##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547902_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1973056 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4642711610821 31.0 31.0 33.0 30.0 34.0 2 31.867094497064453 31.0 31.0 34.0 30.0 34.0 3 31.904328615102663 33.0 31.0 34.0 30.0 34.0 4 35.70822014174965 37.0 35.0 37.0 33.0 37.0 5 35.63649688604885 37.0 35.0 37.0 33.0 37.0 6 35.682506223847675 37.0 35.0 37.0 33.0 37.0 7 36.0217576186383 37.0 35.0 37.0 35.0 37.0 8 36.05026466557462 37.0 35.0 37.0 35.0 37.0 9 37.80354434947614 39.0 38.0 39.0 35.0 39.0 10 37.20959060462552 39.0 37.0 39.0 34.0 39.0 11 37.02056049093386 39.0 37.0 39.0 33.0 39.0 12 36.50670280012326 39.0 35.0 39.0 33.0 39.0 13 36.30741246067015 39.0 35.0 39.0 32.0 39.0 14 37.21048363553797 40.0 35.0 41.0 32.0 41.0 15 37.4235323275163 40.0 35.0 41.0 32.0 41.0 16 37.552635100068116 40.0 35.0 41.0 33.0 41.0 17 37.497633620130394 39.0 35.0 41.0 33.0 41.0 18 37.40463372555062 39.0 35.0 41.0 32.0 41.0 19 37.31875172321516 39.0 35.0 41.0 32.0 41.0 20 37.169547645885366 39.0 35.0 41.0 32.0 41.0 21 37.06906240877096 39.0 35.0 41.0 32.0 41.0 22 37.00796226767005 39.0 35.0 41.0 32.0 41.0 23 36.92225157319407 39.0 35.0 41.0 32.0 41.0 24 36.967631430633496 39.0 35.0 41.0 32.0 41.0 25 36.931739393103896 39.0 35.0 41.0 32.0 41.0 26 36.84248445051737 39.0 35.0 41.0 32.0 41.0 27 36.762131434688115 38.0 35.0 41.0 31.0 41.0 28 36.701379991242014 38.0 35.0 41.0 31.0 41.0 29 36.68173533848 38.0 35.0 41.0 31.0 41.0 30 36.59248850514126 38.0 35.0 41.0 31.0 41.0 31 36.41385191297155 38.0 35.0 41.0 30.0 41.0 32 36.27179309659736 38.0 35.0 41.0 30.0 41.0 33 36.166480829738234 38.0 35.0 41.0 30.0 41.0 34 35.971345466119566 38.0 35.0 41.0 30.0 41.0 35 35.87843477326543 38.0 35.0 41.0 29.0 41.0 36 35.750533689869926 38.0 35.0 40.0 29.0 41.0 37 35.61585580946512 38.0 35.0 40.0 28.0 41.0 38 35.471913113464595 38.0 34.0 40.0 27.0 41.0 39 35.406467429206266 38.0 35.0 40.0 27.0 41.0 40 35.24909429838788 38.0 34.0 40.0 26.0 41.0 41 35.171880575107856 38.0 34.0 40.0 25.0 41.0 42 35.114637394985245 38.0 34.0 40.0 25.0 41.0 43 35.063653033669596 38.0 34.0 40.0 25.0 41.0 44 34.86250719695741 38.0 34.0 40.0 24.0 41.0 45 34.74433670407733 37.0 34.0 40.0 24.0 41.0 46 34.7317922045801 37.0 34.0 40.0 24.0 41.0 47 34.62901661179409 37.0 34.0 40.0 24.0 41.0 48 34.532604244380295 37.0 34.0 40.0 23.0 41.0 49 34.40367683431185 37.0 34.0 40.0 24.0 41.0 50 34.31538841269584 37.0 34.0 40.0 24.0 41.0 51 34.009901898374906 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 5.0 12 6.0 13 10.0 14 25.0 15 62.0 16 147.0 17 384.0 18 832.0 19 1586.0 20 2686.0 21 4499.0 22 6979.0 23 10255.0 24 15173.0 25 21772.0 26 28772.0 27 33165.0 28 36255.0 29 40066.0 30 46852.0 31 56306.0 32 69166.0 33 90497.0 34 152429.0 35 215985.0 36 135070.0 37 178371.0 38 291818.0 39 533820.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.051114616108215 23.960850579000294 28.528536442959552 14.459498361931947 2 30.96120941321483 25.9028633753933 30.10867405689448 13.027253154497389 3 28.898571556002466 25.24388562716922 32.49188061565409 13.365662201174219 4 25.31210467417042 27.584417269454086 31.796563300788215 15.306914755587272 5 23.56750137857212 31.60391798306789 29.883997210418762 14.944583427941224 6 21.288904116254177 40.50422289078465 27.222339355801356 10.984533637159817 7 88.50331668234455 3.3134893282299136 6.613953177203283 1.5692408122222585 8 88.99848762528788 2.516198222452885 6.323084595672905 2.162229556586331 9 84.2721139187129 4.697737925330046 8.316033604722826 2.7141145512342275 10 39.41053877842292 30.200460605274255 20.571337052774986 9.817663563527846 