##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547884_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1711308 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.444483401000873 31.0 31.0 33.0 30.0 34.0 2 31.837241455074132 31.0 31.0 34.0 30.0 34.0 3 31.887345235340455 33.0 31.0 34.0 30.0 34.0 4 35.654259782575664 37.0 35.0 37.0 33.0 37.0 5 35.57335967575679 37.0 35.0 37.0 33.0 37.0 6 35.612024837142116 37.0 35.0 37.0 33.0 37.0 7 35.972289032716496 37.0 35.0 37.0 35.0 37.0 8 35.99441888894343 37.0 35.0 37.0 35.0 37.0 9 37.77167348016839 39.0 38.0 39.0 35.0 39.0 10 37.27311623623567 39.0 37.0 39.0 34.0 39.0 11 36.95237268802577 39.0 37.0 39.0 33.0 39.0 12 35.99878397109112 37.0 35.0 39.0 32.0 39.0 13 35.576270314870264 37.0 35.0 39.0 31.0 39.0 14 36.47849072171696 38.0 35.0 41.0 31.0 41.0 15 36.799344127415985 38.0 35.0 41.0 32.0 41.0 16 36.99582015627812 38.0 35.0 41.0 32.0 41.0 17 36.91978416509477 38.0 35.0 41.0 32.0 41.0 18 36.85467840973104 38.0 35.0 40.0 32.0 41.0 19 36.73105192051928 38.0 35.0 40.0 32.0 41.0 20 36.556776454033994 37.0 35.0 40.0 32.0 41.0 21 36.42710546552696 37.0 35.0 40.0 31.0 41.0 22 36.31325278675726 37.0 35.0 40.0 31.0 41.0 23 36.260753178270654 37.0 35.0 40.0 31.0 41.0 24 36.25652717102941 37.0 35.0 40.0 31.0 41.0 25 36.18623006495616 37.0 35.0 40.0 31.0 41.0 26 36.05473006612486 36.0 35.0 40.0 31.0 41.0 27 35.97503546994463 36.0 35.0 40.0 31.0 41.0 28 35.959712687605034 36.0 35.0 40.0 31.0 41.0 29 35.98494426485472 36.0 35.0 40.0 31.0 41.0 30 35.916269309791105 36.0 35.0 40.0 31.0 41.0 31 35.70846218214372 36.0 35.0 40.0 30.0 41.0 32 35.484528208832074 36.0 34.0 40.0 30.0 41.0 33 35.32585309015093 36.0 34.0 40.0 29.0 41.0 34 35.2011706834772 36.0 34.0 40.0 29.0 41.0 35 35.0995875669371 36.0 34.0 40.0 28.0 41.0 36 34.904359121794556 36.0 34.0 40.0 27.0 41.0 37 34.761573603349014 36.0 34.0 40.0 26.0 41.0 38 34.64435916854242 35.0 34.0 40.0 26.0 41.0 39 34.55993836293642 36.0 34.0 40.0 25.0 41.0 40 34.323256246099476 36.0 34.0 40.0 23.0 41.0 41 34.29371919023343 36.0 34.0 40.0 23.0 41.0 42 34.20810982009083 35.0 34.0 40.0 23.0 41.0 43 34.10261332267482 35.0 33.0 40.0 23.0 41.0 44 33.89772676806279 35.0 33.0 40.0 23.0 41.0 45 33.75002571132724 35.0 33.0 40.0 23.0 41.0 46 33.69856215245882 35.0 33.0 40.0 23.0 41.0 47 33.6199807398785 35.0 33.0 40.0 23.0 41.0 48 33.53893396162468 35.0 33.0 39.0 23.0 41.0 49 33.44413980417318 35.0 33.0 39.0 22.0 41.0 50 33.322552690690394 35.0 33.0 39.0 21.0 41.0 51 32.95426714536483 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 3.0 13 7.0 14 21.0 15 52.0 16 163.0 17 429.0 18 892.0 19 1632.0 20 3026.0 21 4792.0 22 7486.0 23 10986.0 24 16168.0 25 22799.0 26 28527.0 27 32537.0 28 35290.0 29 40392.0 30 46536.0 31 54581.0 32 67909.0 33 89379.0 34 169364.0 35 285433.0 36 107405.0 37 130477.0 38 200062.0 39 354893.0 40 62.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.882810107823953 25.264008582908517 29.878256865508725 13.97492444375881 2 29.228812113307484 27.547934094856096 31.52436615734865 11.698887634487772 3 28.932489066842436 26.537245194903548 31.4107104039717 13.119555334282316 4 24.92695645669862 29.37951555184689 31.45944505606238 14.23408293539211 5 23.278977250150177 32.210332681200576 30.320257954734043 14.190432113915206 6 20.719648362539065 41.1215280942998 27.188326122474738 10.9704974206864 7 86.7529398565308 4.512630105159329 7.018783293247037 1.7156467450628408 8 87.25261612754687 3.7050606904192582 5.919740923317135 3.122582258716724 9 84.26758946957533 5.31125899019931 7.782351277502355 2.6388002627230165 10 50.889495052906895 24.160291426207323 13.087124001056502 11.863089519829277 11 44.44804792591398 21.86140659659161 20.387446327604383 13.303099149890027 12 40.681104745609794 