##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547871_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1871538 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45698137040231 31.0 31.0 33.0 30.0 34.0 2 31.8715014068643 31.0 31.0 34.0 30.0 34.0 3 31.966298306526504 33.0 31.0 34.0 30.0 34.0 4 35.72515546037537 37.0 35.0 37.0 35.0 37.0 5 35.59753956371711 37.0 35.0 37.0 33.0 37.0 6 35.648585815516434 37.0 35.0 37.0 33.0 37.0 7 35.98605852512746 37.0 35.0 37.0 35.0 37.0 8 36.01354126926624 37.0 35.0 37.0 35.0 37.0 9 37.7961115403481 39.0 38.0 39.0 35.0 39.0 10 37.28960672986602 39.0 37.0 39.0 34.0 39.0 11 37.014557545719086 39.0 37.0 39.0 33.0 39.0 12 36.283359461576524 38.0 35.0 39.0 32.0 39.0 13 36.002814262921724 38.0 35.0 39.0 32.0 39.0 14 36.99698910735449 39.0 35.0 41.0 32.0 41.0 15 37.24435304011995 39.0 35.0 41.0 32.0 41.0 16 37.366004323716645 39.0 35.0 41.0 33.0 41.0 17 37.29520479947509 39.0 35.0 41.0 33.0 41.0 18 37.22745891347117 39.0 35.0 41.0 32.0 41.0 19 37.15490949155187 39.0 35.0 41.0 32.0 41.0 20 37.00964126830446 38.0 35.0 41.0 32.0 41.0 21 36.8777128757204 38.0 35.0 41.0 32.0 41.0 22 36.770106190737245 38.0 35.0 41.0 31.0 41.0 23 36.701303419967964 38.0 35.0 41.0 31.0 41.0 24 36.724246047902845 38.0 35.0 41.0 32.0 41.0 25 36.68494094162128 38.0 35.0 41.0 32.0 41.0 26 36.57821855607527 38.0 35.0 41.0 31.0 41.0 27 36.476279936608286 38.0 35.0 40.0 31.0 41.0 28 36.42612225880532 38.0 35.0 40.0 31.0 41.0 29 36.456711538852005 38.0 35.0 40.0 31.0 41.0 30 36.36410000758734 38.0 35.0 40.0 31.0 41.0 31 36.20149951537185 38.0 35.0 40.0 30.0 41.0 32 36.07854075097593 38.0 35.0 40.0 30.0 41.0 33 35.96667927661635 38.0 35.0 40.0 30.0 41.0 34 35.86566663353883 38.0 35.0 40.0 30.0 41.0 35 35.78767783502125 38.0 35.0 40.0 30.0 41.0 36 35.67196872305024 38.0 35.0 40.0 29.0 41.0 37 35.54555451185068 38.0 34.0 40.0 29.0 41.0 38 35.48825351128323 38.0 34.0 40.0 29.0 41.0 39 35.422114325223426 37.0 34.0 40.0 28.0 41.0 40 35.26514983933001 37.0 34.0 40.0 27.0 41.0 41 35.21756651481295 37.0 34.0 40.0 27.0 41.0 42 35.1510458243434 37.0 34.0 40.0 27.0 41.0 43 35.084953658434934 37.0 34.0 40.0 27.0 41.0 44 34.87332557500836 37.0 34.0 40.0 26.0 41.0 45 34.71324653840852 36.0 34.0 40.0 26.0 41.0 46 34.69748356699142 36.0 34.0 40.0 26.0 41.0 47 34.61203405968781 36.0 34.0 40.0 26.0 41.0 48 34.550058294301266 36.0 34.0 40.0 25.0 41.0 49 34.42201173580232 36.0 34.0 40.0 24.0 41.0 50 34.30151832343238 36.0 34.0 40.0 24.0 41.0 51 33.951003399343215 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 3.0 13 12.0 14 25.0 15 46.0 16 119.0 17 311.0 18 613.0 19 1225.0 20 2338.0 21 3842.0 22 5797.0 23 8810.0 24 13159.0 25 18627.0 26 24498.0 27 29196.0 28 32930.0 29 38303.0 30 45703.0 31 55022.0 32 68575.0 33 89933.0 34 162864.0 35 262039.0 36 128279.0 37 162620.0 38 255538.0 39 461050.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.604006971806076 24.956052188093427 30.685724788916925 12.754216051183572 2 28.578473960988237 26.653639947465667 31.420735245557395 13.3471508459887 3 28.762066279177873 25.438703355208393 32.205490885036795 13.59373948057694 4 25.730709181432598 28.640348205593476 30.917031874319413 14.711910738654518 5 23.218337004111056 32.85249885388381 29.496008096015146 14.433156045989984 6 21.028480319395065 40.68701784307879 26.990635509404566 11.293866328121577 7 88.61316200900008 3.6867004570572437 5.9210125575863275 1.7791249763563444 8 89.32167019852122 2.686613897233185 5.368365483361813 2.6233504208837863 9 85.3551998409864 4.741661670775587 7.08112792793948 2.8220105602985353 10 46.69549856855698 27.966570809676323 12.69832618947625 12.639604432290447 11 38.32986559717195 23.239068616293125 22.730770093901377 15.700295692633546 