##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547894_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3450191 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.487560833588635 31.0 31.0 33.0 30.0 34.0 2 31.903962128473466 31.0 31.0 34.0 30.0 34.0 3 31.995331562803333 33.0 31.0 34.0 30.0 34.0 4 35.76177202943257 37.0 35.0 37.0 35.0 37.0 5 35.64179171529924 37.0 35.0 37.0 33.0 37.0 6 35.689418353940404 37.0 35.0 37.0 33.0 37.0 7 36.001203121798184 37.0 35.0 37.0 35.0 37.0 8 36.020709578107414 37.0 35.0 37.0 35.0 37.0 9 37.76839977844705 39.0 38.0 39.0 35.0 39.0 10 37.31429216527433 39.0 37.0 39.0 34.0 39.0 11 37.02242455562605 39.0 37.0 39.0 33.0 39.0 12 36.27439669282077 38.0 35.0 39.0 32.0 39.0 13 36.00103588468001 38.0 35.0 39.0 32.0 39.0 14 36.92894103543833 39.0 35.0 41.0 31.0 41.0 15 37.17114646696371 39.0 35.0 41.0 32.0 41.0 16 37.29177254244765 39.0 35.0 41.0 33.0 41.0 17 37.21996289480785 39.0 35.0 41.0 32.0 41.0 18 37.152552713748314 39.0 35.0 41.0 32.0 41.0 19 37.09653175722735 39.0 35.0 41.0 32.0 41.0 20 36.92835179269785 38.0 35.0 41.0 32.0 41.0 21 36.79784916255361 38.0 35.0 41.0 31.0 41.0 22 36.72686787485099 38.0 35.0 41.0 31.0 41.0 23 36.659889843779666 38.0 35.0 41.0 31.0 41.0 24 36.67792826542067 38.0 35.0 41.0 31.0 41.0 25 36.629418777105386 38.0 35.0 41.0 31.0 41.0 26 36.52269830858639 38.0 35.0 41.0 31.0 41.0 27 36.43438493694987 38.0 35.0 40.0 31.0 41.0 28 36.39847301207382 38.0 35.0 40.0 31.0 41.0 29 36.39851706760582 38.0 35.0 40.0 31.0 41.0 30 36.314668956008525 38.0 35.0 40.0 31.0 41.0 31 36.1353571439958 38.0 35.0 40.0 30.0 41.0 32 36.02784628445208 38.0 35.0 40.0 30.0 41.0 33 35.92171476883453 38.0 35.0 40.0 30.0 41.0 34 35.783582416161885 38.0 35.0 40.0 30.0 41.0 35 35.719812033594664 38.0 35.0 40.0 29.0 41.0 36 35.60490853984606 38.0 35.0 40.0 29.0 41.0 37 35.491614812049534 38.0 34.0 40.0 29.0 41.0 38 35.37686870089221 37.0 34.0 40.0 28.0 41.0 39 35.31069178488959 37.0 34.0 40.0 27.0 41.0 40 35.11052315654409 37.0 34.0 40.0 27.0 41.0 41 35.05003433143266 37.0 34.0 40.0 26.0 41.0 42 34.978463800989566 37.0 34.0 40.0 26.0 41.0 43 34.90227120759401 37.0 34.0 40.0 26.0 41.0 44 34.6961730524484 36.0 34.0 40.0 26.0 41.0 45 34.5467146601449 36.0 34.0 40.0 25.0 41.0 46 34.54551733512724 36.0 34.0 40.0 25.0 41.0 47 34.45660225767211 36.0 34.0 40.0 24.0 41.0 48 34.36676810066457 36.0 34.0 40.0 24.0 41.0 49 34.23635561045751 36.0 33.0 40.0 24.0 41.0 50 34.13580842335975 35.0 33.0 40.0 24.0 41.0 51 33.821375396318636 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 3.0 10 5.0 11 7.0 12 8.0 13 18.0 14 38.0 15 126.0 16 298.0 17 705.0 18 1556.0 19 3008.0 20 5269.0 21 8290.0 22 12454.0 23 18086.0 24 26124.0 25 35921.0 26 46804.0 27 55592.0 28 62243.0 29 71116.0 30 83783.0 31 102079.0 32 126688.0 33 168735.0 34 307117.0 35 460851.0 36 236793.0 37 305692.0 38 479430.0 39 831226.