##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547876_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2209547 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46291796463257 31.0 31.0 33.0 30.0 34.0 2 31.831412502200678 31.0 31.0 34.0 30.0 34.0 3 31.619973686914104 31.0 31.0 34.0 30.0 34.0 4 35.57453179316846 37.0 35.0 37.0 33.0 37.0 5 35.61896216735828 37.0 35.0 37.0 33.0 37.0 6 35.70389586643778 37.0 35.0 37.0 33.0 37.0 7 35.985959112886036 37.0 35.0 37.0 35.0 37.0 8 36.01605170652627 37.0 35.0 37.0 35.0 37.0 9 37.827226123725815 39.0 38.0 39.0 35.0 39.0 10 37.35944245585181 39.0 37.0 39.0 34.0 39.0 11 37.13947112236128 39.0 37.0 39.0 33.0 39.0 12 36.73449535130957 39.0 35.0 39.0 33.0 39.0 13 36.6170495581221 39.0 35.0 39.0 33.0 39.0 14 37.65821138903133 40.0 36.0 41.0 33.0 41.0 15 37.805323444126785 40.0 36.0 41.0 33.0 41.0 16 37.864684933155985 40.0 36.0 41.0 33.0 41.0 17 37.783577357711785 40.0 36.0 41.0 33.0 41.0 18 37.6044569316697 39.0 36.0 41.0 33.0 41.0 19 37.43556937236456 39.0 36.0 41.0 33.0 41.0 20 37.199430471494836 39.0 35.0 41.0 32.0 41.0 21 37.11992277150022 39.0 35.0 41.0 32.0 41.0 22 37.06232680273377 39.0 35.0 41.0 32.0 41.0 23 36.96868226835637 39.0 35.0 41.0 32.0 41.0 24 36.970246389870866 39.0 35.0 41.0 32.0 41.0 25 36.917417009006826 39.0 35.0 41.0 32.0 41.0 26 36.830160209309874 39.0 35.0 41.0 32.0 41.0 27 36.77229676490249 38.0 35.0 41.0 31.0 41.0 28 36.67999775519598 38.0 35.0 41.0 31.0 41.0 29 36.63927176022958 38.0 35.0 41.0 31.0 41.0 30 36.488173820244604 38.0 35.0 41.0 31.0 41.0 31 36.27334516984703 38.0 35.0 41.0 30.0 41.0 32 36.02078706630816 38.0 35.0 41.0 30.0 41.0 33 35.76306138769621 38.0 35.0 41.0 28.0 41.0 34 35.43191839775302 38.0 35.0 41.0 25.0 41.0 35 35.20381055483318 38.0 34.0 41.0 24.0 41.0 36 35.05812096325627 38.0 34.0 40.0 23.0 41.0 37 34.94639987291513 38.0 34.0 40.0 23.0 41.0 38 34.79123910919297 38.0 34.0 40.0 23.0 41.0 39 34.67975743444244 38.0 34.0 40.0 22.0 41.0 40 34.54719451543687 38.0 34.0 40.0 22.0 41.0 41 34.44213451897606 38.0 34.0 40.0 21.0 41.0 42 34.384356612464 38.0 34.0 40.0 21.0 41.0 43 34.32898281865016 38.0 33.0 40.0 21.0 41.0 44 34.09998520058637 37.0 33.0 40.0 20.0 41.0 45 33.98895112889656 37.0 33.0 40.0 20.0 41.0 46 33.95621998536352 37.0 33.0 40.0 20.0 41.0 47 33.89114737093169 37.0 33.0 40.0 20.0 41.0 48 33.78771847804097 37.0 33.0 40.0 20.0 41.0 49 33.64488105480444 36.0 33.0 40.0 20.0 41.0 50 33.59505455190589 36.0 33.0 40.0 20.0 41.0 51 33.29867434365506 36.