11 34.77093402316001 22.412795176619415 26.245022949171236 16.571247851049336 12 32.58316033604723 21.938657595121477 28.20806910700963 17.270112961821663 13 24.58972274481819 29.29805337506893 29.18563892763307 16.92658495247981 14 18.632365224301793 32.69212835317396 30.75087579876091 17.924630623763342 15 17.66741542054559 26.18263242401635 39.59188183204126 16.5580703233968 16 22.12897150410328 23.615193892114565 36.50225842550845 17.753576178273704 17 21.742515164293362 23.455441710726912 28.770698854974214 26.031344270005512 18 23.948331927730386 24.799650896882806 32.10000121638717 19.152015958999645 19 25.280782704596323 26.919560316585034 28.356772438288623 19.44288454053002 20 26.479532258587696 27.42355006649583 27.57838601641312 18.518531658503356 21 23.739164017645724 26.001745515585974 31.463323899575073 18.79576656719323 22 22.332665671932272 23.267661941678288 31.657084238866002 22.742588147523435 23 19.67090645171754 27.915629358720683 30.441558678516984 21.971905511044795 24 20.874774968373934 27.28331076259366 32.798207450776864 19.043706818255536 25 20.51345729670116 27.168666272016605 30.74813892763307 21.56973750364916 26 19.288707466995362 30.748392341626392 27.757651075286255 22.20524911609199 27 19.230371565733563 29.440725453306953 31.57011255635927 19.758790424600214 28 17.4685868013883 27.65876893509358 34.54286142917383 20.329782834344286 29 19.21891725323559 26.578160984787054 33.584196292451914 20.618725469525447 30 21.487732735411463 26.61602103538876 32.76642933601479 19.12981689318499 31 25.00704490901424 25.832921113237532 29.19587685296312 19.964157124785107 32 26.052783093840215 26.763964124687796 28.346179733367933 18.83707304810406 33 25.363446349216645 26.162359304550908 28.632943008206556 19.841251338025884 34 20.608690275390053 26.89396550325992 31.6043234454572 20.89302077589283 35 20.68344740341886 27.533937201985143 30.53881896915242 21.243796425443577 36 25.96814282007201 25.58518359336988 29.570118638295114 18.876554948263 37 20.567586525673878 28.490524343961855 31.487753008530927 19.454136121833336 38 21.48246172435045 28.5673087839372 28.1937765577865 21.75645293392585 39 20.49926611307535 26.85276038794641 30.063617048882545 22.58435645009569 40 22.902391011709756 25.56491047390444 29.141088747607775 22.391609766778036 41 19.221958221155404 25.275106231146 30.18150523857407 25.321430309124526 42 21.832375766323917 25.95278593207694 29.364245110123584 22.85059319147556 43 22.16039483927471 25.659433893412047 29.738537578254242 22.441633689059003 44 21.446882399688604 27.933216289856954 29.341944678711602 21.27795663174284 45 19.837450128126115 29.528153281001657 27.16233092218366 23.472065668688572 46 22.362011012358494 28.040055629439813 28.95062279022998 20.647310567971715 47 21.06174381264394 27.085901261798956 30.39275114340394 21.459603782153167 48 21.919195400434653 26.091707483213856 29.91623147036881 22.072865645982677 49 21.959792322164194 24.05699584806513 30.96795022543709 23.01526160433358 50 19.714138878977586 27.273376934055598 30.172534383210614 22.839949803756205 51 19.56579032728924 29.156699049596156 28.039295387459862 23.238215235654742 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1386.0 1 2277.5 2 3169.0 3 12014.5 4 20860.0 5 15124.0 6 9388.0 7 8662.5 8 7937.0 9 8264.0 10 8591.0 11 8934.0 12 9277.0 13 9119.0 14 8961.0 15 8829.5 16 8698.0 17 8250.0 18 7802.0 19 8001.0 20 8200.0 21 8407.5 22 8615.0 23 10344.5 24 12074.0 25 13638.5 26 19195.0 27 23187.0 28 26286.5 29 29386.0 30 33972.5 31 38559.0 32 42713.5 33 46868.0 34 51500.5 35 56133.0 36 60736.0 37 65339.0 38 73365.5 39 81392.0 40 98540.5 41 115689.0 