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.426876656973484 23.522089066953107 29.27936453373161 12.771669742341802 2 30.460313646403925 25.914536325670085 29.774525526267965 13.850624501658023 3 29.76139581837643 25.867002725356365 30.525527427322142 13.846074028945063 4 26.58887580426707 27.723247785412457 29.590477744565447 16.097398665755026 5 23.547768804683567 32.5926303790138 28.796289828592098 15.063310987710535 6 22.851169688866502 40.17392080612348 25.965432058688926 11.009477446321087 7 88.55877834009769 3.882683596357419 5.766173524886013 1.7923645386588742 8 89.38603688897223 3.0705256607532743 5.355732479738078 2.187704970536414 9 84.67203699737202 5.394599893165335 6.89376327281591 3.0395998366467247 10 48.05104992738084 30.21145785842001 11.748682899004722 9.988809315194434 11 40.90231526312601 20.88791606029927 22.159092061859763 16.050676614714952 12 37.13892940999498 20.221576138828258 25.839497001760193 16.79999744941657 13 24.730572887124218 31.731518631867043 26.32503533862328 17.21287314238545 14 18.502772745045128 34.8381582352977 29.349418626389088 17.309650393268083 15 17.89898008545034 24.578639269536094 40.725397521470555 16.796983123543015 16 22.69796077956264 21.30316843328384 37.98601294826866 18.01285783888486 17 22.00199930960344 22.026316803910277 26.393292429317682 29.5783914571686 18 24.840363910287866 24.496730760702814 30.519643695088185 20.143261633921135 19 27.9849434422616 26.315644554171058 25.152491557713763 20.54692044585358 20 30.359739504276718 25.58620667667384 24.524990065767373 19.529063753282063 21 25.632928727713917 25.94450568098984 28.51740671748318 19.905158873813072 22 24.440357070086844 22.833025765819922 28.123138690002957 24.603478474090277 23 21.501389343372583 27.74492774457994 26.908510282474218 23.84517262957326 24 22.898239546738136 25.312308796817334 32.61610734014436 19.17334431630017 25 21.773055462726557 24.82091571162292 30.884782900424934 22.52124592522559 26 20.18302754832993 29.902025713938734 26.264690853346963 23.65025588438437 27 19.57700312823261 29.96167458555193 29.340694471697365 21.120627814518095 28 17.541898405044822 27.669627565546374 33.72590097185924 21.062573057549567 29 19.159490010842877 25.74967588750884 33.11845634053303 21.972377761115254 30 21.7607662880113 26.846600666455856 31.230097116362543 20.162535929170296 31 27.813938416742722 26.396509642509645 25.27280373753221 20.516748203215414 32 28.364255775984574 26.386133405367996 25.50148672928542 19.74812408936201 33 26.301529393590094 26.91343754592137 25.647333727321183 21.137699333167355 34 20.539790405806517 27.52972226754983 28.788493158784544 23.14199416785911 35 21.096107432892847 28.01566637904974 28.722815635424244 22.165410552633173 36 27.88364470256864 25.906188961712555 26.804863846668198 19.405302489050605 37 22.245753930724415 29.56810217173484 27.37877410265113 20.807369794889617 38 21.735724196138705 30.91144809084482 24.240657980963952 23.112169732052514 39 22.093269618986312 