12 36.563136842532714 21.820663005506702 25.250355589894514 16.365844562066066 13 22.158673775258638 34.80971265344332 25.924613873723107 17.106999697574935 14 15.761368457386386 37.762097269732166 28.079632900854808 18.396901372026644 15 14.805951041336057 26.343680972547713 42.3500885368077 16.500279449308536 16 17.680057792040557 22.822673116976517 40.771547251511855 18.725721839471067 17 17.90062504742089 23.963232378931128 26.92053273831469 31.21560983533329 18 21.220782051980777 25.674765887735113 31.843382287722715 21.26106977256139 19 25.295505621579682 27.804992471432588 25.449069161299427 21.450432745688307 20 27.807076319048825 25.781950459996004 25.813795926131345 20.59717729482383 21 22.424230766353663 29.300286716059198 28.11837109372078 20.15711142386636 22 22.218731332198438 24.569097715354964 27.04486897941693 26.167301973029666 23 19.514217718261666 29.744627146229462 26.66817344878918 24.072981686719693 24 20.11329719193519 25.39526314720834 35.299630571220035 19.19180908963644 25 18.15651084829696 27.428991556676912 31.899165285449723 22.5153323095764 26 17.33809305501678 33.20685981262469 26.58973528723435 22.865311845124168 27 18.318356346491495 33.131627570479466 28.148453304180837 20.4015627788482 28 15.85941615932992 29.17039354798032 35.64458749969276 19.32560279299699 29 16.700649412408406 26.07149841467285 34.00652297735873 23.221329195560013 30 19.29514655860581 29.763114614824815 30.614393082053372 20.327345744516006 31 26.199361167125645 27.848218951472 25.415193279538006 20.53722660186435 32 27.047647442905248 28.168062844569548 25.3046959238872 19.47959378863801 33 25.74502895479547 28.55800950875697 25.8162537976787 19.880707738768862 34 19.973999993588162 26.865604652430246 29.315942289176068 23.844453064805524 35 20.21583318105216 26.187819857251093 30.609584202938972 22.98676275875777 36 27.330035510900657 25.54433839975464 27.825670651624492 19.299955437720207 37 20.675562024388498 30.048013986357745 30.1732585712927 19.10316541796106 38 21.18594439439648 29.790311497816234 26.94992033290267 22.073823774884612 39 21.366491089147 28.670270120083053 28.972214296477016 20.99102449429293 40 23.68063058297507 25.61155584337588 27.556854309129708 23.15095926451934 41 18.17457086097103 24.49840719237333 29.451819840152858 27.875202106502776 42 21.695632148532383 26.19562092781445 26.50109161555897 25.607655308094195 43 21.948792917910296 26.39438793120952 27.017832392395984 24.6389867584842 44 20.53482216230715 29.687935804669742 27.566311771388026 22.210930261635085 45 19.102631098059458 32.335277189135354 24.356010938597024 24.206080774208164 46 22.960955107510507 29.94056225414605 26.853315294693452 20.24516734364998 47 21.422380950854325 26.585460728021555 28.75063183328364 23.241526487840485 48 22.65478980389391 23.962217171118088 30.876209833837198 22.50678319115081 49 21.617674874888994 23.460918239437298 30.6885566843954 24.232850201278307 50 19.598533398734087 28.346151667772705 29.710163512576287 22.345151420916913 51 18.605179269670185 29.38887695574442 26.907228172764857 25.098715601820537 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 941.0 1 1570.5 2 2200.0 3 7340.0 4 12480.0 5 9368.5 6 6257.0 7 6184.5 8 6112.0 9 6851.0 10 7590.0 11 7908.0 12 8226.0 13 8265.5 14 8305.0 15 7925.5 16 7546.0 17 6969.5 18 6393.0 19 6698.0 20 7003.0 21 6806.0 22 6609.0 23 8113.5 24 9618.0 25 10413.5 26 14457.5 27 17706.0 28 19962.0 29 22218.0 30 26000.0 31 29782.0 32 34848.5 33 39915.0 34 46379.5 35 52844.0 36 57019.5 37 61195.0 38 66914.0 39 72633.0 40 94430.0 41 116227.0 42 139144.0 43 162061.0 44 168309.0 45 174557.0 46 176386.0 47 178215.0 48 178240.5 49 178266.0 50 164863.0 51 151460.0 52 137452.5 53 123445.0 54 109158.0 55 94871.0 56 84306.0 57 73741.0 58 68887.0 59 64033.0 60 59260.0 61 54487.0 62 47538.5 63 40590.0 64 33136.5 65 25683.0 66 20314.5 67 14946.0 68 12223.0 69 9500.0 70 7526.5 71 5553.0 72 4572.0 73 3591.0 74 2651.5 75 1216.0 76 720.0 77 601.0 78 482.0 79 374.5 80 267.0 81 238.0 82 209.0 83 135.0 84 61.0 85 46.5 86 32.0 87 22.5 88 13.0 89 14.5 90 16.0 91 13.0 92 10.0 93 9.0 94 8.0 95 4.