##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547885_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1875191 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.426995436731513 31.0 31.0 33.0 30.0 34.0 2 31.791828139106897 31.0 31.0 34.0 30.0 34.0 3 31.592746018938872 31.0 31.0 34.0 30.0 34.0 4 35.51846505236 37.0 35.0 37.0 33.0 37.0 5 35.52501105220748 37.0 35.0 37.0 33.0 37.0 6 35.60659687466504 37.0 35.0 37.0 33.0 37.0 7 35.97268064959783 37.0 35.0 37.0 35.0 37.0 8 36.008844432380485 37.0 35.0 37.0 35.0 37.0 9 37.75587020202209 39.0 38.0 39.0 35.0 39.0 10 37.3296618851093 39.0 37.0 39.0 34.0 39.0 11 37.010645848876194 39.0 37.0 39.0 33.0 39.0 12 36.45647083417103 39.0 35.0 39.0 32.0 39.0 13 36.26609556039892 39.0 35.0 39.0 32.0 39.0 14 37.32623556747019 40.0 35.0 41.0 32.0 41.0 15 37.53390827920996 40.0 35.0 41.0 33.0 41.0 16 37.63596561630255 40.0 35.0 41.0 33.0 41.0 17 37.56744779598451 40.0 35.0 41.0 33.0 41.0 18 37.39750777387477 39.0 35.0 41.0 33.0 41.0 19 37.24634930521744 39.0 35.0 41.0 32.0 41.0 20 36.99413446416925 38.0 35.0 41.0 32.0 41.0 21 36.8812355648038 38.0 35.0 41.0 32.0 41.0 22 36.793881796574325 38.0 35.0 41.0 32.0 41.0 23 36.704818869117865 38.0 35.0 41.0 32.0 41.0 24 36.65058172740803 38.0 35.0 41.0 32.0 41.0 25 36.55859749753492 38.0 35.0 40.0 32.0 41.0 26 36.41759852729668 38.0 35.0 40.0 31.0 41.0 27 36.32312388444697 38.0 35.0 40.0 31.0 41.0 28 36.24384662682361 37.0 35.0 40.0 31.0 41.0 29 36.20198955733043 37.0 35.0 40.0 31.0 41.0 30 36.07062747208151 37.0 35.0 40.0 31.0 41.0 31 35.86208018276538 37.0 35.0 40.0 30.0 41.0 32 35.58484655696407 37.0 35.0 40.0 30.0 41.0 33 35.37648484874341 37.0 34.0 40.0 29.0 41.0 34 35.143285137354006 37.0 34.0 40.0 27.0 41.0 35 34.95395882339452 37.0 34.0 40.0 25.0 41.0 36 34.790579732944536 37.0 34.0 40.0 24.0 41.0 37 34.64851473796536 37.0 34.0 40.0 24.0 41.0 38 34.519091655196725 36.0 34.0 40.0 23.0 41.0 39 34.43441654743437 36.0 34.0 40.0 23.0 41.0 40 34.28528827196803 36.0 34.0 40.0 23.0 41.0 41 34.204631421545855 36.0 34.0 40.0 22.0 41.0 42 34.12147029289283 36.0 33.0 40.0 22.0 41.0 43 34.03435063414874 36.0 33.0 40.0 22.0 41.0 44 33.85571549778129 35.0 33.0 40.0 21.0 41.0 45 33.730334669908295 35.0 33.0 40.0 21.0 41.0 46 33.69704686082645 35.0 33.0 40.0 21.0 41.0 47 33.61882176268978 35.0 33.0 40.0 20.0 41.0 48 33.50939131000522 35.0 33.0 40.0 20.0 41.0 49 33.37743728505523 35.0 33.0 40.0 20.0 41.0 50 33.29102582083638 35.0 33.0 40.0 20.0 41.0 51 32.9990059679254 35.0 32.0 39.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 2.0 12 7.0 13 9.0 14 24.0 15 59.0 16 168.0 17 428.0 18 940.0 19 1808.0 20 3251.0 21 5317.0 22 8020.0 23 12204.0 24 18116.0 25 27537.0 26 36269.0 27 39790.0 28 40770.0 29 42935.0 30 47779.0 31 55254.0 32 68111.0 33 88277.0 34 151581.0 35 241102.0 36 162527.0 37 163932.0 38 233911.0 39 424995.0 40 66.