##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547889_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3439206 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.415167047277773 31.0 31.0 33.0 30.0 34.0 2 31.830300365840255 31.0 31.0 34.0 30.0 34.0 3 31.881051324055612 33.0 31.0 34.0 30.0 34.0 4 35.67139275751438 37.0 35.0 37.0 33.0 37.0 5 35.58873472539883 37.0 35.0 37.0 33.0 37.0 6 35.62682840167178 37.0 35.0 37.0 33.0 37.0 7 35.98852438615192 37.0 35.0 37.0 35.0 37.0 8 36.01794367653464 37.0 35.0 37.0 35.0 37.0 9 37.75700466910095 39.0 38.0 39.0 35.0 39.0 10 37.25224339571401 39.0 37.0 39.0 34.0 39.0 11 36.951827253150874 39.0 37.0 39.0 33.0 39.0 12 36.531069962078455 39.0 35.0 39.0 32.0 39.0 13 36.38264762273618 39.0 35.0 39.0 32.0 39.0 14 37.416081793297636 40.0 35.0 41.0 32.0 41.0 15 37.586931983719495 40.0 35.0 41.0 32.0 41.0 16 37.68111011669554 40.0 35.0 41.0 33.0 41.0 17 37.60382512707875 40.0 35.0 41.0 33.0 41.0 18 37.502564254656455 39.0 36.0 41.0 32.0 41.0 19 37.4438777438746 39.0 36.0 41.0 32.0 41.0 20 37.3061154231529 39.0 35.0 41.0 32.0 41.0 21 37.18383400122005 39.0 35.0 41.0 32.0 41.0 22 37.09661997565717 39.0 35.0 41.0 32.0 41.0 23 37.00870229930978 39.0 35.0 41.0 32.0 41.0 24 37.02887701405499 39.0 35.0 41.0 32.0 41.0 25 37.00351912621692 39.0 35.0 41.0 32.0 41.0 26 36.90488327829156 39.0 35.0 41.0 31.0 41.0 27 36.81856393597825 39.0 35.0 41.0 31.0 41.0 28 36.763117126453025 39.0 35.0 41.0 31.0 41.0 29 36.79179729274722 39.0 35.0 41.0 31.0 41.0 30 36.69843940723528 38.0 35.0 41.0 31.0 41.0 31 36.57137955679305 38.0 35.0 41.0 31.0 41.0 32 36.430382768580884 38.0 35.0 41.0 30.0 41.0 33 36.33974498765122 38.0 35.0 41.0 30.0 41.0 34 36.209682990783335 38.0 35.0 41.0 30.0 41.0 35 36.102851355807125 38.0 35.0 41.0 30.0 41.0 36 35.992100211502304 38.0 35.0 41.0 29.0 41.0 37 35.91096055310441 38.0 35.0 40.0 29.0 41.0 38 35.76390509902576 38.0 35.0 40.0 29.0 41.0 39 35.67907679854013 38.0 35.0 40.0 28.0 41.0 40 35.53921980829296 38.0 35.0 40.0 27.0 41.0 41 35.46393062817406 38.0 35.0 40.0 27.0 41.0 42 35.40378302433759 38.0 34.0 40.0 27.0 41.0 43 35.34981766140208 38.0 34.0 40.0 27.0 41.0 44 35.176099657886155 38.0 34.0 40.0 26.0 41.0 45 35.038076230385734 38.0 34.0 40.0 26.0 41.0 46 34.98812865527683 38.0 34.0 40.0 26.0 41.0 47 34.88915930014079 37.0 34.0 40.0 25.0 41.0 48 34.77557726986985 37.0 34.0 40.0 24.0 41.0 49 34.625908712650535 37.0 34.0 40.0 24.0 41.0 50 34.54630661844624 37.0 34.0 40.0 24.0 41.0 51 34.2295681038007 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 3.0 11 5.0 12 9.0 13 15.0 14 27.0 15 87.0 16 230.0 17 511.0 18 1108.0 19 2211.0 20 4030.0 21 6562.0 22 10338.0 23 15541.0 24 23503.0 25 34555.0 26 46269.0 27 54579.0 28 60648.0 29 68736.0 30 80351.0 31 96755.0 32 119496.0 33 154365.0 34 250913.0 35 363202.0 36 246567.0 37 325181.0 38 522760.0 39 950541.0 40 104.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.31708132632939 24.254493624400517 29.91324160285833 13.515183446411758 2 30.330605378101804 26.03362520302651 30.267015119187395 13.368754299684287 3 28.95691621845275 25.227218142792264 32.296029955751415 13.519835683003578 4 25.15342203985455 28.259400570945736 31.323043749051383 15.264133640148337 5 23.44799933473017 31.84298934114444 29.87736122814394 14.831650095981455 6 21.069805065471506 40.948666639916304 26.743876348203628 11.237651946408562 7 88.49548413209328 3.180385240081577 6.564160448661697 1.7599701791634466 8 89.11812784695073 2.2500251511540745 6.181194147718979 2.4506528541762256 9 84.29154868885435 4.699602175618442 8.1488576142284 2.859991521298811 10 41.63795364395154 36.449779396756114 12.509515277654204 9.402751681638145 11 30.01588157266532 