28.51581260283851 26.652785309566916 22.73813246860826 40 24.873898285631142 25.75637116901644 25.82729477875283 23.54243576659959 41 20.417536304511838 24.871637541225976 27.251737657422442 27.45908849683974 42 23.517364690824362 26.0624411807926 25.3921014807586 25.028092647624433 43 22.501102112897517 25.524412996266005 26.445608373565406 25.528876517271073 44 21.19676852672794 28.368487425768603 27.255824387693316 23.178919659810138 45 20.362669776832647 31.595758031946637 24.14382276227606 23.89774942894466 46 23.238974306060157 28.68052812148661 26.236721387308705 21.843776185144534 47 21.483970017891764 27.608065756359572 26.929726499199607 23.97823772654905 48 24.055972553403564 24.891288627209335 28.525609161927555 22.527129657459543 49 23.06805623224917 23.019160388511825 29.68206687687725 24.230716502361755 50 20.569556873807855 28.025955664483504 29.007176704130295 22.39731075757835 51 20.040832522025593 29.365417740641025 26.329730730849395 24.264019006483988 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1809.0 1 3242.5 2 4676.0 3 14614.0 4 24552.0 5 18089.0 6 11626.0 7 11065.0 8 10504.0 9 11318.5 10 12133.0 11 12231.5 12 12330.0 13 12043.0 14 11756.0 15 11630.5 16 11505.0 17 10959.5 18 10414.0 19 10580.0 20 10746.0 21 12025.0 22 13304.0 23 14196.5 24 15089.0 25 17228.5 26 22523.5 27 25679.0 28 30618.0 29 35557.0 30 43271.0 31 50985.0 32 57205.5 33 63426.0 34 73860.0 35 84294.0 36 89379.0 37 94464.0 38 108334.0 39 122204.0 40 159518.5 41 196833.0 42 228341.5 43 259850.0 44 268812.5 45 277775.0 46 280671.5 47 283568.0 48 284176.0 49 284784.0 50 270697.5 51 256611.0 52 242282.5 53 227954.0 54 213482.0 55 199010.0 56 196231.0 57 193452.0 58 183290.5 59 173129.0 60 155934.0 61 138739.0 62 120823.5 63 102908.0 64 89307.5 65 75707.0 66 62639.0 67 49571.0 68 41049.5 69 32528.0 70 27243.0 71 21958.0 72 17334.0 73 12710.0 74 10043.5 75 5637.5 76 3898.0 77 3195.5 78 2493.0 79 2047.0 80 1601.0 81 1170.0 82 739.0 83 498.5 84 258.0 85 204.0 86 150.0 87 117.5 88 85.0 89 68.5 90 52.0 91 34.0 92 16.0 93 12.0 94 8.0 95 4.5 96 1.0 97 2.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3450191.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.04951139540714 #Duplication Level Percentage of deduplicated Percentage of total 1 77.94819728283844 13.28978677825198 2 8.92326341202912 3.042745624552202 3 3.180462981092319 1.626760195164122 4 1.5049070051485176 1.0263171653323073 5 0.9020862844139259 0.7690065192877859 6 0.588348517290451 0.6018632850008664 7 0.40851114432755725 0.4875440787254449 8 0.3269531352340153 0.4459512963949148 9 0.24635291646819085 0.3780177170954583 >10 2.6204927146826136 10.548999285400855 >50 1.5004338914877537 19.146323466470815 >100 1.8394391572647835 46.46801805094545 >500 0.006919054244075027 0.7824422642710507 >1k 0.0034595271220375133 0.9711001800880916 >5k 0.0 0.0 >10k+ 1.729763561018757E-4 0.4151240930187068 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14076 