##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547888_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3316231 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.444028175359318 31.0 31.0 33.0 30.0 34.0 2 31.85695206395453 31.0 31.0 34.0 30.0 34.0 3 31.930268428224693 33.0 31.0 34.0 30.0 34.0 4 35.71860404175704 37.0 35.0 37.0 35.0 37.0 5 35.61731737023145 37.0 35.0 37.0 33.0 37.0 6 35.66880564110281 37.0 35.0 37.0 33.0 37.0 7 35.97358085127363 37.0 35.0 37.0 35.0 37.0 8 35.991267496142456 37.0 35.0 37.0 35.0 37.0 9 37.73569513100867 39.0 38.0 39.0 35.0 39.0 10 37.26198747915932 39.0 37.0 39.0 34.0 39.0 11 37.00892579557938 39.0 37.0 39.0 33.0 39.0 12 36.5592381833473 39.0 35.0 39.0 32.0 39.0 13 36.41163356834913 39.0 35.0 39.0 32.0 39.0 14 37.446009340121364 40.0 36.0 41.0 32.0 41.0 15 37.61508320741227 40.0 36.0 41.0 33.0 41.0 16 37.69121300657282 40.0 35.0 41.0 33.0 41.0 17 37.61730380060979 40.0 35.0 41.0 33.0 41.0 18 37.51016409894245 39.0 36.0 41.0 32.0 41.0 19 37.43665956925196 39.0 36.0 41.0 32.0 41.0 20 37.27699548071289 39.0 35.0 41.0 32.0 41.0 21 37.160596472320535 39.0 35.0 41.0 32.0 41.0 22 37.08958634063791 39.0 35.0 41.0 32.0 41.0 23 36.99392231723303 39.0 35.0 41.0 32.0 41.0 24 37.026859407562384 39.0 35.0 41.0 32.0 41.0 25 37.000195402551874 39.0 35.0 41.0 32.0 41.0 26 36.89397541968578 39.0 35.0 41.0 31.0 41.0 27 36.81919986876668 39.0 35.0 41.0 31.0 41.0 28 36.74031272248526 39.0 35.0 41.0 31.0 41.0 29 36.74378262551674 39.0 35.0 41.0 31.0 41.0 30 36.646565634299904 38.0 35.0 41.0 31.0 41.0 31 36.50746947362835 38.0 35.0 41.0 30.0 41.0 32 36.39867035800582 38.0 35.0 41.0 30.0 41.0 33 36.301216049183544 38.0 35.0 41.0 30.0 41.0 34 36.155200286107934 38.0 35.0 41.0 30.0 41.0 35 36.07255676700447 38.0 35.0 41.0 30.0 41.0 36 35.971523998177446 38.0 35.0 41.0 29.0 41.0 37 35.875755337912224 38.0 35.0 41.0 29.0 41.0 38 35.75534243543348 38.0 35.0 40.0 29.0 41.0 39 35.66515058812248 38.0 35.0 40.0 28.0 41.0 40 35.518441568153726 38.0 35.0 40.0 27.0 41.0 41 35.444399078351296 38.0 34.0 40.0 27.0 41.0 42 35.37663540326352 38.0 34.0 40.0 27.0 41.0 43 35.31698394954996 38.0 34.0 40.0 27.0 41.0 44 35.09814455024394 38.0 34.0 40.0 26.0 41.0 45 34.94573779691463 38.0 34.0 40.0 25.0 41.0 46 34.930771710414625 37.0 34.0 40.0 25.0 41.0 47 34.859040881048394 37.0 34.0 40.0 25.0 41.0 48 34.772507705283495 37.0 34.0 40.0 25.0 41.0 49 34.628300622001305 37.0 34.0 40.0 24.0 41.0 50 34.55709659550254 37.0 34.0 40.0 24.0 41.0 51 34.224535323383684 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 5.0 11 9.0 12 9.0 13 19.0 14 39.0 15 90.0 16 245.0 17 584.0 18 1264.0 19 2530.0 20 4474.0 21 7031.0 22 10854.0 23 15805.0 24 23186.0 25 33253.0 26 44406.0 27 52022.0 28 57255.0 29 64922.0 30 76540.0 31 92541.0 32 114632.0 33 148783.0 34 246463.0 35 337331.0 36 242625.0 37 323109.0 38 511972.0 39 904107.0 40 122.