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 1.0 11 4.0 12 9.0 13 12.0 14 35.0 15 65.0 16 186.0 17 499.0 18 1005.0 19 1986.0 20 3477.0 21 5618.0 22 8778.0 23 13285.0 24 20830.0 25 33183.0 26 46925.0 27 52027.0 28 51449.0 29 50659.0 30 53508.0 31 60995.0 32 73312.0 33 94442.0 34 155130.0 35 201673.0 36 153376.0 37 205473.0 38 332774.0 39 588743.0 40 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.870852713248464 22.48017353783377 27.534920053748575 19.114053695169194 2 35.74945452619926 23.98803917726122 27.952562222030124 12.30994407450939 3 27.98116537009622 24.310412948898573 34.79052493565423 12.917896745350971 4 24.17319025121439 25.94880308045043 35.7488661703055 14.129140498029685 5 22.376079802783106 30.002213123323468 33.955014308362756 13.666692765530671 6 20.109642383710327 38.46842814386841 31.085195291161494 10.336734181259779 7 84.11158486332266 2.7185662943580744 11.691129448706002 1.478719393613261 8 85.04752331586519 2.02303911163691 11.338794784632325 1.590642787865567 9 81.08286449665927 3.748279624737559 12.598057429871371 2.5707984487317987 10 38.01982940394569 29.456897726094986 19.683808491061743 12.839464378897574 11 30.366722228583505 24.890169794985127 29.023415206827462 15.719692769603904 12 28.282946685451815 21.405428352508455 32.56635862464116 17.745266337398572 13 23.324871568697112 23.903994800744226 33.80412365068496 18.9670099798737 14 18.366434386777016 26.629892914701518 35.774165473737376 19.229507224784083 15 18.862282630783593 24.81282362402791 38.7316042609639 17.593289484224595 16 23.778584479081005 23.453359444266177 35.653145192204555 17.11491088444826 17 22.77534716392093 23.73110868426877 32.71915012443728 20.77439402737303 18 23.500473173913026 24.544759627199603 34.02787992289822 17.926887275989152 19 24.530005471709813 26.248095197793937 31.03871517555408 18.183184154942168 20 25.218879707016868 26.725749667239484 30.955349671222198 17.100020954521447 21 23.994103768781564 25.450420380286094 33.39729817921954 17.1581776717128 22 22.926147305307374 21.962013028009814 34.555227836294044 20.556611830388764 23 21.30576991573386 25.147733902017023 33.93813302002628 19.608363162222844 24 21.229193133253105 25.220373225824115 34.8305783945759 18.719855246346874 25 22.131278492831335 25.639508912912916 32.48118279448231 19.748029799773438 26 20.098689912457168 27.106959028253304 31.33529180415714 21.459059255132388 27 19.362611431211917 26.00202665976329 34.10472825425302 20.530633654771773 28 18.28741366442986 26.696241356259904 34.68634068431221 20.330004294998023 29 20.212106825516724 26.03366210358956 34.02638640409098 19.727844666802742 30 22.011978020834135 24.672885437603274 34.28567032065849 19.029466220904105 31 24.23768310880013 24.117794280909163 32.04647830528158 19.598044305009125 32 25.131893551031048 24.944886893105238 30.94403513480365 18.979184421060065 33 23.903677993724507 25.08926037780595 30.423159136239235 20.583902492230308 34 20.83187187237927 26.038504725176697 32.97503968007922 20.154583722364812 35 20.965066595098452 26.895196164643703 31.628066748523565 20.51167049173428 36 23.476350582268672 28.065390779195916 29.11221168864025 19.34604694989516 37 22.050764251676927 28.57757721379088 29.502246388060538 19.869412146471653 38 22.105209800922996 28.421527127506224 28.869809060409214 20.603454011161563 39 