0.4079774134243583 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4594 0.13315204868368158 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.695170789095445E-5 0.0 0.0 0.04628729250061808 0.0 2 8.695170789095445E-5 0.0 0.0 0.17561346603709765 0.0 3 8.695170789095445E-5 0.0 0.0 0.26250720612279144 0.0 4 8.695170789095445E-5 0.0 0.0 0.46006148645103995 0.0 5 8.695170789095445E-5 0.0 0.0 0.8131144043909453 0.0 6 8.695170789095445E-5 0.0 0.0 1.1937889815375438 0.0 7 8.695170789095445E-5 0.0 0.0 1.4000674165575182 0.0 8 8.695170789095445E-5 0.0 0.0 1.8895185802757006 0.0 9 8.695170789095445E-5 0.0 0.0 2.0677695814521573 0.0 10 8.695170789095445E-5 0.0 0.0 2.413141765195028 0.0 11 8.695170789095445E-5 0.0 0.0 2.853697085175864 0.0 12 8.695170789095445E-5 0.0 0.0 3.206141341160533 0.0 13 8.695170789095445E-5 0.0 0.0 3.345177122078169 0.0 14 8.695170789095445E-5 0.0 0.0 3.405840430283425 0.0 15 8.695170789095445E-5 0.0 0.0 3.5093129626736608 0.0 16 8.695170789095445E-5 0.0 0.0 3.7294167192482965 0.0 17 8.695170789095445E-5 0.0 0.0 4.019719487993563 0.0 18 8.695170789095445E-5 0.0 0.0 4.375351973267567 0.0 19 8.695170789095445E-5 0.0 0.0 4.557689704714899 0.0 20 8.695170789095445E-5 0.0 0.0 4.76104076556921 0.0 21 8.695170789095445E-5 0.0 0.0 4.9931438578327985 0.0 22 8.695170789095445E-5 0.0 0.0 5.264549122063097 0.0 23 8.695170789095445E-5 0.0 0.0 5.543345281464128 0.0 24 8.695170789095445E-5 0.0 0.0 5.7413343203318306 0.0 25 8.695170789095445E-5 0.0 0.0 5.910165553153434 0.0 26 8.695170789095445E-5 0.0 0.0 6.075982460101484 0.0 27 8.695170789095445E-5 0.0 0.0 6.2695079779641185 0.0 28 8.695170789095445E-5 0.0 0.0 6.46184515581891 0.0 29 8.695170789095445E-5 0.0 0.0 6.677891166025301 0.0 30 8.695170789095445E-5 0.0 0.0 6.9545715005343185 0.0 31 8.695170789095445E-5 0.0 0.0 7.1908482747766715 0.0 32 8.695170789095445E-5 0.0 0.0 7.397706387849253 0.0 33 8.695170789095445E-5 0.0 0.0 7.614216140497729 0.0 34 8.695170789095445E-5 0.0 0.0 7.853536224516266 0.0 35 8.695170789095445E-5 0.0 0.0 8.13088318878578 0.0 36 8.695170789095445E-5 0.0 0.0 8.352001381952478 0.0 37 8.695170789095445E-5 0.0 0.0 8.586828961063315 0.0 38 8.695170789095445E-5 0.0 0.0 8.857422676019965 0.0 39 8.695170789095445E-5 0.0 0.0 9.298934464787601 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTGA 115 0.0 41.086956 24 ACCGTTC 1475 0.0 40.271187 45 CGTTTTT 7575 0.0 40.0099 1 CGGTCTA 620 0.0 39.919353 31 CGTAAGG 485 0.0 39.432987 2 CGTAACG 40 3.4609002E-7 39.375 37 TACGGGA 1310 0.0 38.816795 4 TAAGGGA 3485 0.0 38.608322 4 TACGCGG 130 0.0 38.076927 2 AGGGCGA 2700 0.0 37.916668 6 ACGTAAG 190 0.0 37.894737 1 CACGACG 660 0.0 37.840908 26 ACGGTCT 655 0.0 37.78626 30 GCGATAA 340 0.0 37.72059 9 ATAGCGG 580 0.0 37.629314 2 TAGGGAC 3645 0.0 37.53086 5 CCTTACG 30 1.1403956E-4 37.500004 45 CAACGTA 30 1.1403956E-4 37.500004 25 CGACTAT 30 1.1403956E-4 37.500004 12 GGGCGAT 5625 0.0 37.44 7 >>END_MODULE