##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547886_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1197820 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.589426625035482 31.0 31.0 33.0 30.0 34.0 2 32.00626972333072 31.0 31.0 34.0 30.0 34.0 3 32.07950192850345 33.0 31.0 34.0 30.0 34.0 4 35.83136030455327 37.0 35.0 37.0 35.0 37.0 5 35.72564158220768 37.0 35.0 37.0 35.0 37.0 6 35.78098378721344 37.0 35.0 37.0 35.0 37.0 7 36.044580153946335 37.0 35.0 37.0 35.0 37.0 8 36.073946836753436 37.0 35.0 37.0 35.0 37.0 9 37.907653904593346 39.0 38.0 39.0 35.0 39.0 10 37.506629543671 39.0 37.0 39.0 35.0 39.0 11 37.14256148670084 39.0 37.0 39.0 34.0 39.0 12 35.83742381993956 37.0 35.0 39.0 33.0 39.0 13 35.28786962982752 37.0 35.0 39.0 31.0 39.0 14 36.19284366599322 37.0 35.0 41.0 31.0 41.0 15 36.58240553672505 37.0 35.0 41.0 32.0 41.0 16 36.7985999565878 37.0 35.0 41.0 33.0 41.0 17 36.74714898732698 37.0 35.0 41.0 33.0 41.0 18 36.697997194904076 37.0 35.0 40.0 32.0 41.0 19 36.58477567581106 37.0 35.0 40.0 32.0 41.0 20 36.41081631630796 36.0 35.0 40.0 32.0 41.0 21 36.2360555008265 36.0 35.0 40.0 32.0 41.0 22 36.11577616002404 35.0 35.0 40.0 31.0 41.0 23 36.10970596583794 35.0 35.0 40.0 32.0 41.0 24 36.068732363794226 35.0 35.0 40.0 32.0 41.0 25 36.00517440016029 35.0 35.0 40.0 32.0 41.0 26 35.88332554140021 35.0 35.0 40.0 31.0 41.0 27 35.776692658329296 35.0 35.0 40.0 31.0 41.0 28 35.792631614098944 36.0 35.0 40.0 31.0 41.0 29 35.86447212435925 36.0 35.0 40.0 31.0 41.0 30 35.85268487752751 36.0 35.0 40.0 31.0 41.0 31 35.61235828421633 35.0 35.0 40.0 31.0 41.0 32 35.36505484964352 35.0 34.0 40.0 30.0 41.0 33 35.240296538711995 35.0 34.0 40.0 30.0 41.0 34 35.1579110383864 35.0 34.0 40.0 30.0 41.0 35 35.08819522131873 35.0 34.0 40.0 30.0 41.0 36 34.86851446795011 35.0 34.0 40.0 29.0 41.0 37 34.69919520462173 35.0 34.0 40.0 27.0 41.0 38 34.63555125144011 35.0 34.0 40.0 27.0 41.0 39 34.6240962748994 35.0 34.0 40.0 27.0 41.0 40 34.406915897213274 35.0 34.0 40.0 26.0 41.0 41 34.41435357566245 35.0 34.0 40.0 26.0 41.0 42 34.32198243475647 35.0 34.0 40.0 26.0 41.0 43 34.207784141189826 35.0 34.0 40.0 26.0 41.0 44 33.9512481007163 35.0 34.0 40.0 24.0 41.0 45 33.82431083134361 35.0 34.0 39.0 23.0 41.0 46 33.82907532016497 35.0 34.0 39.0 23.0 41.0 47 33.783837304436396 35.0 33.0 39.0 23.0 41.0 48 33.75678482576681 35.0 33.0 39.0 23.0 41.0 49 33.70823579502763 35.0 34.0 39.0 24.0 41.0 50 33.55609023058556 35.0 33.0 39.0 24.0 41.0 51 33.17619926199262 35.0 33.0 38.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 1.0 12 1.0 13 5.0 14 11.0 15 32.0 16 91.0 17 200.0 18 490.0 19 982.0 20 1740.0 21 2782.0 22 4286.0 23 6511.0 24 9560.0 25 13884.0 26 17857.0 27 20410.0 28 22452.0 29 25499.0 30 30233.0 31 36875.0 32 46640.0 33 64109.0 34 137314.0 35 254127.0 36 67889.0 37 79890.0 38 125328.0 39 228571.