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.65540579048926 24.118343987496647 28.999638444969605 13.22661177704448 2 31.19179574643624 25.723509610759926 29.386493281077225 13.69820136172661 3 29.85576095272012 25.39186805744232 30.888409160881736 13.863961828955823 4 25.925003415021454 27.797912750951305 30.641261118420278 15.635822715606965 5 23.848338671220432 31.998615295496602 29.313579180702433 14.839466852580536 6 21.99581392249213 41.03088717281758 26.107740986680362 10.865557918009934 7 88.32852717437356 3.5682978658603695 6.2201637943798245 1.8830111653862471 8 88.62684776784246 2.9948758093148515 6.063841752881509 2.31443466996117 9 83.60856044105492 5.5459646809887495 7.768970255690872 3.0765046222654573 10 41.307466216919146 33.08753220146606 13.705136946129507 11.899864635485285 11 32.39343097631016 23.95267398441182 26.467034413465168 17.18686062581286 12 30.577423587198844 22.00630776324086 28.596349289298605 18.819919360261693 13 24.230670300108766 27.67952534066535 29.01046398758108 19.079340371644797 14 18.60108659499293 30.88726328171952 30.5858367526267 19.92581337066085 15 18.125426123813448 26.205080406039265 37.43424387504972 18.235249595097567 16 22.139470983776462 24.739380338703786 34.0974437546721 19.023704922847653 17 22.20303712256474 24.254944845518903 27.982218367779566 25.559799664136783 18 23.78715475490097 24.869799480193024 30.994372828672066 20.348672936233935 19 26.292257686512187 26.491429577734483 27.082039821713266 20.134272914040068 20 26.919747146685502 26.549718641433607 27.26115882759675 19.269375384284146 21 25.247969758439627 26.056869982820857 30.04290111273913 18.652259146000382 22 24.35508865335376 23.059310403889235 29.72724155826298 22.858359384494022 23 21.53586405772095 26.98865066999253 29.013449304345805 22.462035967940714 24 21.396760358370692 26.137021214746497 32.77247574128582 19.693742685596995 25 21.74963083090412 26.75591658120318 29.504307751782065 21.990144836110634 26 20.06865625464571 29.521978414652057 27.54322602979105 22.866139300911183 27 20.05005079561707 27.878033828162152 30.45306554338344 21.618849832837338 28 18.885113853648917 27.0874676703764 32.88193735599239 21.145481119982293 29 19.642570134589537 25.940110927133848 32.24681875297589 22.170500185300725 30 21.174248717896912 26.582828518278735 30.859822491255883 21.383100272568466 31 25.096201078875385 25.957570507000266 27.629438359390523 21.316790054733822 32 25.33939885369867 26.111600790174144 27.45885313779408 21.0901472183331 33 23.93388759709441 26.529605446665204 27.26670729511907 22.269799661121315 34 20.722229543116867 26.54507481535514 29.557591132825184 23.175104508702802 35 20.446132974452023 26.84619979730001 29.575864889991077 23.131802338256897 36 24.531734972624044 25.991253323426506 28.26802475460847 21.208986949340982 37 21.00239699827907 28.53028030918232 28.7760412347632 21.691281457775407 38 21.636912506999664 