21.419931420878065 23.042316169853702 14.856647663658443 13 20.716960360145574 41.720777323544326 23.440841742106038 14.12142057420406 14 13.860041558854396 43.38289776007592 27.592403004017978 15.164657677051704 15 12.446619778555352 25.477178859679263 48.01076135914751 14.06544000261788 16 15.021317027677075 20.511094437704962 46.19448982883268 18.27309870578528 17 15.263880026272304 21.794264971588984 27.659778368359174 35.28207663377954 18 20.521262098932514 25.239816561367096 33.18187024194359 21.057051097756805 19 25.85881676472032 27.613147370315573 25.40518714340142 21.122848721562686 20 28.642009503841503 26.08881627386771 25.32793629200588 19.941237930284906 21 20.36296213188976 29.566974501375554 28.96042091780089 21.109642448933798 22 20.89863426104477 25.040203166233084 27.00495761137095 27.0562049613512 23 18.18252471209157 31.123269452372103 25.20411287740138 25.490092958134948 24 19.65484880570885 25.85957641757065 36.6316875746505 17.853887202069995 25 16.5593803102656 27.407456752378884 33.93603021782169 22.09713271953383 26 15.258328716981397 35.58897638531462 26.90164482372548 22.2510500739785 27 16.624067672213304 34.09970618965142 29.08073824232692 20.195487895808352 28 13.575580783821497 30.601855422869523 37.59001886276462 18.232544930544357 29 14.060005562996258 25.978082262222813 37.03629036970551 22.925621805075416 30 17.687172618838922 30.224366391087987 32.56006516652759 19.528395823545498 31 27.372103677421013 27.823454340188906 24.736166721595414 20.068275260794664 32 27.39132873801794 28.47973596804316 25.41138123587338 18.717554058065527 33 25.696601663756613 28.378702138948686 25.89498792736316 20.029708269931536 34 17.127074728803933 28.592748938239055 29.642764481905072 24.637411851051944 35 18.10311177181431 26.743753900525213 31.491233606107144 23.661900721553337 36 28.152033415375843 23.698247188700105 28.98472980901159 19.16498958691247 37 19.931888356742327 29.56498771699776 31.60535683816122 18.897767088098693 38 19.565735682881165 31.08294941646974 26.48243332001019 22.868881580638902 39 20.125190789735104 29.036970551180737 29.24862152225082 21.589217136833348 40 22.556897998490044 25.740603094241365 27.944122273722787 23.7583766335458 41 16.572820322233053 23.08386333728353 30.57626096529672 29.7670553751867 42 22.918259015910635 24.718402531864513 26.0819793982147 26.28135905401015 43 22.091639845077566 25.733766218588354 27.627580774471927 24.547013161862154 44 19.327029383372253 30.10983411519142 27.28766534136462 23.27547116007171 45 17.839570667582922 34.65542146708833 23.239299997428866 24.265707867899874 46 22.90522804778567 29.611092801529594 27.59345483104152 19.89022431964322 47 21.13149707708957 26.343066239391156 28.812113307481763 23.713323376037508 48 22.427815448767845 23.48753117498428 31.610382233940353 22.474271142307522 49 21.046591262356046 21.65133336605684 31.802925014082795 25.49915035750432 50 18.860894707440156 28.385889623609543 29.681740516610688 23.071475152339612 51 17.359294761667684 30.839918939197386 26.67760566771148 25.12318063142345 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2047.0 1 2266.0 2 2485.0 3 7880.5 4 13276.0 5 10110.0 6 6944.0 7 7243.5 8 7543.0 9 8504.5 10 9466.0 11 10092.5 12 10719.0 13 10849.5 14 10980.0 15 10665.5 16 10351.0 17 9925.0 18 9499.0 19 9098.5 20 8698.0 21 9038.5 22 9379.0 23 9651.5 24 9924.0 25 10027.0 26 11504.5 27 12879.0 28 15525.0 29 18171.0 30 21687.0 31 25203.0 32 28551.0 33 31899.0 34 36307.0 35 40715.0 36 41780.5 37 42846.0 38 52914.0 39 62982.0 40 87392.5 41 111803.0 42 138092.5 43 164382.0 44 172872.5 45 181363.0 46 180235.5 47 179108.0 48 172712.0 49 166316.0 50 149860.5 51 133405.0 52 119758.5 53 106112.0 54 92368.0 55 78624.0 56 69595.0 57 60566.0 58 56867.5 59 53169.0 60 45788.0 61 38407.0 62 33381.0 63 28355.0 64 24671.0 65 20987.0 66 17036.0 67 13085.0 68 10097.0 69 7109.0 70 5870.0 71 4631.0 72 3875.5 73 3120.0 74 2514.5 75 1560.5 76 1212.0 77 1025.0 78 838.0 79 571.5 80 305.0 81 269.5 82 234.0 83 144.0 84 54.0 85 49.5 86 45.0 87 30.5 88 16.0 89 14.5 90 13.0 91 8.