.0 44 34.9426620414736 37.0 34.0 40.0 26.0 41.0 45 34.80646707719888 37.0 34.0 40.0 26.0 41.0 46 34.78940594749889 37.0 34.0 40.0 26.0 41.0 47 34.679793163551096 37.0 34.0 40.0 25.0 41.0 48 34.59337023148886 36.0 34.0 40.0 25.0 41.0 49 34.441051465758015 36.0 34.0 40.0 24.0 41.0 50 34.36819687209371 36.0 34.0 40.0 24.0 41.0 51 34.04347554680326 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 2.0 12 0.0 13 13.0 14 21.0 15 64.0 16 141.0 17 331.0 18 804.0 19 1516.0 20 2673.0 21 4269.0 22 6665.0 23 9748.0 24 14459.0 25 20569.0 26 26693.0 27 31760.0 28 35806.0 29 41816.0 30 49610.0 31 60380.0 32 75187.0 33 98327.0 34 172820.0 35 255912.0 36 141573.0 37 181202.0 38 290117.0 39 527941.0 40 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.647844998485745 25.18842882425778 29.697504375742806 12.466221801513672 2 29.475169336003894 26.9148294399098 30.691842854627804 12.91815836945851 3 29.355345428866684 25.770918342713934 30.974845757809405 13.898890470609981 4 26.154189033064473 28.012556882218025 30.85721642772599 14.976037656991508 5 23.700505581784814 32.815023001605944 28.668394042649897 14.816077373959343 6 21.79136985012014 40.90311234917769 26.258260753793326 11.047257046908841 7 88.72270250947447 3.5985699160549895 5.826065625656849 1.8526619488136848 8 89.1936099768399 2.8443181668551567 5.35198821365817 2.610083642646777 9 84.53101156834718 5.282298200105437 7.329155833990487 2.857534397556899 10 44.75820393863182 32.20693008418885 13.47158193404662 9.563284043132706 11 36.65894663227521 22.273786654923242 25.13405208170264 15.933214631098913 12 35.13498355774103 22.054524023059642 26.58315569451292 16.227336724686406 13 24.704402662948567 32.830189967466616 26.91243978934011 15.552967580244708 14 17.173540813524838 36.45114456947031 28.775733244769956 17.599581372234894 15 15.502833686660239 27.470788960204516 40.86560946574729 16.160767887387962 16 19.51359394179689 24.3080620470332 38.88351623913867 17.294827772031237 17 19.700328064885355 24.14029882336532 27.48580962092827 28.673563490821056 18 22.336551558661778 26.87396153833024 30.949973884533062 19.839513018474925 19 25.67616138236896 28.396705403390087 26.271038069084312 19.65609514515664 20 26.746432227315264 27.783199195906967 25.718248493422852 19.752120083354914 21 23.098264869844513 28.225138246162295 29.146763071998222 19.529833811994973 22 21.997562556418917 25.434367759419736 28.865857209112466 23.702212475048878 23 19.43541823030282 29.660586712860077 28.17793045531622 22.72606460152089 24 19.77538260012514 27.992366773323113 33.434722793218654 18.79752783333309 25 20.006544716458205 27.9721766644282 30.535003747849927 21.48627487126367 26 18.258393403784133 32.50373443861987 27.145064957042376 22.09280720055362 27 19.051416014267677 31.74577629261808 29.59099423606529 19.611813457048957 28 16.790513965069163 29.706282683957987 33.446378435793264 20.056824915179597 29 17.664443316269278 28.018311550936865 32.90656124893868 21.41068388385518 30 20.93343652722324 29.217623526646307 30.298330804692885 19.550609141437565 31 25.57525960627337 28.924086653606494 25.070799494174373 20.429854245945762 32 