##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547896_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1644350 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49104022866178 31.0 31.0 33.0 30.0 34.0 2 31.899506187855383 31.0 31.0 34.0 30.0 34.0 3 31.97865782832122 33.0 31.0 34.0 30.0 34.0 4 35.74027183993675 37.0 35.0 37.0 35.0 37.0 5 35.656221607322045 37.0 35.0 37.0 33.0 37.0 6 35.694299267187645 37.0 35.0 37.0 33.0 37.0 7 35.999010551281664 37.0 35.0 37.0 35.0 37.0 8 36.02370237479855 37.0 35.0 37.0 35.0 37.0 9 37.79801988627725 39.0 38.0 39.0 35.0 39.0 10 37.32596345060358 39.0 37.0 39.0 34.0 39.0 11 37.06664213823091 39.0 37.0 39.0 33.0 39.0 12 36.243640344208956 38.0 35.0 39.0 32.0 39.0 13 35.93049958950345 38.0 35.0 39.0 32.0 39.0 14 36.94086721196825 39.0 35.0 41.0 32.0 41.0 15 37.1926505914191 39.0 35.0 41.0 32.0 41.0 16 37.321741721652934 39.0 35.0 41.0 33.0 41.0 17 37.24245142457506 39.0 35.0 41.0 33.0 41.0 18 37.170227141423666 38.0 35.0 41.0 32.0 41.0 19 37.08416334721927 38.0 35.0 41.0 32.0 41.0 20 36.944136588925716 38.0 35.0 41.0 32.0 41.0 21 36.814034724967314 38.0 35.0 41.0 32.0 41.0 22 36.70919451454982 38.0 35.0 41.0 32.0 41.0 23 36.65708395414602 38.0 35.0 41.0 32.0 41.0 24 36.67082737859945 38.0 35.0 41.0 32.0 41.0 25 36.6335220603886 38.0 35.0 41.0 32.0 41.0 26 36.518876151670874 38.0 35.0 40.0 31.0 41.0 27 36.45496396752516 38.0 35.0 40.0 31.0 41.0 28 36.437175175601304 38.0 35.0 40.0 31.0 41.0 29 36.47822726305227 38.0 35.0 40.0 31.0 41.0 30 36.42519171709186 38.0 35.0 40.0 31.0 41.0 31 36.25998053942287 38.0 35.0 40.0 31.0 41.0 32 36.071270714872135 38.0 35.0 40.0 30.0 41.0 33 35.97019430169976 38.0 35.0 40.0 30.0 41.0 34 35.8757101590294 38.0 35.0 40.0 30.0 41.0 35 35.75826314349135 38.0 35.0 40.0 30.0 41.0 36 35.62018791619789 38.0 35.0 40.0 29.0 41.0 37 35.487219874114395 37.0 34.0 40.0 29.0 41.0 38 35.424873658284426 37.0 34.0 40.0 29.0 41.0 39 35.336688661173106 37.0 34.0 40.0 28.0 41.0 40 35.164564721622526 37.0 34.0 40.0 27.0 41.0 41 35.117314440356374 37.0 34.0 40.0 27.0 41.0 42 35.01989965639918 37.0 34.0 40.0 27.0 41.0 43 34.94302490345729 37.0 34.0 40.0 27.0 41.0 44 34.78834007358531 36.0 34.0 40.0 26.0 41.0 45 34.65095995378113 36.0 34.0 40.0 26.0 41.0 46 34.587211968254934 36.0 34.0 40.0 25.0 41.0 47 34.49207954510901 36.0 34.0 40.0 25.0 41.0 48 34.4196290327485 36.0 34.0 40.0 24.0 41.0 49 34.287568340073584 36.0 34.0 40.0 24.0 41.0 50 34.17683704807371 35.0 34.0 40.0 24.0 41.0 51 33.81402012953447 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 5.0 12 5.0 13 10.0 14 24.0 15 42.0 16 95.0 17 239.0 18 555.0 19 1155.0 20 2017.0 21 3182.0 22 5002.0 23 7774.0 24 11653.0 25 16462.0 26 22107.0 27 25518.0 28 28741.0 29 33252.0 30 39791.0 31 47952.0 32 60484.0 33 80391.0 34 148508.0 35 246247.0 36 108821.0 37 137851.0 38 218590.0 39 397801.0 40 74.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.65387539149208 24.383190926505915 29.963146532064343 12.999787149937667 2 29.150667436981177 26.780247514215343 30.56447836531152 13.504606683491957 3 28.90807918022319 25.569313102441694 31.98941831118679 13.533189406148328 4 25.068142427098856 28.36111533432663 31.087177304101925 15.483564934472588 5 23.033295831179494 32.57426946817892 29.61808617386809 14.774348526773498 6 21.452610453978778 39.820962690424786 27.33706327728282 11.389363578313619 7 87.78988658132393 3.94526712682823 6.43482227019795 1.8300240216498922 8 88.02730562228236 3.0911302338309974 5.64314166692006 3.2384224769665826 9 83.57880013379146 5.068507312919999 8.030528780369142 3.3221637729193905 10 46.94547997689057 26.79386991820476 13.548757867850519 12.711892237054156 11 40.51746890868732 20.92845197190379 22.858393894243925 15.69568522516496 12 37.635174993158394 20.83698725940341 24.840210417490194 16.687627329948004 13 21.44847508133913 37.67324474716453 25.154377109496153 15.723903062000183 