##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547879_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1182841 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.510120971457702 31.0 31.0 33.0 30.0 34.0 2 31.872880632308146 31.0 31.0 34.0 30.0 34.0 3 31.588275178151587 31.0 31.0 34.0 30.0 34.0 4 35.563350441859896 37.0 35.0 37.0 33.0 37.0 5 35.598539448666386 37.0 35.0 37.0 33.0 37.0 6 35.70790410545458 37.0 35.0 37.0 33.0 37.0 7 36.059729921434915 37.0 35.0 37.0 35.0 37.0 8 36.11268970216623 37.0 35.0 37.0 35.0 37.0 9 37.88026201323762 39.0 38.0 39.0 35.0 39.0 10 37.462118746306565 39.0 37.0 39.0 35.0 39.0 11 37.164477727775754 39.0 37.0 39.0 33.0 39.0 12 36.81475870383255 39.0 35.0 39.0 33.0 39.0 13 36.71776341875197 39.0 35.0 39.0 33.0 39.0 14 37.80779242518648 40.0 36.0 41.0 33.0 41.0 15 37.95019026225841 40.0 36.0 41.0 33.0 41.0 16 38.022843306919526 40.0 36.0 41.0 33.0 41.0 17 37.95940451844331 40.0 36.0 41.0 33.0 41.0 18 37.75849924038818 39.0 36.0 41.0 33.0 41.0 19 37.56336312319238 39.0 36.0 41.0 33.0 41.0 20 37.30486853262611 39.0 35.0 41.0 33.0 41.0 21 37.20413394530626 39.0 35.0 41.0 33.0 41.0 22 37.137676999698186 39.0 35.0 41.0 32.0 41.0 23 37.03951503202882 39.0 35.0 41.0 32.0 41.0 24 37.03727466328949 39.0 35.0 41.0 32.0 41.0 25 36.98364530820288 39.0 35.0 41.0 32.0 41.0 26 36.896232883371475 38.0 35.0 41.0 32.0 41.0 27 36.82428661164096 38.0 35.0 41.0 32.0 41.0 28 36.74263996598021 38.0 35.0 41.0 32.0 41.0 29 36.71395394647294 38.0 35.0 41.0 32.0 41.0 30 36.57289948522244 38.0 35.0 41.0 31.0 41.0 31 36.342015537168564 38.0 35.0 41.0 31.0 41.0 32 36.054260040022285 38.0 35.0 41.0 30.0 41.0 33 35.741608550937954 38.0 35.0 41.0 29.0 41.0 34 35.41176793837887 38.0 35.0 41.0 25.0 41.0 35 35.15038792196077 38.0 34.0 41.0 24.0 41.0 36 34.96783084116969 38.0 34.0 40.0 23.0 41.0 37 34.82190505739994 38.0 34.0 40.0 23.0 41.0 38 34.668275786855546 38.0 34.0 40.0 22.0 41.0 39 34.564971961573875 38.0 34.0 40.0 21.0 41.0 40 34.430359617226664 38.0 34.0 40.0 21.0 41.0 41 34.332244147776414 38.0 34.0 40.0 20.0 41.0 42 34.255730060084154 38.0 34.0 40.0 19.0 41.0 43 34.19492391623219 38.0 33.0 40.0 19.0 41.0 44 33.93817089532744 37.0 33.0 40.0 18.0 41.0 45 33.82391885299884 37.0 33.0 40.0 18.0 41.0 46 33.82666224792681 37.0 33.0 40.0 18.0 41.0 47 33.776342720619255 37.0 33.0 40.0 18.0 41.0 48 33.68021568410293 37.0 33.0 40.0 18.0 41.0 49 33.54864516870822 37.0 33.0 40.0 18.0 41.0 50 33.482922894962215 36.0 33.0 40.0 18.0 41.0 51 33.1636661224966 36.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 2.0 13 6.0 14 10.0 15 32.0 16 76.0 17 205.0 18 428.0 19 962.0 20 1730.0 21 2854.0 22 4343.0 23 7068.0 24 11527.0 25 18762.0 26 25806.0 27 28666.0 28 27772.0 29 26877.0 30 28340.0 31 31901.0 32 38056.0 33 48796.0 34 79570.0 35 115417.0 36 83363.0 37 106914.0 38 170059.0 39 323249.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.796904233113324 23.845470354849045 27.686138711796428 18.6714867002412 2 35.94912587575168 24.69630322249567 27.26224403787153 12.092326863881112 3 27.269683752930447 23.992911980562052 36.1710491942704 12.566355072237098 4 23.503919799871664 26.235309733091768 36.52545016616773 13.735320300868839 5 21.91241257278028 30.254784878102804 34.79157384635805 13.041228702758866 6 20.434191915904165 38.24047357168039 31.38088720292922 9.944447309486229 7 83.0579934243064 2.775182801407797 12.726731657086624 1.440092117199184 8 83.75225410684952 2.1994503065078064 12.348912491197042 1.6993830954456262 9 79.11029462117055 4.891274482369144 13.746818042323525 2.2516128541367775 10 38.660310219209514 35.11444057147157 17.915002946296248 