26.382522583417096 29.133888219949288 25.715810074474195 18.767779122159425 33 24.651830350415434 28.72808653851312 26.531168602527472 20.088914508543976 34 20.51778363323448 28.238013098211223 29.55407657318256 21.690126695371735 35 20.766160987345092 28.060252356853837 28.99918995722525 22.17439669857582 36 26.32341530810155 26.817634060616168 28.060740040643566 18.798210590638714 37 20.888569618567878 30.695256641155925 29.055810045213164 19.360363695063032 38 20.650970076210346 30.795426891566922 26.455089931329244 22.098513100893484 39 20.441363583383442 28.56471246895283 28.821721826141705 22.172202121522023 40 23.77882759841581 26.41427079812866 27.849134044278763 21.95776755917677 41 19.539685024547563 25.271627678786096 29.144617263323397 26.04407003334294 42 22.17717649617729 27.56140060833676 27.139651666976345 23.121771228509605 43 21.50446547662068 27.4069023837496 27.950035820374357 23.138596319255367 44 20.603859822122214 29.827715947601302 27.487565282571303 22.080858947705178 45 19.46136300791657 31.39649716241187 25.04422072763397 24.09791910203759 46 22.887341630785333 29.418402942879062 26.85786797326908 20.836387453066532 47 21.302710692808468 27.604609392107033 29.06288146016428 22.02979845492022 48 21.90777997072922 26.334632035265393 29.653661603045876 22.103926390959515 49 21.40551443568402 25.087575816541165 30.725541804498295 22.781367943276525 50 19.444440380412864 28.754714073432496 29.201383656448225 22.59946188970641 51 19.148660161940278 30.421032046189506 26.447433295830454 23.982874496039763 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1415.0 1 2079.5 2 2744.0 3 8369.0 4 13994.0 5 10151.5 6 6309.0 7 6317.0 8 6325.0 9 7091.0 10 7857.0 11 8267.0 12 8677.0 13 8794.0 14 8911.0 15 8485.5 16 8060.0 17 7879.0 18 7698.0 19 7464.5 20 7231.0 21 8006.0 22 8781.0 23 9694.5 24 10608.0 25 11243.5 26 16673.0 27 21467.0 28 25698.0 29 29929.0 30 35208.0 31 40487.0 32 44621.5 33 48756.0 34 54862.0 35 60968.0 36 67110.0 37 73252.0 38 83286.0 39 93320.0 40 112559.0 41 131798.0 42 147593.5 43 163389.0 44 174970.0 45 186551.0 46 189839.0 47 193127.0 48 195732.0 49 198337.0 50 180929.0 51 163521.0 52 147335.0 53 131149.0 54 117933.0 55 104717.0 56 94212.5 57 83708.0 58 76151.0 59 68594.0 60 60014.0 61 51434.0 62 44958.0 63 38482.0 64 32057.5 65 25633.0 66 19714.0 67 13795.0 68 10601.5 69 7408.0 70 5985.0 71 4562.0 72 3561.0 73 2560.0 74 2021.0 75 1127.0 76 772.0 77 582.0 78 392.0 79 308.5 80 225.0 81 147.5 82 70.0 83 59.5 84 49.0 85 43.5 86 38.0 87 28.5 88 19.0 89 14.5 90 10.0 91 12.0 92 14.0 93 8.0 94 2.0 95 1.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2050509.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.359760733727086 #Duplication Level Percentage of deduplicated Percentage of total 1 76.7945060148467 16.403122741418912 2 9.212768672436288 3.9356506907683135 3 3.352766213347512 2.1484285233968112 4 1.6105388073300857 1.3760289430781125 5 0.9842272023276982 1.0511428774672618 6 0.6212328548306841 0.7961631083468176 7 0.48196271251022577 0.7206225755257561 8 0.3754130290407826 0.6414985981307884 9 0.30396946838133043 0.5843443603485096 >10 3.401533095066659 