24.11867739239813 28.712848256254496 17.152592778682056 12 29.528094566013202 22.54534913000268 29.646435834317575 18.280120469666546 13 23.309246378379196 29.643208345182 29.673476959507518 17.37406831693129 14 17.370317451179137 33.01055534329726 30.632128462209007 18.98699874331459 15 16.3130966856885 27.064502678815984 39.296744655597834 17.325655979897686 16 20.127378237883978 25.252660061653764 36.46882449030387 18.151137210158392 17 19.967951905178115 25.202386829983432 29.452088650694375 25.37757261414408 18 21.82608427642892 25.47262362301066 32.66044546328426 20.04084663727616 19 24.459977099365375 27.43534408814127 27.979539463469184 20.125139349024167 20 25.565842813719215 27.265682834933415 27.944676765509247 19.223797585838128 21 23.3245406061748 27.109629373756615 30.821387262059908 18.74444275800868 22 22.58120042823838 23.362747099185103 30.4226615096624 23.633390962914113 23 19.424396212381577 28.34186146453571 29.39030113345929 22.84344118962342 24 19.741649671464867 26.52347663966625 33.84211355760603 19.892760131262854 25 19.940038485627205 27.5804357168486 30.929987910000158 21.54953788752404 26 19.315853717398728 30.90472045001085 27.90335908927816 21.876066743312265 27 18.85060098173823 29.43504983417684 30.626923772521913 21.087425411563018 28 17.58144176301158 28.386028635679285 33.61630562403066 20.416223977278477 29 18.21687912849652 26.100762792342184 32.88465419053119 22.797703888630107 30 20.030757099167655 27.13998521751823 31.30045132510236 21.52880635821175 31 23.496702436550763 26.70471033139626 27.532633985867665 22.265953246185312 32 23.72884904248248 27.09453868131191 27.848113779750328 21.328498496455286 33 22.249583188677853 27.479133265061762 27.949706996324153 22.321576549936236 34 19.080363316416637 27.326481751892732 30.247155884236072 23.34599904745456 35 19.460625504840362 27.596573162526468 30.33618806201199 22.606613270621185 36 23.23399645150654 26.026705001096182 29.973953290381562 20.765345257015717 37 20.552301897589153 28.32900966095081 30.2258428253498 20.892845616110232 38 19.643022255718325 29.194965349560338 29.10581686586962 22.056195528851717 39 19.747319584811144 27.58450642386644 30.296120674364957 22.37205331695746 40 22.562475175956312 25.38489988677619 30.318684021835274 21.733940915432225 41 19.07748474502545 24.897345491953665 30.608634667420333 25.41653509560056 42 21.17398608864953 25.885102549832723 29.32394860906849 23.616962752449258 43 21.1134779364772 26.217446701360718 29.50619997755296 23.162875384609123 44 20.351790500481798 28.50358483905878 28.76335409975442 22.381270560704998 45 19.494586831960632 29.297663472324714 27.638966668469404 23.568783027245242 46 21.90432908060756 27.997886721528165 28.106807210734107 21.99097698713017 47 20.559949011486953 26.7700742555113 29.91030487850975 22.759671854491998 48 21.108912929321477 25.5866615724676 30.355843761612416 22.948581736598506 49 21.13598313099012 24.988354870281103 30.339415551147564 23.536246447581217 50 19.38211901235343 27.430197551411577 30.715985026776526 22.47169840945846 51 19.03099145558597 27.984656923720188 28.605497896898296 24.37885372379555 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1516.0 1 2518.0 2 3520.0 3 17774.0 4 32028.0 5 23397.5 6 14767.0 7 13546.0 8 12325.0 9 13023.0 10 13721.0 11 13782.5 12 13844.0 13 13673.0 14 13502.0 15 12998.0 16 12494.0 17 12006.5 18 11519.0 19 11768.0 20 12017.0 21 14248.5 22 16480.0 23 18353.0 24 20226.0 25 22367.5 26 31817.5 27 39126.0 28 48156.0 29 57186.0 30 63150.5 31 69115.0 32 81283.5 33 93452.0 34 104434.5 35 115417.0 36 122893.5 37 130370.0 38 143890.5 39 157411.0 40 182025.5 41 206640.0 42 235513.5 43 264387.0 44 274765.0 45 