8.310246263022671 11 26.734531521988163 23.492168431767247 34.15590091990386 15.617399126340734 12 26.940983614873005 21.865068931496285 34.68598061785143 16.507966835779282 13 22.65308693222504 25.866367499942932 35.16525044363528 16.315295124196744 14 17.331746194120765 29.03965959921917 36.223465368549114 17.405128838110954 15 16.205982038160666 26.21561139662896 41.70416818490397 15.8742383803064 16 20.9687523513304 24.876293601591424 38.57551437598122 15.579439671096962 17 20.33181129162753 24.259219962784517 34.283982378020376 21.124986367567576 18 21.009501699721262 25.230694573488744 36.35628119079403 17.403522535995965 19 22.73771369102018 26.60492830397323 33.11882154913467 17.538536455871924 20 23.725843118390383 27.37088078617498 32.39801461058587 16.505261484848766 21 21.961531600612425 26.04339890145844 35.61323964928506 16.38182984864407 22 21.080432619430674 23.65212230553388 35.392246295148716 19.87519877988673 23 18.59159430557446 26.972179692790494 34.92785589948269 19.508370102152362 24 18.798891820625087 26.41479285888805 37.33578731207322 17.45052800841364 25 19.61928949030343 27.152085529669666 34.679978120474345 18.54864685955255 26 18.11688975948585 29.713630149783445 32.86739299703003 19.302087093700678 27 17.472001731424598 28.502731981728736 35.72677984615007 18.298486440696593 28 16.76277707654706 27.85327867397224 37.28125758238005 18.102686667100652 29 18.081804739605744 26.64559311014752 36.55766075068416 18.71494139956258 30 19.399733353848912 27.486788165104187 35.28081965369817 17.83265882734873 31 22.054274412199103 27.01656435649424 32.819457560229985 18.109703671076673 32 23.022705503106504 27.723759998173886 32.245923162961034 17.00761133575857 33 22.05275265230069 28.213005805514012 31.62758139090546 18.106660151279844 34 19.089209792355863 28.82137159601333 33.118229753618614 18.97118885801219 35 19.39745071400129 28.961035337801107 32.294788564143445 19.346725384054153 36 22.641251021904043 29.035009777307348 30.46005337995555 17.863685820833062 37 20.375604159815225 30.32216502471592 30.91598955396372 18.38624126150514 38 20.38718644348649 30.537071339258613 29.59205844234348 19.48368377491142 39 19.62233301010026 30.065410312966833 29.92574657117905 20.386510105753857 40 21.231932271539456 28.628361715564477 30.234917457206844 19.904788555689226 41 18.883095868337332 27.943485219061564 31.061063997612525 22.112354914988575 42 20.596428429518422 28.872942348126244 29.860310895547247 20.670318326808083 43 20.153596299079926 28.661333180030113 30.469014854912874 20.716055665977084 44 20.20499796675969 30.00859794342604 29.930734561957184 19.855669527857085 45 19.017348908264086 30.47510189450653 29.068826663938772 21.438722533290612 46 20.453974794583548 29.807556552402225 29.854562024819902 19.88390662819432 47 19.791501985473957 28.967037835178182 30.879382774185203 20.362077405162655 48 20.37222247115208 28.293912706779693 31.05117255827284 20.282692263795386 49 20.82604508974579 26.905729510559745 31.379872696330274 20.888352703364188 50 19.074583988887774 28.934319997362284 31.354510031356707 20.63658598239324 51 18.346675504146372 29.86605976627459 30.181402234112614 21.605862495466425 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 636.0 1 1125.0 2 1614.0 3 19556.0 4 37498.0 5 26569.0 6 15640.0 7 13914.0 8 12188.0 9 12402.5 10 12617.0 11 12785.0 12 12953.0 13 12712.5 14 12472.0 15 11962.0 16 11452.0 17 10972.0 18 10492.0 19 9990.5 20 9489.0 21 9375.5 22 9262.0 23 9798.0 24 10334.0 25 11175.0 26 13494.5 27 14973.0 28 18065.0 29 21157.0 30 23359.5 31 25562.0 32 29697.5 33 33833.0 34 36981.5 35 40130.0 36 43158.5 37 46187.0 