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.775709205055854 24.532901437611663 29.449165984872515 13.242223372459968 2 28.936150673723933 26.864470454659294 31.198510627640214 13.000868243976557 3 28.685111285501996 25.914077240319916 31.341269973785714 14.059541500392381 4 24.927535021956555 28.401262293165917 31.263545440884272 15.407657243993256 5 23.807667262192982 32.94134344058372 29.686179893473142 13.564809403750147 6 20.74902739977626 41.555826417992684 26.831076455560936 10.864069726670117 7 88.28096041141407 4.582908951261459 5.728907515319497 1.4072231220049758 8 89.3709405419846 3.419795962665509 5.003589854903074 2.2056736404468116 9 86.42425406154514 4.906329832529095 6.351037718521982 2.3183783874037833 10 58.9571888931559 21.780985456913392 10.151358300913325 9.110467349017382 11 54.015795361573524 17.59554857992019 16.727555058356014 11.661101000150273 12 48.278622831477186 20.477367217111084 19.292798584094438 11.951211367317294 13 20.446394282947356 48.32337079026899 19.632248584929286 11.59798634185437 14 12.99243625920422 49.98897998029754 24.16982518241472 12.848758578083519 15 11.768713162244744 23.186622363961195 53.13628091032041 11.908383563473643 16 13.786629042761017 17.713178941744168 51.1610258636523 17.339166151842512 17 14.524970362825801 17.621679384214655 26.444373946001903 41.40897630695764 18 21.660015695179577 23.622664507188055 33.983737122439095 20.73358267519327 19 29.55936618189711 26.465328680436123 23.344325524703212 20.63097961296355 20 33.70823662987761 23.445342371975755 22.840326593311183 20.00609440483545 21 20.8674926115777 29.152209847890337 27.677280392713428 22.303017147818537 22 22.024845135329183 24.597602310864737 25.592576514000438 27.78497603980565 23 19.22567664590673 32.058406104423035 21.89010034896729 26.825816900702943 24 20.851463492010485 24.368936902038705 38.08326793675177 16.696331669199044 25 15.479203887061496 25.905311315556595 36.334006778981816 22.281478018400094 26 15.079143777863118 38.75139837371224 25.56995207961129 20.599505768813344 27 16.24826768629677 36.93743634268922 28.89006695496819 17.924229016045818 28 12.769948740211385 30.388288724516205 41.647910370506416 15.193852164765993 29 13.031841178140288 25.385867659581574 40.87250171144245 20.709789450835686 30 16.976841261625285 32.56449216075871 32.49094187774457 17.967724699871432 31 30.841027867292247 28.369287539029237 22.240904309495583 18.548780284182932 32 30.932193484830776 29.605449900652854 23.51905962498539 15.94329698953098 33 27.468150473359938 31.45622881568182 22.32088293733616 18.75473777362208 34 17.647643218513632 31.355211968409275 26.338932393848825 24.658212419228263 35 17.659832028184535 28.270858726686814 30.222737973986074 23.846571271142576 36 32.24808401930173 23.67500960077474 26.312801589554358 17.76410479036917 37 19.790285685662287 32.362291496218134 30.408074668981982 17.4393481491376 38 19.06071029036082 33.95318161326409 22.218864270090666 24.767243826284417 39 19.519126412983585 