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.19259958052273 25.083471497036836 27.31199115183467 18.411937770605768 2 33.67998246578615 25.838594575165942 28.031064568889246 12.450358390158655 3 27.13200948596703 25.220577530502226 35.31725568222117 12.330157301309573 4 24.190069171620383 26.777378944331538 35.38114250761656 13.65140937643152 5 22.37078782907981 30.519771052655436 33.6298009109472 13.479640207317548 6 19.834512857623572 39.49555005330124 30.33221682484611 10.337720264229084 7 83.27455709845025 3.654401071677498 11.237735249369264 1.8333065805029993 8 83.6372401531364 3.272839940038108 10.850787999729095 2.239131907096397 9 79.38343347424343 5.440512459797429 12.405083002211507 2.7709710637476395 10 43.137205756640256 31.073634632418777 16.821433123345837 8.967726487595131 11 32.98762632713147 23.63897864270893 28.91369465830414 14.459700371855453 12 31.285186415677124 23.527203362217502 29.712493287350462 15.475116934754912 13 20.960424831390508 34.0724224892291 29.728385001847812 15.238767677532582 14 15.05649291192204 36.891175352270785 31.775216497946072 16.277115237861103 15 14.281051903512761 28.409319370666775 42.39338819352268 14.916240532297776 16 17.434384017414757 26.618035176150055 40.04194772692488 15.9056330795103 17 17.260481732260875 27.5629522539304 30.1663137248419 25.010252288966832 18 19.90202598028681 29.307894502480014 33.47136371708269 17.318715800150493 19 22.693848253324596 31.475620350140332 27.948459650243628 17.882071746291444 20 24.04261752536142 30.455724243557057 28.28341219641092 17.2182460346706 21 19.902879226702773 31.874246410099023 30.546701642659336 17.67617272053887 22 20.016734295333116 28.29994384572025 30.41124877412488 21.27207308482176 23 17.288372224482732 32.134379911166384 29.706307250834712 20.87094061351617 24 17.821811218163912 30.5157714600806 35.11583620015241 16.54658112160308 25 17.69419755107613 31.292332354410828 32.406192222552264 18.607277871960775 26 16.039059487806842 35.70857581974316 28.804159149654623 19.448205542795375 27 15.985251635700044 34.599568790592535 31.57811657585814 17.837062997849284 28 15.205544395210941 32.54521806045357 35.072960567750165 17.17627697658532 29 16.04049934113378 30.15943442561318 34.25635041977057 19.543715813482468 30 18.399832337079264 32.10862253498444 32.09545054343798 17.396094584498325 31 22.85324534940707 31.512469929729825 27.391449724321415 18.242834996541685 32 23.428600073272534 31.809239698782683 27.52252970497405 17.239630522970728 33 21.149525568328773 32.83420195596075 26.90349943019138 19.112773045519095 34 16.944140623541813 32.82886916586097 29.65932537005564 20.56766484054158 35 16.659369632213465 33.194858550409 29.877169845631723 20.268601971745813 36 21.859266602708736 31.905549887984748 28.516401795870394 17.718781713436123 37 17.443129793178404 35.186655652677516 29.437747941409704 17.932466612734384 38 17.068181321262742 35.631996953910296 27.391289740618426 19.90853198420854 39 16.88361345590929 35.12623514084699 28.486164876004633 19.503986527239093 40 19.99732293936991 32.23191664209139 28.096444575512574 19.674315843026125 41 16.60321535246276 30.85744332177362 29.025469938795567 23.513871386968045 42 