SRR1547901_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547901_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1913268
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7554	0.39482184409084353	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4172	0.2180562263101667	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGTA	30	2.1662618E-6	45.000004	39
ACGTTGA	35	1.212502E-7	45.000004	21
TTACGTA	30	2.1662618E-6	45.000004	43
CTTTCGT	30	2.1662618E-6	45.000004	20
GTGCGTA	35	1.212502E-7	45.000004	16
GCGTATC	30	2.1662618E-6	45.000004	33
GTTGCGT	45	3.8562575E-10	45.000004	18
AACACGA	30	2.1662618E-6	45.000004	24
ACGTTGC	25	3.8917813E-5	45.0	23
CGACGAA	20	7.034464E-4	45.0	16
CGCATTA	20	7.034464E-4	45.0	33
ATTACGA	25	3.8917813E-5	45.0	10
ATAGCCG	20	7.034464E-4	45.0	1
CGTTCAC	75	0.0	45.0	21
TAGCCGT	25	3.8917813E-5	45.0	44
CGTTACA	20	7.034464E-4	45.0	28
TCTACGA	20	7.034464E-4	45.0	13
ACTACGC	25	3.8917813E-5	45.0	10
CGTGTAC	20	7.034464E-4	45.0	21
TAGGCGA	55	1.8189894E-12	45.0	5