14 15.420561316021528 39.313528141818956 26.960744367075133 18.30516617508438 15 14.046705385106579 26.164016176604736 44.01441298993523 15.774865448353454 16 16.194301699759784 21.209718125703166 42.26296104843859 20.33301912609846 17 16.646881746586796 22.719676467905252 26.608872806884182 34.02456897862377 18 20.44692431659926 24.743394046279686 32.777754127770855 22.0319275093502 19 24.80706662206951 27.785751208684285 26.057165445312734 21.350016723933468 20 28.161766047374343 24.771246997293765 25.640891537689665 21.42609541764223 21 21.345577279776204 29.266092985070085 28.09973545777967 21.288594277374038 22 21.52802019034877 24.52932769787454 26.610697235989907 27.331954875786785 23 19.23562501900447 29.482348648402105 25.54285888040867 25.739167452184752 24 20.375406695654817 25.201143308906254 35.37932921823213 19.0441207772068 25 17.48763949280871 27.240550977589926 32.24112871347341 23.03068081612795 26 17.692279624167604 32.77726761334266 26.773862012345305 22.756590750144433 27 17.605436798735063 32.41165202055524 28.66257183689604 21.320339343813664 28 14.327120138656612 28.413476449660962 37.26189679812692 19.997506613555508 29 15.213366983914616 23.725058533767143 37.3986073524493 23.662967129868946 30 18.104965487882748 28.952412807492323 32.20020068720163 20.7424210174233 31 26.250737373430233 26.8266488278043 24.991394776051326 21.931219022714142 32 25.769696232553898 26.85973180892146 27.73685650865084 19.633715449873808 33 23.965518289901784 27.311582084106185 26.75233374889774 21.97056587709429 34 18.980326572809926 26.453370632772828 29.6193632742421 24.946939520175146 35 19.292547207103112 24.892328275610424 31.322832730258156 24.492291787028307 36 27.074406300361847 23.653966612947368 29.023930428436767 20.24769665825402 37 20.107823760148385 28.32480919512269 30.965791954267647 20.601575090461278 38 19.99172925472071 29.410040441511843 27.24176726366041 23.356463040107034 39 19.353726396448444 28.524766625110225 30.528962812053393 21.592544166387935 40 23.343570407759906 25.53215556298841 27.624228418524037 23.500045610727643 41 18.075531364977042 23.39605315170128 30.224952108735977 28.303463374585704 42 22.046948642320675 25.007206494967615 26.917627025876484 26.02821783683522 43 21.61279532946149 25.34478669383039 27.787514823486486 25.254903153221637 44 19.227415088028703 28.688965244625535 27.9736065922705 24.11001307507526 45 17.988506096633927 33.0214978562958 24.73214340012771 24.25785264694256 46 23.403107610910087 28.88715905981087 27.262444126858636 20.44728920242041 47 21.452306382461156 26.073524492960743 28.787362787727673 23.686806336850427 48 21.784352479703227 22.832547815246144 31.129260802140664 24.253838902909962 49 20.442363243834947 22.325721409675555 32.226533280627606 25.00538206586189 50 19.020099127314744 27.556116398576947 30.64603034633746 22.77775412777085 51 17.871560190956913 28.918904126250496 27.132848846048592 26.076686836744003 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1167.0 1 1523.5 2 1880.0 3 5825.5 4 9771.0 5 7551.5 6 5332.0 7 5484.0 8 5636.0 9 6040.0 10 6444.0 11 6623.5 12 6803.0 13 6653.0 14 6503.0 15 6315.0 16 6127.0 17 5942.5 18 5758.0 19 5655.0 20 5552.0 21 5802.0 22 6052.0 23 6118.0 24 6184.0 25 6877.0 26 9918.5 27 12267.0 28 14863.5 29 17460.0 30 19928.0 31 22396.0 32 28611.0 33 34826.0 34 39601.5 35 44377.0 36 46640.5 37 48904.0 38 55057.5 39 61211.0 40 80681.0 41 100151.0 42 125500.0 43 150849.0 44 156909.0 45 162969.0 46 167179.0 47 171389.0 48 168564.0 49 165739.0 50 153690.5 51 141642.0 52 125724.5 53 109807.0 54 94548.0 55 79289.0 56 70715.5 57 62142.0 58 56886.5 59 51631.0 60 45781.5 61 39932.0 62 34980.0 63 30028.0 64 26247.5 65 22467.0 66 18456.5 67 14446.0 68 11209.0 69 7972.0 70 6539.0 71 5106.0 72 4334.5 73 3563.0 74 2606.5 75 1225.5 76 801.0 77 527.5 78 254.0 79 220.0 80 186.0 81 117.5 82 49.0 83 39.0 84 29.0 85 20.5 86 12.0 87 10.5 88 9.0 89 5.5 90 2.0 91 3.5 92 5.0 93 5.5 94 6.0 95 5.0 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1644350.