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1711308.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.287151408266567 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7762805502058 16.769226114523153 2 8.893605236447263 3.786390424672105 3 3.248090489254296 2.074277820975205 4 1.6324431991421862 1.3900026218213908 5 0.9660338674414222 1.0282054600869435 6 0.5542068681899273 0.7078491308796129 7 0.42503550538990365 0.6333456609986785 8 0.31551226991118203 0.537308596861216 9 0.2456933396671602 0.4707100189347755 >10 2.261348131856742 11.287802294348774 >50 1.4500012224645946 23.100608585659753 >100 1.2225861713461093 35.70808207744871 >500 0.006108765788967524 0.8774624588906429 >1k 0.002776711722257965 1.1145457813972355 >5k 2.776711722257965E-4 0.5141829525018323 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8699 0.5083246265429717 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4856 0.28375955701720557 No Hit GAGCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCT 2150 0.1256348944783756 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1792 0.10471522367686004 No Hit AAGCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTCT 1725 0.100800089755906 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12002515035282953 0.0 2 0.0 0.0 0.0 0.4065895794328081 0.0 3 0.0 0.0 0.0 0.6026384496537152 0.0 4 0.0 0.0 0.0 1.153854244823258 0.0 5 0.0 0.0 0.0 1.86155852716168 0.0 6 0.0 0.0 0.0 2.7686424652955517 0.0 7 0.0 0.0 0.0 3.1755242189015656 0.0 8 0.0 0.0 0.0 4.1113580956788605 0.0 9 0.0 0.0 0.0 4.448468656723395 0.0 10 0.0 0.0 0.0 5.120001776418973 0.0 11 0.0 0.0 0.0 5.949016775472328 0.0 12 0.0 0.0 0.0 6.6154660645541306 0.0 13 0.0 0.0 0.0 6.881052387997952 0.0 14 0.0 0.0 0.0 6.981501868746012 0.0 15 0.0 0.0 0.0 7.136587919883504 0.0 16 0.0 0.0 0.0 7.5199788699637935 0.0 17 0.0 0.0 0.0 7.9287889731129635 0.0 18 0.0 0.0 0.0 8.54305595486026 0.0 19 0.0 0.0 0.0 8.812382107721112 0.0 20 0.0 0.0 0.0 9.083519740455838 0.0 21 0.0 0.0 0.0 9.449263370474513 0.0 22 0.0 0.0 0.0 9.79174993630603 0.0 23 0.0 0.0 0.0 10.186477244306694 0.0 24 0.0 0.0 0.0 10.458900443403525 0.0 25 0.0 0.0 0.0 10.678556986819439 0.0 26 0.0 0.0 0.0 10.885124127275745 0.0 27 0.0 0.0 0.0 11.09589857582621 0.0 28 0.0 0.0 0.0 11.30421876132175 0.0 29 0.0 0.0 0.0 11.542749756326739 0.0 30 0.0 0.0 0.0 11.866069696395973 0.0 31 0.0 0.0 0.0 12.139778461854908 0.0 32 0.0 0.0 0.0 12.370888232860478 0.0 33 0.0 0.0 0.0 12.620989325124407 0.0 34 0.0 0.0 0.0 12.869337372349104 0.0 35 0.0 0.0 0.0 13.193066356260825 0.0 36 0.0 0.0 0.0 13.44398553620973 0.0 37 0.0 0.0 0.0 13.69946263326064 0.0 38 0.0 0.0 0.0 13.951375205398444 0.0 39 0.0 0.0 0.0 14.268676357499643 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTGC 30 2.1661253E-6 45.000004 18 GCGAAAC 30 2.1661253E-6 45.000004 43 CGTTGCA 30 2.1661253E-6 45.000004 19 ATTACGA 30 2.1661253E-6 45.000004 30 CCATGCG 60 0.0 45.000004 1 TGCGCAC 30 2.1661253E-6 45.000004 13 CGTAACA 30 2.1661253E-6 45.000004 19 ATCGCTA 30 2.1661253E-6 45.000004 10 AGCGTAT 25 3.891609E-5 45.0 14 TCGCATA 20 7.034256E-4 45.0 36 CGAACTA 20 7.034256E-4 45.0 39 CGAACGC 25 3.891609E-5 45.0 13 CGACGGT 255 0.0 45.0 28 CGACGAT 50 2.1827873E-11 45.0 36 CTATCGT 45 3.8562575E-10 45.0 13 CGTCTAG 20 7.034256E-4 45.0 39 ATCCGAT 20 7.034256E-4 45.0 44 GTAGCGA 35 1.2123928E-7 45.0 34 TGACCTA 20 7.034256E-4 45.0 31 CGTAGTC 20 7.034256E-4 45.0 18 >>END_MODULE