##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547882_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1769393 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.47354092618203 31.0 31.0 33.0 30.0 34.0 2 31.833470009206547 31.0 31.0 34.0 30.0 34.0 3 31.546413939695704 31.0 31.0 34.0 30.0 34.0 4 35.52062034833415 37.0 35.0 37.0 33.0 37.0 5 35.57038939342475 37.0 35.0 37.0 33.0 37.0 6 35.66205190141478 37.0 35.0 37.0 33.0 37.0 7 36.030833172732116 37.0 35.0 37.0 35.0 37.0 8 36.07254013099408 37.0 35.0 37.0 35.0 37.0 9 37.82460708276793 39.0 38.0 39.0 35.0 39.0 10 37.38687391664825 39.0 37.0 39.0 35.0 39.0 11 37.127609298782126 39.0 37.0 39.0 33.0 39.0 12 36.78884736177887 39.0 35.0 39.0 33.0 39.0 13 36.685015143611395 39.0 35.0 39.0 33.0 39.0 14 37.77666973928347 40.0 36.0 41.0 33.0 41.0 15 37.92616394435832 40.0 36.0 41.0 33.0 41.0 16 37.99932971363626 40.0 36.0 41.0 33.0 41.0 17 37.90874102022558 40.0 36.0 41.0 33.0 41.0 18 37.71956201929136 39.0 36.0 41.0 33.0 41.0 19 37.544936031735176 39.0 36.0 41.0 33.0 41.0 20 37.28517576366585 39.0 35.0 41.0 33.0 41.0 21 37.1878514270148 39.0 35.0 41.0 32.0 41.0 22 37.12379499636316 39.0 35.0 41.0 32.0 41.0 23 37.02448636340259 39.0 35.0 41.0 32.0 41.0 24 37.026953311107256 39.0 35.0 41.0 32.0 41.0 25 36.994890338099 39.0 35.0 41.0 32.0 41.0 26 36.89308706432093 38.0 35.0 41.0 32.0 41.0 27 36.83009710109625 38.0 35.0 41.0 32.0 41.0 28 36.73203183238546 38.0 35.0 41.0 32.0 41.0 29 36.70032152269168 38.0 35.0 41.0 31.0 41.0 30 36.56848930678487 38.0 35.0 40.0 31.0 41.0 31 36.3619619835729 38.0 35.0 40.0 31.0 41.0 32 36.07998336152568 38.0 35.0 40.0 30.0 41.0 33 35.83808515123548 38.0 35.0 41.0 29.0 41.0 34 35.5313539728031 38.0 35.0 40.0 27.0 41.0 35 35.287075850305726 38.0 35.0 40.0 25.0 41.0 36 35.12879332064725 38.0 35.0 40.0 24.0 41.0 37 34.98443929641408 38.0 34.0 40.0 24.0 41.0 38 34.817462259656274 38.0 34.0 40.0 23.0 41.0 39 34.685871369447035 38.0 34.0 40.0 23.0 41.0 40 34.47711220740672 38.0 34.0 40.0 21.0 41.0 41 34.324398254090525 38.0 34.0 40.0 21.0 41.0 42 34.174740716166504 38.0 33.0 40.0 20.0 41.0 43 34.04824818454691 37.0 33.0 40.0 18.0 41.0 44 33.79868406849128 37.0 33.0 40.0 18.0 41.0 45 33.64087006108875 37.0 33.0 40.0 18.0 41.0 46 33.57755682315913 37.0 33.0 40.0 18.0 41.0 47 33.462968373899976 36.0 33.0 40.0 17.0 41.0 48 33.331576421970695 36.0 33.0 40.0 17.0 41.0 49 33.18285310273071 36.0 33.0 40.0 15.0 41.0 50 33.099470835478606 36.0 32.0 40.0 15.0 41.0 51 32.78095143362724 35.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 1.0 12 1.0 13 10.0 14 11.0 15 57.0 16 104.0 17 273.0 18 636.0 19 1309.0 20 2317.0 21 4034.0 22 6430.0 23 10040.0 24 16616.0 25 27189.0 26 37606.0 27 41338.0 28 40519.0 29 40661.0 30 44251.0 31 50738.0 32 60828.0 33 77212.0 34 120940.0 35 177125.0 36 135393.0 37 167730.0 38 251315.0 39 454635.0 40 71.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.179780862702632 23.377678107690038 27.574428066574242 19.868112963033084 2 36.53524118158035 24.30731895062318 26.671632588124854 12.485807279671617 3 27.17824700335087 24.11030223359084 36.19179006585874 12.519660697199548 4 23.96991510648002 26.373055618508722 35.78119728064935 13.87583199436191 5 21.77786393412882 29.932016233815776 34.38597304273273 13.904146789322667 6 19.808601028714367 38.04570267882828 31.34792553152409 10.797770760933268 7 81.85349439044916 2.9017860927448 13.138630027359666 2.106089489446381 8 82.09515918735974 2.3100577429660905 12.841239905436497 2.7535431642376795 9 77.11576794979973 4.843525434993809 14.82672306265482 3.213983552551638 10 35.19172959314296 35.837939903684486 18.99832315375951 9.972007349413047 11 26.47631136779675 23.462226876674656 34.71574715170683 15.345714603821762 12 25.816932699518986 