28.433182127541777 27.668368096191127 22.261537269267432 39 21.23332180418071 26.440498264445388 28.94985301084273 23.376326920531167 40 22.664434413646095 25.892948953194157 28.670771125413157 22.771845507746598 41 20.27325599453114 25.01231066231514 29.82081163827248 24.893621704881234 42 21.968523905602474 25.974306373711602 28.01704706336802 24.0401226573179 43 21.814252384710233 26.078340139755042 28.23322621373481 23.87418126179992 44 21.3024967199209 27.435091222535462 28.362047155339905 22.900364902203737 45 20.384918903417766 28.425130818691457 26.886546805695982 24.30340347219479 46 22.258823344935863 27.158240786000732 27.866906738402726 22.71602913066068 47 21.029958407601885 26.809441199964656 29.26017518080013 22.900425211633326 48 21.9369519192119 25.95606277126051 29.4952914920583 22.611693817469288 49 22.144717904150827 24.970817774756945 29.616965766256936 23.267498554835296 50 20.622296818285577 27.41802365396138 29.087991759319543 22.871687768433503 51 20.20393030521698 27.414013076893617 28.19565343909999 24.186403178789416 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1796.0 1 3119.0 2 4442.0 3 16991.0 4 29540.0 5 21840.5 6 14141.0 7 13209.5 8 12278.0 9 12750.0 10 13222.0 11 13336.0 12 13450.0 13 13358.5 14 13267.0 15 12718.5 16 12170.0 17 11785.0 18 11400.0 19 11048.5 20 10697.0 21 11720.5 22 12744.0 23 15374.0 24 18004.0 25 19710.0 26 27629.0 27 33842.0 28 39014.5 29 44187.0 30 52787.5 31 61388.0 32 68627.0 33 75866.0 34 87927.0 35 99988.0 36 107305.5 37 114623.0 38 127539.5 39 140456.0 40 161687.5 41 182919.0 42 205579.0 43 228239.0 44 239886.5 45 251534.0 46 257702.5 47 263871.0 48 267178.0 49 270485.0 50 262726.5 51 254968.0 52 236883.0 53 218798.0 54 201089.5 55 183381.0 56 172752.5 57 162124.0 58 153849.5 59 145575.0 60 133640.0 61 121705.0 62 105497.5 63 89290.0 64 77991.0 65 66692.0 66 56209.0 67 45726.0 68 37077.0 69 28428.0 70 22916.5 71 17405.0 72 14291.5 73 11178.0 74 9066.5 75 5683.0 76 4411.0 77 3066.5 78 1722.0 79 1351.5 80 981.0 81 694.5 82 408.0 83 348.5 84 289.0 85 192.0 86 95.0 87 71.0 88 47.0 89 48.0 90 49.0 91 30.0 92 11.0 93 12.0 94 13.0 95 12.5 96 12.0 97 7.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3316231.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.681767594977792 #Duplication Level Percentage of deduplicated Percentage of total 1 77.57746211409618 15.268615799378354 2 8.261432862619005 3.2519920320715863 3 2.763782226989171 1.6318835842419306 4 1.3898928644705 1.0942219336170538 5 0.8555064036994966 0.8418939106814372 6 0.6217256813968085 0.7341996221448714 7 0.4570951398690148 0.6297508218187071 8 0.3748700379088096 0.5902483971553364 9 0.29110952671896034 0.5156595044609901 >10 4.202354992163544 21.3984070489342 >50 2.5425814874387074 36.238930312960846 >100 0.6546788830584366 15.945850188149116 >500 0.005318010529702201 0.7395706952509885 >1k 0.002033356967239077 