21.381305760864105 27.25400274354879 29.018708359677348 22.34598313590976 40 23.09206366734901 25.538266441039724 30.077432161433997 21.29223773017727 41 19.914670292145857 26.03615130160164 30.162562733447174 23.88661567280533 42 21.00973638487889 26.585992513397542 29.64155096044574 22.76272014127783 43 21.419639410250156 26.07760776303921 29.7007486149876 22.802004211723037 44 21.832710505818614 26.692303897586246 29.547866598900136 21.927118997695004 45 20.93447208862269 27.16072570531426 28.717786949089565 23.18701525697349 46 22.007814271432107 26.94995852090949 29.39643284347425 21.64579436418415 47 20.934924670079432 26.653517666743454 30.801290943347208 21.6102667198299 48 21.243856772451547 26.24881932812472 30.992189801801 21.515134097622727 49 21.944362351196876 25.594477057967087 30.80857750480076 21.652583086035282 50 20.16779910090168 26.487239239536432 31.221829632951913 22.12313202660998 51 19.770251549299473 26.96394328792282 30.545491903996613 22.7203132587811 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 786.0 1 1841.0 2 2896.0 3 31449.5 4 60003.0 5 42705.0 6 25407.0 7 22495.0 8 19583.0 9 19306.5 10 19030.0 11 18726.0 12 18422.0 13 17552.5 14 16683.0 15 15879.5 16 15076.0 17 14349.5 18 13623.0 19 13112.5 20 12602.0 21 12578.5 22 12555.0 23 13420.0 24 14285.0 25 15433.5 26 19811.5 27 23041.0 28 27026.5 29 31012.0 30 35979.0 31 40946.0 32 46484.5 33 52023.0 34 57316.5 35 62610.0 36 67375.5 37 72141.0 38 79749.5 39 87358.0 40 94886.5 41 102415.0 42 115409.0 43 128403.0 44 133211.0 45 138019.0 46 146408.0 47 154797.0 48 160495.0 49 166193.0 50 163983.5 51 161774.0 52 153365.0 53 144956.0 54 133544.0 55 122132.0 56 117421.0 57 112710.0 58 105476.5 59 98243.0 60 89936.0 61 81629.0 62 71214.0 63 60799.0 64 51926.5 65 43054.0 66 35583.0 67 28112.0 68 23088.0 69 18064.0 70 15207.0 71 12350.0 72 10357.0 73 8364.0 74 6859.5 75 4090.0 76 2825.0 77 2132.5 78 1440.0 79 1059.0 80 678.0 81 472.5 82 267.0 83 199.0 84 131.0 85 116.0 86 101.0 87 69.0 88 37.0 89 25.5 90 14.0 91 15.0 92 16.0 93 10.0 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2209547.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.883196126899882 #Duplication Level Percentage of deduplicated Percentage of total 1 72.22740917309862 17.972487881920607 2 6.878839019951173 3.4233500091763367 3 3.099448839679287 2.3137258008909596 4 1.9260175591114301 1.917018906688908 5 1.4034476650926795 1.746113175217042 6 1.1913787494163648 1.778718664988887 7 0.9718004650363553 1.69270510973985 8 0.8756705682361171 1.7431585993578536 9 0.7929229750130171 1.775741211069646 >10 10.14737163699005 54.60946628132211 >50 0.4471437905713881 6.673063029164047 >100 0.03410168382975102 1.6294834701761727 >500 0.003335905480360457 0.5976575303659878 >1k 9.266404112112381E-4 0.43177989635931663 >5k 0.0 0.0 >10k+ 1.8532808224224758E-4 1.6955304335622126 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36767 