38 49904.0 39 53621.0 40 59855.0 41 66089.0 42 72386.0 43 78683.0 44 82849.5 45 87016.0 46 88113.0 47 89210.0 48 89732.0 49 90254.0 50 85603.5 51 80953.0 52 73227.0 53 65501.0 54 59272.5 55 53044.0 56 48585.5 57 44127.0 58 40865.5 59 37604.0 60 33201.0 61 28798.0 62 25123.5 63 21449.0 64 17628.0 65 13807.0 66 11286.0 67 8765.0 68 7083.0 69 5401.0 70 4392.0 71 3383.0 72 2700.0 73 2017.0 74 1639.0 75 1008.0 76 755.0 77 514.0 78 273.0 79 231.5 80 190.0 81 130.5 82 71.0 83 47.5 84 24.0 85 20.0 86 16.0 87 12.0 88 8.0 89 7.0 90 6.0 91 6.0 92 6.0 93 4.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1182841.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.02826910287851 #Duplication Level Percentage of deduplicated Percentage of total 1 72.1219580598052 23.09941480965958 2 7.58132039997959 4.856331398513777 3 3.494775828570433 3.3579486207506712 4 2.168379135617004 2.7779772189043404 5 1.6236654377611868 2.6001596786829166 6 1.3146148126279507 2.526290219128693 7 1.124041942258824 2.520078246671148 8 0.9847309506561902 2.5231382305239873 9 0.8938924116476827 2.576684403834573 >10 8.626501161476929 48.36545180522093 >50 0.04612529187943078 0.965533306292642 >100 0.01732862538843679 1.0729544321079343 >500 0.002132753864949064 0.44118697355208575 >1k 2.66594233118633E-4 0.21491534980270943 >5k 0.0 0.0 >10k+ 2.66594233118633E-4 2.1019353063541115 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24617 2.0811757455144013 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2517 0.21279275912823448 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.058587756088941796 0.0 2 0.0 0.0 0.0 0.17787682368128938 0.0 3 0.0 0.0 0.0 0.30764912612937834 0.0 4 0.0 0.0 0.0 0.4365760064116817 0.0 5 0.0 0.0 0.0 0.7645152645199144 0.0 6 0.0 0.0 0.0 1.284027185395163 0.0 7 0.0 0.0 0.0 1.6114591902039244 0.0 8 0.0 0.0 0.0 2.2329290242729156 0.0 9 0.0 0.0 0.0 2.636618108435538 0.0 10 0.0 0.0 0.0 3.1553691493615794 0.0 11 0.0 0.0 0.0 3.643431365669604 0.0 12 0.0 0.0 0.0 4.002482159478746 0.0 13 0.0 0.0 0.0 4.189151373684206 0.0 14 0.0 0.0 0.0 4.31511927638626 0.0 15 0.0 0.0 0.0 4.428744015467844 0.0 16 0.0 0.0 0.0 4.6169349895717176 0.0 17 0.0 0.0 0.0 4.834884823911244 0.0 18 0.0 0.0 0.0 5.1239346623933395 0.0 19 0.0 0.0 0.0 5.2778860387828965 0.0 20 0.0 0.0 0.0 5.456523742413393 0.0 21 0.0 0.0 0.0 5.648265489613566 0.0 22 0.0 0.0 0.0 5.878220318707248 0.0 23 0.0 0.0 0.0 6.1156994050764215 0.0 24 0.0 0.0 0.0 6.3048203435626595 0.0 25 0.0 0.0 0.0 6.4635906262971945 0.0 26 0.0 0.0 0.0 6.628532490841964 0.0 27 0.0 0.0 0.0 6.8207814913416085 0.0 28 0.0 0.0 0.0 7.004069016883926 0.0 29 0.0 0.0 0.0 7.214494593947961 0.0 30 0.0 0.0 0.0 7.47750542972386 0.0 31 0.0 0.0 0.0 7.6846338603413304 0.0 32 0.0 0.0 0.0 7.887366095696716 0.0 33 0.0 0.0 0.0 8.08553305135686 0.0 34 0.0 0.0 0.0 8.312951613953185 0.0 35 0.0 0.0 0.0 8.562520237293093 0.0 36 0.0 0.0 0.0 8.775059369771592 0.0 37 0.0 0.0 0.0 8.99529184395874 0.0 38 0.0 0.0 0.0 9.25711908870254 0.0 39 0.0 0.0 0.0 9.65387571110572 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 11005 0.0 43.87551 1 CGGTCTA 80 0.0 42.1875 31 TCGATTG 45 1.9283107E-8 40.000004 1 CGAGGGA 790 0.0 39.588608 4 TAGCGCG 40 3.4583354E-7 39.375 1 CGTTATG 40 3.4583354E-7 39.375 31 CGGGATT 610 0.0 39.098362 6 ACATACG 75 0.0 39.0 17 ACGTAGG 185 0.0 38.91892 2 CGGTTTT 1065 0.0 38.873238 1 TAGGGAC 1265 0.0 38.596836 5 TTTAGCG 70 0.0 38.57143 1 CACGAGG 105 0.0 38.57143 2 TACGGGA 490 0.0 38.57143 4 ATGGGAC 1080 0.0 38.541664 5 ACGGGAT 655 0.0 38.47328 5 GACCGAT 440 0.0 38.352272 9 TAGGGAT 2060 0.0 38.228153 5 AGGGATT 2095 0.0 38.019093 6 GCGCGAC 160 0.0 37.96875 9 >>END_MODULE