31.854285284934296 28.417458382728622 20.20912991935349 40 23.632348766926583 27.458048788632684 24.15304469786779 24.75655774657294 41 15.776243509041427 23.519977959960595 28.12300679567882 32.58077173531916 42 22.97206591975422 25.398306924245713 23.274532066587632 28.35509508941243 43 23.671503230869412 26.607420146599658 24.64109799469035 25.07997862784058 44 18.90217227964135 33.631513916949125 26.769130587233477 20.697183216176054 45 17.13496184735603 40.01736487953115 20.130153111485864 22.717520161626954 46 23.838974136347698 33.51872568499441 23.534671319563873 19.10762885909402 47 21.762702242407038 29.093519894474962 25.100682907281563 24.043094955836438 48 24.543253577332152 22.65991551318228 30.480539647025427 22.316291262460137 49 20.536057170526455 21.755689502596383 31.700839859077323 26.007413467799832 50 18.30767561069276 33.559048938905676 27.13537927234476 20.997896178056802 51 17.497620677564242 36.35487802841829 22.69639845719724 23.451102836820223 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1133.0 1 1350.0 2 1567.0 3 4541.5 4 7516.0 5 5996.5 6 4477.0 7 4757.0 8 5037.0 9 5608.5 10 6180.0 11 6272.5 12 6365.0 13 6484.5 14 6604.0 15 6172.0 16 5740.0 17 5628.0 18 5516.0 19 5181.5 20 4847.0 21 4860.5 22 4874.0 23 5056.0 24 5238.0 25 5290.0 26 5896.0 27 6450.0 28 6740.0 29 7030.0 30 9242.5 31 11455.0 32 14735.5 33 18016.0 34 21050.5 35 24085.0 36 25502.0 37 26919.0 38 34355.0 39 41791.0 40 67538.5 41 93286.0 42 119563.5 43 145841.0 44 144163.0 45 142485.0 46 134823.0 47 127161.0 48 114826.5 49 102492.0 50 94731.0 51 86970.0 52 79323.0 53 71676.0 54 62883.5 55 54091.0 56 46893.0 57 39695.0 58 38206.0 59 36717.0 60 33348.0 61 29979.0 62 25267.0 63 20555.0 64 18254.5 65 15954.0 66 12565.0 67 9176.0 68 7555.5 69 5935.0 70 5277.0 71 4619.0 72 3239.5 73 1860.0 74 1595.0 75 1149.0 76 968.0 77 662.5 78 357.0 79 303.0 80 249.0 81 191.5 82 134.0 83 89.0 84 44.0 85 33.5 86 23.0 87 20.0 88 17.0 89 15.5 90 14.0 91 10.5 92 7.0 93 4.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1197820.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.60620483941674 #Duplication Level Percentage of deduplicated Percentage of total 1 80.8092726707604 14.227446075656882 2 7.786271915754181 2.741733965683318 3 2.4240915464427784 1.2803715694851014 4 1.1409398970014701 0.8035048614428368 5 0.6611532300202002 0.5820199598988828 6 0.4231175917109354 0.4469696994494057 7 0.30437365825788937 0.37512054825077196 8 0.24231413289413445 0.34129858073758246 9 0.18148570936920091 0.28757471171229043 >10 2.322818388057758 10.614389595491817 >50 2.0197527802738273 26.723087054540258 >100 1.6786432479246043 40.249997266380404 >500 0.004804359610545519 0.5170775155079887 >1k 9.608719221091039E-4 0.8094085957624644 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4798 0.4005610191848525 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4771 0.39830692424571307 