##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547901_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1913268 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51280636063531 31.0 31.0 33.0 30.0 34.0 2 31.925371145077428 31.0 31.0 34.0 30.0 34.0 3 32.010687472952036 33.0 31.0 34.0 30.0 34.0 4 35.75751436808643 37.0 35.0 37.0 35.0 37.0 5 35.64177940570793 37.0 35.0 37.0 33.0 37.0 6 35.699842363955284 37.0 35.0 37.0 33.0 37.0 7 36.027586307825146 37.0 35.0 37.0 35.0 37.0 8 36.05432955550398 37.0 35.0 37.0 35.0 37.0 9 37.82086043356184 39.0 38.0 39.0 35.0 39.0 10 37.3588822893604 39.0 37.0 39.0 34.0 39.0 11 37.04272480384348 39.0 37.0 39.0 33.0 39.0 12 36.08483599788425 37.0 35.0 39.0 32.0 39.0 13 35.68381951718212 37.0 35.0 39.0 31.0 39.0 14 36.62232264376972 38.0 35.0 41.0 31.0 41.0 15 36.93878641152207 38.0 35.0 41.0 32.0 41.0 16 37.11461175329332 38.0 35.0 41.0 33.0 41.0 17 37.06582193398938 38.0 35.0 41.0 33.0 41.0 18 37.00230757008428 38.0 35.0 41.0 32.0 41.0 19 36.91703201015226 38.0 35.0 41.0 32.0 41.0 20 36.74981863492203 38.0 35.0 41.0 32.0 41.0 21 36.60504905742426 38.0 35.0 41.0 32.0 41.0 22 36.495395835816 38.0 35.0 40.0 31.0 41.0 23 36.457417361289686 38.0 35.0 40.0 31.0 41.0 24 36.437939692714245 37.0 35.0 40.0 32.0 41.0 25 36.38596631522609 37.0 35.0 40.0 31.0 41.0 26 36.26913950371824 37.0 35.0 40.0 31.0 41.0 27 36.185280891124506 37.0 35.0 40.0 31.0 41.0 28 36.18609624997648 37.0 35.0 40.0 31.0 41.0 29 36.246143770762906 37.0 35.0 40.0 31.0 41.0 30 36.17721511048112 37.0 35.0 40.0 31.0 41.0 31 35.9961641547342 37.0 35.0 40.0 31.0 41.0 32 35.83554055155891 37.0 35.0 40.0 30.0 41.0 33 35.73051240077187 37.0 35.0 40.0 30.0 41.0 34 35.63307126863565 37.0 35.0 40.0 30.0 41.0 35 35.57974784504837 37.0 35.0 40.0 30.0 41.0 36 35.40622066537463 37.0 35.0 40.0 29.0 41.0 37 35.26922417559903 36.0 34.0 40.0 29.0 41.0 38 35.194068996084184 36.0 34.0 40.0 29.0 41.0 39 35.16369060685696 36.0 34.0 40.0 28.0 41.0 40 34.9565575758336 36.0 34.0 40.0 27.0 41.0 41 34.93844040667591 36.0 34.0 40.0 27.0 41.0 42 34.846397368272505 36.0 34.0 40.0 27.0 41.0 43 34.748008120137904 36.0 34.0 40.0 27.0 41.0 44 34.50729171239993 35.0 34.0 40.0 26.0 41.0 45 34.38248431479542 35.0 34.0 40.0 25.0 41.0 46 34.36620536171618 35.0 34.0 40.0 25.0 41.0 47 34.289629576201555 35.0 33.0 40.0 24.0 41.0 48 34.21504985187647 35.0 34.0 40.0 24.0 41.0 49 34.12690537865056 35.0 34.0 40.0 24.0 41.0 50 33.99245009063027 35.0 33.0 39.0 24.0 41.0 51 33.64753291227366 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 1.0 11 2.0 12 3.0 13 6.0 14 19.0 15 63.0 16 120.0 17 300.0 18 686.0 19 1394.0 20 2545.0 21 4035.0 22 6500.0 23 9796.0 24 14263.0 25 20169.0 26 26320.0 27 30559.0 28 34053.0 29 39166.0 30 47163.0 31 57605.0 32 72531.0 33 97687.0 34 189377.0 35 320371.0 36 120533.0 37 148976.0 38 236020.0 39 432913.0 40 89.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.81631219463243 24.280654879504596 30.122439720938203 12.780593204924767 2 29.429071097201227 26.279590731669582 31.247634936663342 13.043703234465845 3 29.026984196672917 24.76615926258109 32.35046005055225 13.856396490193742 4 25.50515662207281 28.448602077701608 30.868179470936642 15.178061829288945 5 23.208144389599365 33.18986153534163 29.29683661672071 14.3051574583383 6 21.902995293915957 40.70062322685583 26.443812367112184 10.952569112116024 7 88.78458219130827 3.811645833202667 5.777496931950987 1.626275043538072 8 89.39479466546244 2.899071118107866 5.087159770612376 2.6189744458173134 9 84.78618782104755 5.242077952487576 7.235891678531184 2.7358425479336925 10 50.904525659761205 27.246365903783477 11.692089137538494 10.157019298916827 11 44.32337759268435 