19.197831047610617 32.318414497509856 26.995916682620596 21.487837772258935 43 19.31755218535072 32.0801987637526 27.93390113327122 20.668347917625457 44 18.37130191004543 34.632472105508185 27.516770291666287 19.479455692780096 45 16.87049479226383 36.636267985501206 25.612537602836188 20.880699619398772 46 20.11757735611999 34.191237052652234 26.796576988690752 18.894608602537023 47 18.60647795344581 32.71517408093362 28.641509051611276 20.03683891400929 48 19.77478560850601 30.758840032828655 29.35988920595289 20.106485152712445 49 18.91908610909502 29.854932110915634 29.545256989821304 21.68072479016804 50 17.32148885100238 32.901448439119 29.812109806414387 19.964952903464233 51 16.556180143782687 34.411961234882206 27.626412456117805 21.405446165217302 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2330.0 1 2770.0 2 3210.0 3 31586.0 4 59962.0 5 39862.5 6 19763.0 7 18855.5 8 17948.0 9 21795.0 10 25642.0 11 29473.0 12 33304.0 13 33901.5 14 34499.0 15 31525.0 16 28551.0 17 24990.0 18 21429.0 19 19669.0 20 17909.0 21 16842.0 22 15775.0 23 16495.5 24 17216.0 25 17748.0 26 20360.5 27 22441.0 28 24862.0 29 27283.0 30 31429.0 31 35575.0 32 39484.0 33 43393.0 34 49213.0 35 55033.0 36 57991.0 37 60949.0 38 68123.5 39 75298.0 40 90447.5 41 105597.0 42 121467.5 43 137338.0 44 141620.0 45 145902.0 46 150632.0 47 155362.0 48 154979.0 49 154596.0 50 141898.5 51 129201.0 52 115046.0 53 100891.0 54 88801.5 55 76712.0 56 68538.5 57 60365.0 58 56259.5 59 52154.0 60 46268.0 61 40382.0 62 34810.0 63 29238.0 64 24884.0 65 20530.0 66 15833.5 67 11137.0 68 9364.0 69 7591.0 70 6470.0 71 5349.0 72 4233.5 73 3118.0 74 2468.0 75 1275.5 76 733.0 77 692.5 78 652.0 79 464.5 80 277.0 81 254.0 82 231.0 83 156.0 84 81.0 85 72.0 86 63.0 87 47.5 88 32.0 89 28.5 90 25.0 91 19.0 92 13.0 93 10.5 94 8.0 95 6.5 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1875191.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.548103243286842 #Duplication Level Percentage of deduplicated Percentage of total 1 75.34728670249562 18.496329730743966 2 8.192415305792956 4.022165134769777 3 3.5673366840810634 2.6271404767315945 4 2.1942943627419136 2.1546305825100323 5 1.4002789832447076 1.7187096525047902 6 0.9856741851693166 1.4517858997067412 7 0.682994428956667 1.1736352429632602 8 0.5129610319729312 1.0073776298123582 9 0.4105797679539643 0.9071059080004803 >10 4.946945360438619 29.630577493246562 >50 1.5721594450591327 26.422143195066262 >100 0.18112440249382666 5.978110425774849 >500 0.0030848427551545972 0.4982839129538904 >1k 0.0026441509329896548 1.2880628331709718 >5k 0.0 0.0 >10k+ 2.2034591108247123E-4 2.623941882044423 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 48510 2.5869364774041683 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4579 0.24418845866901023 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTT 2979 0.15886381707250088 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCT 2316 0.12350741871094732 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2210 0.11785466120517857 