18.141783411138398 >50 2.1807422679707775 34.22117261209969 >100 0.6738580321953062 18.188549543215878 >500 0.004398248735807466 0.6233533846853948 >1k 0.001851894204550512 0.7148266742600741 >5k 2.31486775568814E-4 0.453311956119275 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9168 0.44710849842648825 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4800 0.2340882190714598 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.87683789732208E-5 0.0 0.0 0.09919488283153109 0.0 2 4.87683789732208E-5 0.0 0.0 0.36898155531138854 0.0 3 4.87683789732208E-5 0.0 0.0 0.5516679029450736 0.0 4 4.87683789732208E-5 0.0 0.0 0.9128465176207469 0.0 5 4.87683789732208E-5 0.0 0.0 1.6149161013192335 0.0 6 4.87683789732208E-5 0.0 0.0 2.343515683179152 0.0 7 4.87683789732208E-5 0.0 0.0 2.759607492578672 0.0 8 4.87683789732208E-5 0.0 0.0 3.677525921612634 0.0 9 4.87683789732208E-5 0.0 0.0 4.000713969068168 0.0 10 4.87683789732208E-5 0.0 0.0 4.60383251182999 0.0 11 4.87683789732208E-5 0.0 0.0 5.410607805183981 0.0 12 4.87683789732208E-5 0.0 0.0 6.006069712447007 0.0 13 4.87683789732208E-5 0.0 0.0 6.243474181288646 0.0 14 4.87683789732208E-5 0.0 0.0 6.33984049813973 0.0 15 4.87683789732208E-5 0.0 0.0 6.4994106341401086 0.0 16 4.87683789732208E-5 0.0 0.0 6.848055775419664 0.0 17 4.87683789732208E-5 0.0 0.0 7.268731812442667 0.0 18 4.87683789732208E-5 0.0 0.0 7.778068762438985 0.0 19 4.87683789732208E-5 0.0 0.0 8.03766284371344 0.0 20 4.87683789732208E-5 0.0 0.0 8.307303211056377 0.0 21 4.87683789732208E-5 0.0 0.0 8.657313866947183 0.0 22 4.87683789732208E-5 0.0 0.0 9.04112100946643 0.0 23 4.87683789732208E-5 0.0 0.0 9.426196129838981 0.0 24 4.87683789732208E-5 0.0 0.0 9.70554140459759 0.0 25 4.87683789732208E-5 0.0 0.0 9.93992223394289 0.0 26 4.87683789732208E-5 0.0 0.0 10.168938541601134 0.0 27 4.87683789732208E-5 0.0 0.0 10.428191244222775 0.0 28 4.87683789732208E-5 0.0 0.0 10.676373524817496 0.0 29 4.87683789732208E-5 0.0 0.0 10.968154736214277 0.0 30 4.87683789732208E-5 0.0 0.0 11.304705319508473 0.0 31 4.87683789732208E-5 0.0 0.0 11.597559435242664 0.0 32 4.87683789732208E-5 0.0 0.0 11.872125408861898 0.0 33 4.87683789732208E-5 0.0 0.0 12.136254949380861 0.0 34 4.87683789732208E-5 0.0 0.0 12.43574156465541 0.0 35 4.87683789732208E-5 0.0 0.0 12.775754702856705 0.0 36 4.87683789732208E-5 0.0 0.0 13.062073855808485 0.0 37 4.87683789732208E-5 0.0 0.0 13.353708762068345 0.0 38 4.87683789732208E-5 0.0 0.0 13.657974678482269 0.0 39 4.87683789732208E-5 0.0 0.0 14.192524880407742 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCCC 20 7.0345815E-4 45.0 27 CTACGCG 50 2.1827873E-11 45.0 1 CGCGTAG 20 7.0345815E-4 45.0 2 TCGCGAT 20 7.0345815E-4 45.0 1 TACGTAA 20 7.0345815E-4 45.0 24 TTTCGCG 65 0.0 44.999996 1 CTAACGG 30 2.1663382E-6 44.999996 2 CGACGGT 415 0.0 42.831326 28 CGGTCTA 400 0.0 42.75 31 CGTTTTT 4255 0.0 42.09166 1 CGCATCG 135 0.0 41.666664 21 GACGGTC 435 0.0 40.86207 29 ACGGTCT 445 0.0 39.4382 30 TACGACG 80 0.0 39.375 1 TTAACGG 160 0.0 39.375 2 TAGTACG 80 0.0 39.375 1 GGGCGAT 2590 0.0 38.91892 7 AGGGATT 3500 0.0 38.82857 6 TTACCGG 145 0.0 38.793106 2 CTCACGA 460 0.0 38.641304 24 >>END_MODULE