19.75060472448188 21.14319583038027 14.782821852453498 12 41.44761737508807 20.41334512467673 23.53941005651064 14.599627443724557 13 22.17556557680367 39.8346703127842 23.765097205409802 14.224666905002332 14 14.62978526792901 41.83412883087994 26.89053493812681 16.64555096306424 15 13.0873981062768 25.345952579565434 47.36712264042466 14.199526673733109 16 15.477810740575812 20.400592075966355 45.4123520594083 18.70924512404953 17 16.57258679913112 20.592149139587345 27.15463803293632 35.680626028345216 18 20.925348670442407 24.84299115440179 32.90704700021116 21.324613174944652 19 26.477106186901157 26.93924740287299 25.212568234037256 21.371078176188597 20 29.698714450876718 24.533311590430614 26.141972792102308 19.626001166590356 21 21.90519049082512 28.062508754654342 28.74082459958563 21.29147615493491 22 22.38609541371099 24.442524518258814 26.859279515467776 26.312100552562423 23 18.596715149158403 29.512958979087088 25.474632931716833 26.415692940037673 24 20.59889153009406 25.46329108101949 35.88896066834338 18.04885672054307 25 16.852997070980123 26.875220826355743 33.644580895096766 22.627201207567367 26 16.583249184118483 34.129719412021736 26.785792685603898 22.501238718255884 27 17.212695764524362 34.38483265282229 29.103345689155937 19.29912589349741 28 13.978857117769177 29.736816797228617 37.72759487954641 18.556731205455794 29 14.934238172592654 25.26044443329424 37.0247660024628 22.78055139165031 30 17.674575647530823 30.81993740552813 32.21587357338334 19.289613373557703 31 27.234814986713836 28.88084680243437 23.892261826362017 19.992076384489785 32 27.79108833681429 27.879837011856157 26.224083609823612 18.104991041505947 33 25.515975806839396 29.637771603350917 24.666173270028036 20.18007931978165 34 18.486850770514117 29.213837266917132 27.988028859522036 24.311283103046723 35 19.451012612974242 26.94238339845751 29.846210776535226 23.760393212033023 36 28.49004948601032 25.273406548376915 27.042421657603636 19.194122308009124 37 20.799124848165548 29.95957701691556 30.319014377494426 18.92228375742447 38 19.744646332871298 31.272461568374112 24.891755885741045 24.091136213013545 39 19.97942786896556 29.268508123273897 29.210283138588007 21.541780869172538 40 23.329037019382543 26.4981696239105 25.95156559352898 24.22122776317798 41 18.22917646665287 23.394945193250503 28.976912800506778 29.398965539589856 42 22.430887883976524 25.15178218629068 26.415327073886147 26.002002855846644 43 22.389335942481658 26.27540940422356 26.9749977525365 24.360256900758284 44 19.42362491820278 30.70076957331644 27.1819734611147 22.693632047366076 45 17.899740130499232 35.705870792800596 22.90405735108725 23.490331725612933 46 23.56789534973668 31.01551899681592 25.401930100749087 20.014655552698315 47 21.42574903254536 28.0729620732694 27.913810297355102 22.587478596830135 48 23.42567794997878 24.275166887231688 29.782968198914112 22.51618696387542 49 21.941149906860932 22.608385234060258 30.4653085715122 24.985156287566614 50 19.73445434722161 29.585348210496388 28.8259668797053 21.854230562576703 51 17.845173807328614 31.6625271524951 25.012439449151923 25.47985959102436 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1426.0 1 1903.5 2 2381.0 3 7123.5 4 11866.0 5 9010.5 6 6155.0 7 6356.0 8 6557.0 9 7033.0 10 7509.0 11 7956.0 12 8403.0 13 8259.5 14 8116.0 15 7750.5 16 7385.0 17 6857.5 18 6330.0 19 5958.5 20 5587.0 21 5870.0 22 6153.0 23 6848.0 24 7543.0 25 9266.0 26 13139.0 27 15289.0 28 17471.5 29 19654.0 30 23972.0 31 28290.0 32 34318.5 33 40347.0 34 45254.5 35 50162.0 36 51931.0 37 53700.0 38 64632.0 39 75564.0 40 105858.0 41 136152.0 42 162278.0 43 188404.0 44 198255.5 45 208107.0 46 200313.0 47 192519.0 48 181687.0 49 170855.0 50 160110.5 51 149366.0 52 131129.5 53 112893.0 54 99647.0 55 86401.0 56 77020.5 57 67640.0 58 65722.5 59 63805.0 60 56287.5 61 48770.0 62 44990.0 63 41210.0 64 34447.5 65 27685.0 66 21524.5 67 15364.0 68 12728.0 69 10092.0 70 8248.0 71 6404.0 72 5070.5 73 3737.0 74 3135.5 75 1835.5 76 1137.0 77 806.0 78 475.0 79 308.0 80 141.0 81 108.5 82 76.0 83 58.0 84 40.0 85 31.5 86 23.0 87 19.5 88 16.0 89 13.0 90 10.0 91 7.0 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1913268.