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.929715275692548 #Duplication Level Percentage of deduplicated Percentage of total 1 77.46230888443671 15.43801760664573 2 9.27433188130062 3.696695875331988 3 3.314377372988344 1.981637920795666 4 1.6367734854812626 1.304817181457778 5 0.9232983956490223 0.9200537069894368 6 0.5788352459708273 0.692161298624043 7 0.41137279849834596 0.5738979922365814 8 0.2984842097568813 0.4758964251795788 9 0.23373393979107723 0.4192425783271831 >10 2.6586270982874103 13.39140811804336 >50 2.1817374782476464 32.42572111151851 >100 1.015944349641043 26.277236956193622 >500 0.007091569056654994 1.023619268274811 >1k 0.002774961804778041 1.0147705964875875 >5k 3.083290894197823E-4 0.36482336389407816 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5937 0.36105452002310945 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3876 0.23571624045975614 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1881 0.1143917049289993 No Hit CTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTGCT 1793 0.10904004621887069 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTGC 1781 0.10831027457658042 No Hit GAGCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCT 1755 0.10672910268495149 No Hit AAGCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCT 1706 0.10374920181226625 No Hit CCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTGC 1647 0.1001611579043391 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1454678140298598 0.0 2 0.0 0.0 0.0 0.5559035485146107 0.0 3 0.0 0.0 0.0 0.8027488065192934 0.0 4 0.0 0.0 0.0 1.3933773223462158 0.0 5 0.0 0.0 0.0 2.240885456259312 0.0 6 0.0 0.0 0.0 3.129747316568857 0.0 7 0.0 0.0 0.0 3.581111077325387 0.0 8 0.0 0.0 0.0 4.647125003800894 0.0 9 0.0 0.0 0.0 4.975218171313893 0.0 10 0.0 0.0 0.0 5.683279107246024 0.0 11 0.0 0.0 0.0 6.5691610666828835 0.0 12 0.0 0.0 0.0 7.267917414175814 0.0 13 0.0 0.0 0.0 7.52090491683644 0.0 14 0.0 0.0 0.0 7.61875513120686 0.0 15 0.0 0.0 0.0 7.780156292760057 0.0 16 0.0 0.0 0.0 8.149603186669504 0.0 17 0.0 0.0 0.0 8.567640709094778 0.0 18 0.0 0.0 0.0 9.14750509319792 0.0 19 0.0 0.0 0.0 9.408033569495545 0.0 20 0.0 0.0 0.0 9.679751877641621 0.0 21 0.0 0.0 0.0 10.047435156748866 0.0 22 0.0 0.0 0.0 10.400887888831454 0.0 23 0.0 0.0 0.0 10.804938121446163 0.0 24 0.0 0.0 0.0 11.09496153495302 0.0 25 0.0 0.0 0.0 11.33943503512026 0.0 26 0.0 0.0 0.0 11.55502174111351 0.0 27 0.0 0.0 0.0 11.76203363030985 0.0 28 0.0 0.0 0.0 11.991060297381944 0.0 29 0.0 0.0 0.0 12.236324383494997 0.0 30 0.0 0.0 0.0 12.56301882202694 0.0 31 6.081430352418889E-5 0.0 0.0 12.839784717365525 0.0 32 6.081430352418889E-5 0.0 0.0 13.082372974123514 0.0 33 6.081430352418889E-5 0.0 0.0 13.337306534496914 0.0 34 6.081430352418889E-5 0.0 0.0 13.591936023352693 0.0 35 6.081430352418889E-5 0.0 0.0 13.945449569738802 0.0 36 6.081430352418889E-5 0.0 0.0 14.204336059841275 0.0 37 6.081430352418889E-5 0.0 0.0 14.462857664122602 0.0 38 6.081430352418889E-5 0.0 0.0 14.711709794143582 0.0 39 6.081430352418889E-5 0.0 0.0 14.971569313102442 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGCG 30 2.1660744E-6 45.000004 1 GTCGTAC 30 2.1660744E-6 45.000004 15 CCAACGA 30 2.1660744E-6 45.000004 2 GTTGACG 20 7.0341746E-4 45.0 1 CTTAACG 35 1.2123564E-7 45.0 1 AACGTCA 20 7.0341746E-4 45.0 26 GTCGAAT 20 7.0341746E-4 45.0 27 GGTCGAA 20 7.0341746E-4 45.0 9 TAGCGGA 25 3.891542E-5 45.0 3 CGACCGT 20 7.0341746E-4 45.0 8 TGACGTA 85 0.0 45.0 22 CCCGTCG 20 7.0341746E-4 45.0 18 TGCGCAA 20 7.0341746E-4 45.0 32 ACGGCCC 20 7.0341746E-4 45.0 11 TACGAGT 25 3.891542E-5 45.0 22 CGTAGAT 25 3.891542E-5 45.0 34 GCGATCG 20 7.0341746E-4 45.0 9 CCGACAG 35 1.2123564E-7 45.0 30 ACCGTTG 25 3.891542E-5 45.0 1 CGCAACA 20 7.0341746E-4 45.0 34 >>END_MODULE