1.6640062420034514 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3830 0.17333869793220058 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.5258145674203805E-5 0.0 0.0 0.031001829786829607 0.0 2 4.5258145674203805E-5 0.0 0.0 0.09549468737257004 0.0 3 4.5258145674203805E-5 0.0 0.0 0.17361024680624582 0.0 4 4.5258145674203805E-5 0.0 0.0 0.2721824880846617 0.0 5 4.5258145674203805E-5 0.0 0.0 0.5676276630458642 0.0 6 4.5258145674203805E-5 0.0 0.0 0.9556257459108134 0.0 7 4.5258145674203805E-5 0.0 0.0 1.2321982741258728 0.0 8 4.5258145674203805E-5 0.0 0.0 1.7366003076648744 0.0 9 4.5258145674203805E-5 0.0 0.0 2.129214721388592 0.0 10 4.5258145674203805E-5 0.0 0.0 2.667877171202966 0.0 11 4.5258145674203805E-5 0.0 0.0 3.0481813693033004 0.0 12 4.5258145674203805E-5 0.0 0.0 3.336747306122024 0.0 13 4.5258145674203805E-5 0.0 0.0 3.4845151517482997 0.0 14 4.5258145674203805E-5 0.0 0.0 3.592772636200995 0.0 15 4.5258145674203805E-5 0.0 0.0 3.672245940004897 0.0 16 4.5258145674203805E-5 0.0 0.0 3.7784668079022534 0.0 17 4.5258145674203805E-5 0.0 0.0 3.8933772397690567 0.0 18 4.5258145674203805E-5 0.0 0.0 4.041778699434771 0.0 19 4.5258145674203805E-5 0.0 0.0 4.14134661991802 0.0 20 4.5258145674203805E-5 0.0 0.0 4.252500625693864 0.0 21 4.5258145674203805E-5 0.0 0.0 4.374199779411798 0.0 22 4.5258145674203805E-5 0.0 0.0 4.513006512194581 0.0 23 4.5258145674203805E-5 0.0 0.0 4.658104127226078 0.0 24 4.5258145674203805E-5 0.0 0.0 4.780165346109406 0.0 25 4.5258145674203805E-5 0.0 0.0 4.886386214006762 0.0 26 4.5258145674203805E-5 0.0 0.0 4.990932530514173 0.0 27 4.5258145674203805E-5 0.0 0.0 5.119737213102957 0.0 28 4.5258145674203805E-5 0.0 0.0 5.241979464568982 0.0 29 4.5258145674203805E-5 0.0 0.0 5.384678397879746 0.0 30 4.5258145674203805E-5 0.0 0.0 5.55901277501678 0.0 31 1.8103258269681522E-4 0.0 0.0 5.697547958925517 0.0 32 1.8103258269681522E-4 0.0 0.0 5.860432025206977 0.0 33 1.8103258269681522E-4 0.0 0.0 6.013992913479551 0.0 34 1.8103258269681522E-4 0.0 0.0 6.180316598832249 0.0 35 1.8103258269681522E-4 0.0 0.0 6.35623501106788 0.0 36 1.8103258269681522E-4 0.0 0.0 6.529528450854406 0.0 37 1.8103258269681522E-4 0.0 0.0 6.713186006000325 0.0 38 1.8103258269681522E-4 0.0 0.0 6.9433689348993255 0.0 39 1.8103258269681522E-4 0.0 0.0 7.326207589157415 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 18610 0.0 43.488716 1 GCGCGAC 440 0.0 41.420456 9 CACGACG 280 0.0 39.375 26 CGGTCTA 275 0.0 39.272728 31 CGGTTTT 1930 0.0 39.170982 1 TATAGCG 140 0.0 38.571426 1 TACGGGA 805 0.0 38.291924 4 GGGCGAT 2870 0.0 37.709057 7 CGCGACC 485 0.0 37.57732 10 TAGGGAC 1985 0.0 37.292194 5 CGGGTAT 230 0.0 37.173912 6 CGAGGGA 1405 0.0 37.153027 4 GACCGAT 945 0.0 36.904762 9 TCACGAC 305 0.0 36.885242 25 TCGATAG 55 2.752131E-9 36.81818 1 TATCGCG 55 2.752131E-9 36.81818 1 ACGGGAT 825 0.0 36.545452 5 AGGGCGA 1590 0.0 36.50943 6 AGGGAAC 2270 0.0 36.37665 6 TACGCGG 130 0.0 36.346157 2 >>END_MODULE