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.367359455705866 #Duplication Level Percentage of deduplicated Percentage of total 1 77.92417879530453 14.312614022240513 2 9.407556413494293 3.455839404929615 3 3.279666581469381 1.8071644499014248 4 1.6597292060627968 1.219393717075548 5 0.9646812139460738 0.8859323308357114 6 0.5798998215183779 0.6390737082076634 7 0.3890773955733027 0.50024270664093 8 0.3000649838688146 0.440912113503128 9 0.22131052735552076 0.3658401006543608 >10 2.1199460832063615 9.070986758276115 >50 1.4181576779594105 19.760245355250323 >100 1.7245126193150373 45.40435740091239 >500 0.008917413043902683 1.0806397363535982 >1k 0.002013609397010283 0.6576405807653273 >5k 2.876584852871833E-4 0.3991176144533849 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7554 0.39482184409084353 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4172 0.2180562263101667 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09052573920642587 0.0 2 0.0 0.0 0.0 0.3602213594749925 0.0 3 0.0 0.0 0.0 0.5146168754194395 0.0 4 0.0 0.0 0.0 0.9135677803632319 0.0 5 0.0 0.0 0.0 1.4869323063993125 0.0 6 0.0 0.0 0.0 2.126518605861803 0.0 7 0.0 0.0 0.0 2.4440381587942723 0.0 8 0.0 0.0 0.0 3.2181586688325945 0.0 9 0.0 0.0 0.0 3.468097516918696 0.0 10 0.0 0.0 0.0 3.9689682783593305 0.0 11 0.0 0.0 0.0 4.638973734991648 0.0 12 0.0 0.0 0.0 5.160071667952425 0.0 13 0.0 0.0 0.0 5.359677786907009 0.0 14 0.0 0.0 0.0 5.438234476299191 0.0 15 0.0 0.0 0.0 5.572089221165044 0.0 16 0.0 0.0 0.0 5.892797036275106 0.0 17 0.0 0.0 0.0 6.277061028564739 0.0 18 0.0 0.0 0.0 6.813211740331203 0.0 19 0.0 0.0 0.0 7.040675953394924 0.0 20 0.0 0.0 0.0 7.276607354536845 0.0 21 0.0 0.0 0.0 7.597001570088456 0.0 22 0.0 0.0 0.0 7.9077787325142115 0.0 23 0.0 0.0 0.0 8.265073162776988 0.0 24 0.0 0.0 0.0 8.492014709909956 0.0 25 0.0 0.0 0.0 8.685244304509352 0.0 26 0.0 0.0 0.0 8.885791222139293 0.0 27 0.0 0.0 0.0 9.07133762755662 0.0 28 0.0 0.0 0.0 9.260176828337693 0.0 29 0.0 0.0 0.0 9.48032371837087 0.0 30 0.0 0.0 0.0 9.768939845332698 0.0 31 0.0 0.0 0.0 10.031422675756872 0.0 32 0.0 0.0 0.0 10.24555890758639 0.0 33 0.0 0.0 0.0 10.469834858472518 0.0 34 0.0 0.0 0.0 10.708013723116677 0.0 35 0.0 0.0 0.0 11.017797820274003 0.0 36 0.0 0.0 0.0 11.262039609714897 0.0 37 5.2266593075303614E-5 0.0 0.0 11.506856331679618 0.0 38 5.2266593075303614E-5 0.0 0.0 11.745244262696078 0.0 39 5.2266593075303614E-5 0.0 0.0 12.067781408563777 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGTA 30 2.1662618E-6 45.000004 39 ACGTTGA 35 1.212502E-7 45.000004 21 TTACGTA 30 2.1662618E-6 45.000004 43 CTTTCGT 30 2.1662618E-6 45.000004 20 GTGCGTA 35 1.212502E-7 45.000004 16 GCGTATC 30 2.1662618E-6 45.000004 33 GTTGCGT 45 3.8562575E-10 45.000004 18 AACACGA 30 2.1662618E-6 45.000004 24 ACGTTGC 25 3.8917813E-5 45.0 23 CGACGAA 20 7.034464E-4 45.0 16 CGCATTA 20 7.034464E-4 45.0 33 ATTACGA 25 3.8917813E-5 45.0 10 ATAGCCG 20 7.034464E-4 45.0 1 CGTTCAC 75 0.0 45.0 21 TAGCCGT 25 3.8917813E-5 45.0 44 CGTTACA 20 7.034464E-4 45.0 28 TCTACGA 20 7.034464E-4 45.0 13 ACTACGC 25 3.8917813E-5 45.0 10 CGTGTAC 20 7.034464E-4 45.0 21 TAGGCGA 55 1.8189894E-12 45.0 5 >>END_MODULE