21.905873935298715 34.59282364064965 17.68436972453265 13 20.824881753234017 27.100819320524046 36.00285521644994 16.071443709792003 14 15.81830605184942 30.474066530160343 36.376542690063765 17.33108472792647 15 15.029447951924757 26.921605318886193 42.365093565985624 15.683853163203427 16 19.249313182543393 25.59442701536629 39.44233983066509 15.713919971425227 17 17.954405832960795 25.836374395060908 34.62464246213249 21.584577309845805 18 20.028450434697096 26.705825104993636 35.491097794554406 17.774626665754866 19 21.342403863923955 29.15655255785459 31.766487151243396 17.734556426978067 20 21.906100001525946 29.07115604051785 31.531999957047418 17.490744000908787 21 19.991658156215152 28.81796186601846 34.36319687033915 16.82718310742724 22 19.52036658899408 24.853155856273876 34.16064153073964 21.465836023992406 23 16.398561540596127 29.828590934857317 33.626220969564145 20.146626554982415 24 17.17340353443243 28.465298551537167 36.9376390660526 17.423658847977812 25 18.990071736465556 28.7037984212665 33.71167400345768 18.59445583881026 26 17.243710131101455 31.175323967032764 32.0040827560638 19.57688314580198 27 17.66374118129777 29.081781153197735 34.12695766288213 19.12752000262237 28 16.269647274517308 29.287840519319335 36.41649989572695 18.026012310436403 29 17.10106234171832 27.940259738791777 35.40140601890027 19.557271900589637 30 18.95797033219867 27.292184381875593 35.8380529367981 17.91179234912764 31 21.412823493706597 27.707863657197695 32.402524481559496 18.476788367536212 32 21.196930246700422 28.513563691051115 32.52663484030964 17.762871221938823 33 20.553771830226523 27.728322650762156 32.01352102105072 19.7043844979606 34 16.993511334112885 29.30609536716829 33.82662868000495 19.873764618713878 35 17.826113249006863 28.75986284561994 33.68109854622461 19.732925359148588 36 20.738072321977086 28.787273375671766 30.261790342789872 20.212863959561272 37 18.38986590316566 29.768683384640948 31.401107611480324 20.44034310071307 38 18.303112988465536 30.142540407925207 29.912404988603434 21.641941615005823 39 17.86443147452262 28.562676578917177 29.68701696005353 23.88587498650667 40 20.145326674175834 27.218882407695748 31.03013293259327 21.605657985535153 41 17.47497588155938 27.223516765353995 31.38601769081261 23.915489662274013 42 19.652276232583716 29.025886278514722 29.87035667033836 21.4514808185632 43 19.641538086790217 28.48666181001055 30.78434242703571 21.08745767616352 44 20.210885880072997 30.0902625928779 29.736977596271714 19.96187393077739 45 18.748746038895824 30.49147362965718 28.755624103859347 22.004156227587654 46 20.265424357392618 29.22719825386446 29.637169356948966 20.870208031793954 47 19.56721881458783 29.075055682937595 30.621970359326617 20.735755143147962 48 19.681382259339784 28.55719447290681 30.46847139103636 21.29295187671704 49 20.14267039600586 27.09607192975218 30.47050598708145 22.290751687160512 50 17.6432256711765 28.980107867500323 32.09710900856961 21.279557452753572 51 17.33142382726732 29.760714550131034 30.26026439575606 22.64759722684559 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1373.0 1 1887.5 2 2402.0 3 29548.0 4 56694.0 5 38922.0 6 21150.0 7 18832.5 8 16515.0 9 17748.5 10 18982.0 11 20176.5 12 21371.0 13 22079.0 14 22787.0 15 21883.0 16 20979.0 17 19510.5 18 18042.0 19 17129.0 20 16216.0 21 16331.5 22 16447.0 23 16575.5 24 16704.0 25 17554.5 26 21138.5 27 23872.0 28 26770.5 29 29669.0 30 33169.5 31 36670.0 32 41284.5 33 45899.0 34 50821.0 35 55743.0 36 59030.5 37 62318.0 38 66895.0 39 71472.0 40 82986.5 41 94501.0 42 105177.0 43 115853.0 44 121431.5 45 127010.0 46 140443.0 47 153876.0 48 155602.0 49 157328.0 50 147571.5 51 137815.0 52 121207.0 53 104599.0 54 90429.0 55 76259.0 56 67854.5 57 59450.0 58 53258.5 59 47067.0 60 40501.5 61 33936.0 62 28843.0 63 23750.0 64 19689.5 65 15629.0 66 12749.5 67 9870.0 68 8099.0 69 6328.0 70 5456.5 71 4585.0 72 3991.0 73 3397.0 74 2828.0 75 1660.5 76 1062.0 77 801.0 78 540.0 79 416.5 80 293.0 81 201.0 82 109.0 83 96.5 84 84.0 85 69.0 86 54.0 87 35.0 88 16.0 89 11.0 90 6.0 91 5.