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6696999549181013E-4 0.0 0.0 0.05760464844467449 0.0 2 1.6696999549181013E-4 0.0 0.0 0.22348933896578785 0.0 3 1.6696999549181013E-4 0.0 0.0 0.32475664123157066 0.0 4 1.6696999549181013E-4 0.0 0.0 0.5866490791604748 0.0 5 1.6696999549181013E-4 0.0 0.0 0.9498088193551619 0.0 6 1.6696999549181013E-4 0.0 0.0 1.409644186939607 0.0 7 1.6696999549181013E-4 0.0 0.0 1.606668781619943 0.0 8 1.6696999549181013E-4 0.0 0.0 2.132457297423653 0.0 9 1.6696999549181013E-4 0.0 0.0 2.298425472942512 0.0 10 1.6696999549181013E-4 0.0 0.0 2.6832913125511344 0.0 11 1.6696999549181013E-4 0.0 0.0 3.1104840460169307 0.0 12 1.6696999549181013E-4 0.0 0.0 3.477901521096659 0.0 13 1.6696999549181013E-4 0.0 0.0 3.620076472257935 0.0 14 1.6696999549181013E-4 0.0 0.0 3.6822727955786347 0.0 15 1.6696999549181013E-4 0.0 0.0 3.7810355479120403 0.0 16 1.6696999549181013E-4 0.0 0.0 3.9892471322903273 0.0 17 2.5045499323771516E-4 0.0 0.0 4.2298508957940255 0.0 18 2.5045499323771516E-4 0.0 0.0 4.578734701374163 0.0 19 2.5045499323771516E-4 0.0 0.0 4.726252692391177 0.0 20 2.5045499323771516E-4 0.0 0.0 4.861665358735035 0.0 21 2.5045499323771516E-4 0.0 0.0 5.042243408859428 0.0 22 2.5045499323771516E-4 0.0 0.0 5.2130537142475495 0.0 23 2.5045499323771516E-4 0.0 0.0 5.42385333355596 0.0 24 2.5045499323771516E-4 0.0 0.0 5.571120869579737 0.0 25 2.5045499323771516E-4 0.0 0.0 5.67748075670802 0.0 26 2.5045499323771516E-4 0.0 0.0 5.791855203619909 0.0 27 2.5045499323771516E-4 0.0 0.0 5.891202350937537 0.0 28 2.5045499323771516E-4 0.0 0.0 5.998146633050041 0.0 29 2.5045499323771516E-4 0.0 0.0 6.118698969795128 0.0 30 2.5045499323771516E-4 0.0 0.0 6.286503815264397 0.0 31 2.5045499323771516E-4 0.0 0.0 6.4503013808418626 0.0 32 2.5045499323771516E-4 0.0 0.0 6.573191297523835 0.0 33 2.5045499323771516E-4 0.0 0.0 6.693242724282446 0.0 34 2.5045499323771516E-4 0.0 0.0 6.833664490491059 0.0 35 2.5045499323771516E-4 0.0 0.0 7.0465512347431165 0.0 36 2.5045499323771516E-4 0.0 0.0 7.2067589454175085 0.0 37 2.5045499323771516E-4 0.0 0.0 7.360204371274482 0.0 38 2.5045499323771516E-4 0.0 0.0 7.505468267352357 0.0 39 2.5045499323771516E-4 0.0 0.0 7.663505368085355 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATTA 30 2.1655778E-6 45.000004 41 GTCGATG 30 2.1655778E-6 45.000004 1 TAGCGAT 30 2.1655778E-6 45.000004 13 CGTCTAG 30 2.1655778E-6 45.000004 39 ATCGTAG 30 2.1655778E-6 45.000004 1 TTGCGTT 30 2.1655778E-6 45.000004 1 AACTGTG 30 2.1655778E-6 45.000004 24 CGGTGCC 30 2.1655778E-6 45.000004 20 TCGACCG 30 2.1655778E-6 45.000004 15 GCGTATT 30 2.1655778E-6 45.000004 40 TCTTGCG 20 7.033405E-4 45.0 1 ACCGGTC 25 3.8909046E-5 45.0 23 TCGCAAT 45 3.8562575E-10 45.0 22 CGAGTCA 20 7.033405E-4 45.0 42 TTTACGC 25 3.8909046E-5 45.0 25 TCCGATT 45 3.8562575E-10 45.0 30 GCGGTAT 35 1.2119926E-7 45.0 9 CGGTTGA 55 1.8189894E-12 45.0 42 CACATCG 25 3.8909046E-5 45.0 19 TTAGACA 25 3.8909046E-5 45.0 24 >>END_MODULE