42 130838.5 43 145988.0 44 152991.0 45 159994.0 46 165686.5 47 171379.0 48 173914.5 49 176450.0 50 173617.0 51 170784.0 52 153341.0 53 135898.0 54 122032.5 55 108167.0 56 99592.0 57 91017.0 58 82282.0 59 73547.0 60 63806.0 61 54065.0 62 46356.5 63 38648.0 64 31899.5 65 25151.0 66 20188.0 67 15225.0 68 11797.5 69 8370.0 70 6881.0 71 5392.0 72 4044.5 73 2697.0 74 2141.5 75 1383.5 76 1181.0 77 824.0 78 467.0 79 325.0 80 183.0 81 122.5 82 62.0 83 47.5 84 33.0 85 25.5 86 18.0 87 14.5 88 11.0 89 10.5 90 10.0 91 8.5 92 7.0 93 5.5 94 4.0 95 5.0 96 6.0 97 4.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1973056.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.71371328111646 #Duplication Level Percentage of deduplicated Percentage of total 1 76.81821601838497 17.44826933408464 2 8.20684230734453 3.7281572622471977 3 2.9194030086584575 1.9893144867209083 4 1.5021334336150998 1.364761124844494 5 0.9439754460252393 1.0720593812715655 6 0.6386648080870618 0.8703869600177274 7 0.5063805822363109 0.8051248349228265 8 0.41687900683518525 0.7575096187336788 9 0.3634843214858644 0.7430470794369974 >10 5.352544076958369 32.076568977695764 >50 2.18331706424361 32.860598379669796 >100 0.14250496816396713 4.542178820877766 >500 0.004071569732148155 0.6066204887630597 >1k 0.0013571899107160518 0.4744247982754378 >5k 0.0 0.0 >10k+ 2.261983184526753E-4 0.6609784524381099 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12865 0.652034204807162 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2494 0.12640289986700834 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08788397288267541 0.0 2 0.0 0.0 0.0 0.3287286321320834 0.0 3 0.0 0.0 0.0 0.44646477342761687 0.0 4 0.0 0.0 0.0 0.634345908073567 0.0 5 0.0 0.0 0.0 1.0640853579421974 0.0 6 0.0 0.0 0.0 1.537665428654838 0.0 7 0.0 0.0 0.0 1.8255437250640631 0.0 8 0.0 0.0 0.0 2.4986112913166174 0.0 9 0.0 0.0 0.0 2.8389969671413278 0.0 10 0.0 0.0 0.0 3.5300062441207953 0.0 11 0.0 0.0 0.0 4.283101949463168 0.0 12 0.0 0.0 0.0 4.882882188848162 0.0 13 0.0 0.0 0.0 5.127173278406695 0.0 14 0.0 0.0 0.0 5.249420188783288 0.0 15 0.0 0.0 0.0 5.403445213921956 0.0 16 0.0 0.0 0.0 5.699736854909339 0.0 17 0.0 0.0 0.0 6.027907976256122 0.0 18 0.0 0.0 0.0 6.422270832657563 0.0 19 0.0 0.0 0.0 6.631641473936877 0.0 20 0.0 0.0 0.0 6.858548363553797 0.0 21 0.0 0.0 0.0 7.1326409387265235 0.0 22 0.0 0.0 0.0 7.4316187680430765 0.0 23 0.0 0.0 0.0 7.729278844594376 0.0 24 0.0 0.0 0.0 7.961811524862954 0.0 25 0.0 0.0 0.0 8.166468665866555 0.0 26 0.0 0.0 0.0 8.36823688734633 0.0 27 0.0 0.0 0.0 8.614707337247397 0.0 28 0.0 0.0 0.0 8.838775990139155 0.0 29 0.0 0.0 0.0 9.08803399396672 0.0 30 0.0 0.0 0.0 9.413975072172306 0.0 31 0.0 0.0 0.0 9.666375409517013 0.0 32 0.0 0.0 0.0 9.898806724188264 0.0 33 0.0 0.0 0.0 10.138282947873755 0.0 34 0.0 0.0 0.0 10.400211651367218 0.0 35 0.0 0.0 0.0 10.694628028804049 0.0 36 0.0 0.0 0.0 10.947129731746083 0.0 37 0.0 0.0 0.0 11.219448408965585 0.0 38 0.0 0.0 0.0 11.535557024230432 0.0 39 0.0 0.0 0.0 12.069753722144734 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 35 1.2125201E-7 45.0 9 TCGATAG 105 0.0 42.857143 1 CGTTTTT 6545 0.0 40.94347 1 CGGTCTA 235 0.0 40.212765 31 GCGATAA 125 0.0 39.600002 9 CGAGGGA 1190 0.0 39.51681 4 CGACGGT 240 0.0 39.374996 28 AGGGCGA 1475 0.0 38.59322 6 ACTCGCG 35 6.250566E-6 38.571426 1 GGGCGAT 2880 0.0 38.515625 7 CACGACG 250 0.0 37.800003 26 ACGGGAT 865 0.0 37.716763 5 ACGGGTA 245 0.0 37.65306 5 ATAGGGA 2520 0.0 37.5 4 CGGACGG 90 0.0 37.5 2 CTCGACC 30 1.1402185E-4 37.499996 36 TACGGGA 525 0.0 37.285717 4 AATGCGG 345 0.0 37.173912 2 TAGGGAT 2585 0.0 37.079304 5 TCACGAC 255 0.0 37.058823 25 >>END_MODULE