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1769393.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.968108905028323 #Duplication Level Percentage of deduplicated Percentage of total 1 73.8365595356974 22.127420573383873 2 8.720031349116468 5.226456982511667 3 3.639293951796013 3.2718827245450144 4 2.0955637738357855 2.5120033356697187 5 1.4128657397826576 2.1170457178995044 6 1.0684680829620443 1.9211980723052031 7 0.7919172456995104 1.66125835840251 8 0.6628618432280199 1.5891772725476088 9 0.568446070598719 1.5331728375304043 >10 6.721840444388382 43.900628560798694 >50 0.4395394875082136 8.0679390090121 >100 0.038790744164345116 2.0192277364167386 >500 0.0015286924890068952 0.3270978441690022 >1k 0.0021019521723844815 1.3393717572249286 >5k 0.0 0.0 >10k+ 1.910865611258619E-4 2.3861192175829804 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 41668 2.354931889071563 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4308 0.24347332672843172 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTT 4194 0.23703043925233117 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTC 3205 0.1811355645693184 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCT 2746 0.15519446499449246 No Hit CGCTGTCTCTTATACACATCTGACGCTTAGCTCCTCGTATGCCGTCTTCTG 1819 0.10280361683356948 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08601819946162328 0.0 2 0.0 0.0 0.0 0.2814524529033403 0.0 3 0.0 0.0 0.0 0.5443109586168816 0.0 4 0.0 0.0 0.0 0.8077911464553098 0.0 5 0.0 0.0 0.0 1.5129482257474738 0.0 6 0.0 0.0 0.0 2.865672012944552 0.0 7 0.0 0.0 0.0 3.7862136902316217 0.0 8 0.0 0.0 0.0 5.320186075111635 0.0 9 0.0 0.0 0.0 6.330758627393688 0.0 10 0.0 0.0 0.0 7.437748425590018 0.0 11 0.0 0.0 0.0 8.249891346919537 0.0 12 0.0 0.0 0.0 8.81596117990746 0.0 13 0.0 0.0 0.0 9.15794286515206 0.0 14 0.0 0.0 0.0 9.374796893623971 0.0 15 0.0 0.0 0.0 9.54355533225236 0.0 16 0.0 0.0 0.0 9.78250733443616 0.0 17 0.0 0.0 0.0 10.074923999360232 0.0 18 0.0 0.0 0.0 10.470596413572338 0.0 19 0.0 0.0 0.0 10.687902574498713 0.0 20 0.0 0.0 0.0 10.917303278581977 0.0 21 0.0 0.0 0.0 11.155746631754505 0.0 22 0.0 0.0 0.0 11.420809283183555 0.0 23 0.0 0.0 0.0 11.70994798781277 0.0 24 0.0 0.0 0.0 11.928554029545726 0.0 25 0.0 0.0 0.0 12.114323951773292 0.0 26 0.0 0.0 0.0 12.30354138396614 0.0 27 0.0 0.0 0.0 12.529098962186467 0.0 28 0.0 0.0 0.0 12.742561997249904 0.0 29 0.0 0.0 0.0 12.982361747785822 0.0 30 0.0 0.0 0.0 13.300154346716642 0.0 31 0.0 0.0 0.0 13.529272468015868 0.0 32 0.0 0.0 0.0 13.779414748447632 0.0 33 0.0 0.0 0.0 14.025035704334764 0.0 34 0.0 0.0 0.0 14.270713176778703 0.0 35 0.0 0.0 0.0 14.523511735380438 0.0 36 0.0 0.0 0.0 14.750934359975426 0.0 37 0.0 0.0 0.0 14.995877117180864 0.0 38 0.0 0.0 0.0 15.278855517118018 0.0 39 0.0 0.0 0.0 15.735509296125846 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 20 7.034319E-4 45.000004 1 CGTTTTT 16350 0.0 43.98165 1 CGGTCTA 155 0.0 42.096775 31 CGACGGT 150 0.0 42.000004 28 CGGTTTT 1430 0.0 41.223778 1 ATAGCGG 265 0.0 40.75472 2 TCACGAC 155 0.0 40.645164 25 CACGACC 515 0.0 40.194176 27 CCGCTCG 45 1.929402E-8 40.000004 19 AGGGCGC 225 0.0 40.0 6 CACGTGA 445 0.0 39.94382 43 TTCGTAG 130 0.0 39.807693 1 TACGGGA 840 0.0 39.642857 4 GCGAGAC 540 0.0 39.583336 21 CGTTAGG 195 0.0 39.23077 2 CGGGAGT 340 0.0 39.04412 6 GTAGCCG 110 0.0 38.863636 43 ACGACCA 540 0.0 38.750004 28 ACACGAC 535 0.0 38.69159 26 TATCGTG 35 6.2501986E-6 38.57143 1 >>END_MODULE