No Hit CGTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTC 2093 0.11161529678843382 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.332790099781835E-5 0.0 0.0 0.06996620610913769 0.0 2 5.332790099781835E-5 0.0 0.0 0.21971095211101163 0.0 3 5.332790099781835E-5 0.0 0.0 0.39553304170081877 0.0 4 5.332790099781835E-5 0.0 0.0 0.5772745283013837 0.0 5 5.332790099781835E-5 0.0 0.0 1.071837482155151 0.0 6 5.332790099781835E-5 0.0 0.0 1.8849279886688877 0.0 7 5.332790099781835E-5 0.0 0.0 2.479320773190571 0.0 8 5.332790099781835E-5 0.0 0.0 3.4589543145204944 0.0 9 5.332790099781835E-5 0.0 0.0 4.051960573616234 0.0 10 5.332790099781835E-5 0.0 0.0 4.7486362722517335 0.0 11 5.332790099781835E-5 0.0 0.0 5.338869480495587 0.0 12 5.332790099781835E-5 0.0 0.0 5.7858639466593 0.0 13 5.332790099781835E-5 0.0 0.0 5.9912830213028965 0.0 14 5.332790099781835E-5 0.0 0.0 6.104178187715278 0.0 15 5.332790099781835E-5 0.0 0.0 6.209554120086967 0.0 16 5.332790099781835E-5 0.0 0.0 6.398388217520242 0.0 17 5.332790099781835E-5 0.0 0.0 6.617405906918282 0.0 18 5.332790099781835E-5 0.0 0.0 6.917322022130012 0.0 19 5.332790099781835E-5 0.0 0.0 7.067120096032884 0.0 20 5.332790099781835E-5 0.0 0.0 7.237716051324905 0.0 21 5.332790099781835E-5 0.0 0.0 7.425750230243213 0.0 22 5.332790099781835E-5 0.0 0.0 7.626103154292016 0.0 23 5.332790099781835E-5 0.0 0.0 7.848747140957908 0.0 24 5.332790099781835E-5 0.0 0.0 8.022276130804809 0.0 25 5.332790099781835E-5 0.0 0.0 8.166581430904905 0.0 26 5.332790099781835E-5 0.0 0.0 8.302514250548343 0.0 27 5.332790099781835E-5 0.0 0.0 8.45807173775898 0.0 28 5.332790099781835E-5 0.0 0.0 8.608456418572828 0.0 29 5.332790099781835E-5 0.0 0.0 8.780385571389795 0.0 30 1.066558019956367E-4 0.0 0.0 9.002229639540719 0.0 31 1.066558019956367E-4 0.0 0.0 9.17917161505148 0.0 32 1.066558019956367E-4 0.0 0.0 9.33926197384693 5.332790099781835E-5 33 1.066558019956367E-4 0.0 0.0 9.497325872404465 5.332790099781835E-5 34 1.066558019956367E-4 0.0 0.0 9.671868092370325 5.332790099781835E-5 35 1.066558019956367E-4 0.0 0.0 9.885019712658604 5.332790099781835E-5 36 1.066558019956367E-4 0.0 0.0 10.05817540719852 5.332790099781835E-5 37 1.066558019956367E-4 0.0 0.0 10.240610156512057 5.332790099781835E-5 38 1.066558019956367E-4 0.0 0.0 10.45146867705743 5.332790099781835E-5 39 1.066558019956367E-4 0.0 0.0 10.775435675619176 5.332790099781835E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 125 0.0 45.000004 21 ACGCTTA 30 2.1662381E-6 44.999996 23 CGTTTTT 14760 0.0 43.246952 1 CGACGGT 335 0.0 42.313435 28 GACGGTC 335 0.0 42.313435 29 GTCAACG 70 0.0 41.785713 1 CTCACGA 345 0.0 41.739132 24 CCGGATA 100 0.0 40.5 20 TTGTACG 95 0.0 40.263157 1 CGGTCTA 360 0.0 40.0 31 ACGAACT 45 1.929402E-8 40.0 21 GCCGGAT 85 0.0 39.705883 19 TCGACAG 85 0.0 39.705883 1 CTATACG 40 3.4597724E-7 39.375004 1 TCCGTAC 40 3.4597724E-7 39.375004 13 CGGGTAT 120 0.0 39.374996 6 GGAACGC 120 0.0 39.374996 8 CGGGACC 430 0.0 39.244186 6 TACGGGA 580 0.0 39.181034 4 AAGGGAC 1795 0.0 38.73259 5 >>END_MODULE