0.583184617500613 >5k 0.0 0.0 >10k+ 1.5641207440300592E-4 0.5355915316340617 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17398 0.524631728006885 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.04641443855992E-5 0.0 0.0 0.053223071613527524 0.0 2 9.04641443855992E-5 0.0 0.0 0.17589245140040002 0.0 3 9.04641443855992E-5 0.0 0.0 0.2707591841460984 0.0 4 9.04641443855992E-5 0.0 0.0 0.4439980206445208 0.0 5 9.04641443855992E-5 0.0 0.0 0.7874602221618457 0.0 6 9.04641443855992E-5 0.0 0.0 1.2548583014874417 0.0 7 9.04641443855992E-5 0.0 0.0 1.5176264862128122 0.0 8 9.04641443855992E-5 0.0 0.0 2.1407133580260242 0.0 9 9.04641443855992E-5 0.0 0.0 2.413703991066967 0.0 10 9.04641443855992E-5 0.0 0.0 2.8683164713193983 0.0 11 9.04641443855992E-5 0.0 0.0 3.3323070678731366 0.0 12 9.04641443855992E-5 0.0 0.0 3.697118807465463 0.0 13 9.04641443855992E-5 0.0 0.0 3.8567277128764554 0.0 14 9.04641443855992E-5 0.0 0.0 3.939411940844893 0.0 15 9.04641443855992E-5 0.0 0.0 4.042480756014886 0.0 16 9.04641443855992E-5 0.0 0.0 4.2513021559716435 0.0 17 9.04641443855992E-5 0.0 0.0 4.501797371775368 0.0 18 9.04641443855992E-5 0.0 0.0 4.812240160591949 0.0 19 9.04641443855992E-5 0.0 0.0 4.993349377651919 0.0 20 9.04641443855992E-5 0.0 0.0 5.183897020442786 0.0 21 9.04641443855992E-5 0.0 0.0 5.426672629258939 0.0 22 9.04641443855992E-5 0.0 0.0 5.695954232380072 0.0 23 9.04641443855992E-5 0.0 0.0 5.963155160180337 0.0 24 9.04641443855992E-5 0.0 0.0 6.17496187690182 0.0 25 9.04641443855992E-5 0.0 0.0 6.3590262560117194 0.0 26 9.04641443855992E-5 0.0 0.0 6.536004277144746 0.0 27 9.04641443855992E-5 0.0 0.0 6.73053234228858 0.0 28 9.04641443855992E-5 0.0 0.0 6.9266586073165595 0.0 29 9.04641443855992E-5 0.0 0.0 7.153783919154003 0.0 30 9.04641443855992E-5 0.0 0.0 7.427890276642369 0.0 31 9.04641443855992E-5 0.0 0.0 7.65968956927307 0.0 32 9.04641443855992E-5 0.0 0.0 7.877768466671954 0.0 33 9.04641443855992E-5 0.0 0.0 8.101124439159998 0.0 34 9.04641443855992E-5 0.0 0.0 8.335818584411038 0.0 35 9.04641443855992E-5 0.0 0.0 8.60323059521487 0.0 36 9.04641443855992E-5 0.0 0.0 8.831923952221663 0.0 37 9.04641443855992E-5 0.0 0.0 9.072015791421045 0.0 38 9.04641443855992E-5 0.0 0.0 9.357882487679538 0.0 39 9.04641443855992E-5 0.0 0.0 9.78101344568578 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9305 0.0 41.445457 1 CACGACC 395 0.0 40.443035 27 ACCCGTA 40 3.4608456E-7 39.375 33 GCGATAC 155 0.0 39.193546 9 GGGCGAT 4820 0.0 38.744812 7 ATAGGGC 1465 0.0 37.935154 4 CTATGCG 125 0.0 37.8 1 ATAGGGA 4165 0.0 37.653057 4 AGGGCGA 2420 0.0 37.097107 6 TAGGGAC 3335 0.0 37.038982 5 ACGGGAT 1600 0.0 36.84375 5 GTAGGGA 4330 0.0 36.8418 4 TAGGGAT 5155 0.0 36.83802 5 TAGGGTA 1180 0.0 36.800846 5 TCACGAC 355 0.0 36.760563 25 TAAGGGA 4160 0.0 36.724762 4 GCGTAAG 325 0.0 36.692307 1 TACGGGA 1225 0.0 36.551018 4 AGGGATT 5540 0.0 36.471123 6 ATAGCGG 630 0.0 36.428574 2 >>END_MODULE