285143.0 46 299475.5 47 313808.0 48 313950.0 49 314092.0 50 298303.5 51 282515.0 52 252778.5 53 223042.0 54 199178.0 55 175314.0 56 160207.0 57 145100.0 58 127857.0 59 110614.0 60 98077.5 61 85541.0 62 74326.5 63 63112.0 64 52652.5 65 42193.0 66 33475.5 67 24758.0 68 20198.0 69 15638.0 70 12862.0 71 10086.0 72 7747.0 73 5408.0 74 4201.0 75 2546.0 76 2098.0 77 1569.5 78 1041.0 79 831.5 80 622.0 81 456.0 82 290.0 83 209.5 84 129.0 85 94.0 86 59.0 87 38.5 88 18.0 89 13.5 90 9.0 91 6.5 92 4.0 93 4.0 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3439206.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.470507514415797 #Duplication Level Percentage of deduplicated Percentage of total 1 75.9475779559147 15.546854652482315 2 9.354024551038117 3.8296325972411123 3 3.326398693198044 2.0427920833516033 4 1.7202095036213811 1.4085424628100378 5 1.0012490857252747 1.0248038466570593 6 0.6824577963670354 0.8382154469281828 7 0.48168325161325526 0.6902210435202165 8 0.38253876996256175 0.6264610212059197 9 0.3218335194295645 0.5929285930086404 >10 3.849757360598357 19.680338899064378 >50 2.2062902347438413 32.99774636012886 >100 0.720037428868368 18.861907242530044 >500 0.0034781554650622744 0.509166193734105 >1k 0.0023187703100415163 0.7645651194380559 >5k 0.0 0.0 >10k+ 1.4492314437759477E-4 0.5858244378993982 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19747 0.5741732248664372 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09086399593394522 0.0 2 0.0 0.0 0.0 0.31748607091287934 0.0 3 0.0 0.0 0.0 0.5054073527436275 0.0 4 0.0 0.0 0.0 0.7977713460606896 0.0 5 0.0 0.0 0.0 1.4222759555548576 0.0 6 0.0 0.0 0.0 2.250519451291955 0.0 7 0.0 0.0 0.0 2.725047583657391 0.0 8 0.0 0.0 0.0 3.800528377770916 0.0 9 0.0 0.0 0.0 4.2464452550966705 0.0 10 0.0 0.0 0.0 4.925177497364217 0.0 11 0.0 0.0 0.0 5.642232538556865 0.0 12 0.0 0.0 0.0 6.19625576368499 0.0 13 0.0 0.0 0.0 6.4348573478878555 0.0 14 0.0 0.0 0.0 6.540724806830414 0.0 15 0.0 0.0 0.0 6.672295872942766 0.0 16 0.0 0.0 0.0 6.951459144930545 0.0 17 0.0 0.0 0.0 7.30968136250053 0.0 18 0.0 0.0 0.0 7.747951125928485 0.0 19 0.0 0.0 0.0 7.98757038688581 0.0 20 0.0 0.0 0.0 8.237744409610823 0.0 21 0.0 0.0 0.0 8.567471678055924 0.0 22 0.0 0.0 0.0 8.944448224386676 0.0 23 0.0 0.0 0.0 9.337823904703585 0.0 24 0.0 0.0 0.0 9.624663367067864 0.0 25 0.0 0.0 0.0 9.874401242612393 0.0 26 0.0 0.0 0.0 10.108408743180838 0.0 27 0.0 0.0 0.0 10.36733478599421 0.0 28 0.0 0.0 0.0 10.62495238726613 0.0 29 2.907647869886247E-5 0.0 0.0 10.906936077687698 0.0 30 2.907647869886247E-5 0.0 0.0 11.273648627037753 0.0 31 5.815295739772494E-5 0.0 0.0 11.565431090780837 0.0 32 5.815295739772494E-5 0.0 0.0 11.840203814485088 0.0 33 5.815295739772494E-5 0.0 0.0 12.11977415717465 0.0 34 5.815295739772494E-5 0.0 0.0 12.410422638248479 0.0 35 5.815295739772494E-5 0.0 0.0 12.745616284688966 0.0 36 5.815295739772494E-5 0.0 0.0 13.027774433982728 0.0 37 5.815295739772494E-5 0.0 0.0 13.320952568703358 0.0 38 8.72294360965874E-5 0.0 0.0 13.63657774497951 0.0 39 8.72294360965874E-5 0.0 0.0 14.069235748018583 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTACGG 405 0.0 43.333336 2 CGTTTTT 9930 0.0 42.371605 1 CGACGGT 265 0.0 39.905663 28 GCGCGAC 380 0.0 39.67105 9 TACGGGA 1390 0.0 39.334534 4 CGGTCTA 275 0.0 39.272728 31 TATGGGA 3910 0.0 38.9578 4 TACCGGG 405 0.0 38.88889 3 CGGGTAT 180 0.0 38.75 6 AGGGATT 6985 0.0 38.235504 6 TAAGGGA 5025 0.0 37.97015 4 TACGCGG 190 0.0 37.894737 2 TAGTACG 95 0.0 37.894737 1 TAGGGAT 6460 0.0 37.54644 5 TAGGGAC 4370 0.0 37.53432 5 TATAGCG 150 0.0 37.5 1 GGGCGAT 4880 0.0 37.207993 7 ATAGGGA 5460 0.0 37.0467 4 TTAGGGA 5375 0.0 36.92093 4 TCACGAC 305 0.0 36.885246 25 >>END_MODULE