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1871538.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.820634980009626 #Duplication Level Percentage of deduplicated Percentage of total 1 77.57830226271716 15.376512115181715 2 9.217887683163697 3.6540877410942847 3 3.2676360391290524 1.9429986353730413 4 1.5761339705813049 1.249599044419411 5 0.9181686772322317 0.9099343100749169 6 0.5755946047481957 0.684519033430614 7 0.4312682575463027 0.5983607497903033 8 0.32123014655859844 0.5093588383610379 9 0.2521549656872701 0.44980843799558085 >10 2.743307145415783 13.573734863950374 >50 1.9268159061133956 28.572328608795992 >100 1.185224978651989 30.84011025638988 >500 0.0038197858421225683 0.5237549827203336 >1k 0.002182734766927182 0.6909131295028378 >5k 2.7284184586589774E-4 0.42397925291971256 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7840 0.4189068028541232 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3536 0.18893551720563515 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.343199015996469E-5 0.0 0.0 0.10152078130393291 0.0 2 5.343199015996469E-5 0.0 0.0 0.3909618720004617 0.0 3 5.343199015996469E-5 0.0 0.0 0.5754091020326598 0.0 4 5.343199015996469E-5 0.0 0.0 0.9933541290639036 0.0 5 5.343199015996469E-5 0.0 0.0 1.6621623498961817 0.0 6 5.343199015996469E-5 0.0 0.0 2.4371933671664694 0.0 7 5.343199015996469E-5 0.0 0.0 2.8330709822616478 0.0 8 5.343199015996469E-5 0.0 0.0 3.7525286689343202 0.0 9 5.343199015996469E-5 0.0 0.0 4.075738777411947 0.0 10 5.343199015996469E-5 0.0 0.0 4.6783981944261885 0.0 11 5.343199015996469E-5 0.0 0.0 5.41677486644674 0.0 12 5.343199015996469E-5 0.0 0.0 5.987909409266603 0.0 13 5.343199015996469E-5 0.0 0.0 6.216331167200452 0.0 14 5.343199015996469E-5 0.0 0.0 6.303906199072634 0.0 15 5.343199015996469E-5 0.0 0.0 6.442348485577103 0.0 16 5.343199015996469E-5 0.0 0.0 6.777580791840721 0.0 17 5.343199015996469E-5 0.0 0.0 7.158550881681269 0.0 18 5.343199015996469E-5 0.0 0.0 7.658834605549019 0.0 19 5.343199015996469E-5 0.0 0.0 7.895698617928143 0.0 20 5.343199015996469E-5 0.0 0.0 8.14244754848686 0.0 21 5.343199015996469E-5 0.0 0.0 8.461543393722168 0.0 22 5.343199015996469E-5 0.0 0.0 8.770166568886125 0.0 23 5.343199015996469E-5 0.0 0.0 9.105185147189104 0.0 24 5.343199015996469E-5 0.0 0.0 9.353911061383739 0.0 25 5.343199015996469E-5 0.0 0.0 9.569081685757917 0.0 26 5.343199015996469E-5 0.0 0.0 9.765230521635146 0.0 27 5.343199015996469E-5 0.0 0.0 9.965066164833415 0.0 28 5.343199015996469E-5 0.0 0.0 10.16971068714608 0.0 29 5.343199015996469E-5 0.0 0.0 10.39749126119801 0.0 30 1.0686398031992938E-4 0.0 0.0 10.69879425371005 0.0 31 1.602959704798941E-4 0.0 0.0 10.965045860677154 0.0 32 1.602959704798941E-4 0.0 0.0 11.18310181251997 0.0 33 1.602959704798941E-4 0.0 0.0 11.41125641050302 0.0 34 1.602959704798941E-4 0.0 0.0 11.643952727649665 0.0 35 1.602959704798941E-4 0.0 0.0 11.948728799522105 0.0 36 1.602959704798941E-4 0.0 0.0 12.188050683448585 0.0 37 1.602959704798941E-4 0.0 0.0 12.434959909977783 0.0 38 1.602959704798941E-4 0.0 0.0 12.69602861389937 0.0 39 1.602959704798941E-4 0.0 0.0 13.010636171961243 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATA 25 3.8917482E-5 45.000004 9 GACCGAC 25 3.8917482E-5 45.000004 9 GCGGATA 25 3.8917482E-5 45.000004 30 ACGTACG 45 3.8562575E-10 45.000004 1 AACCGGT 20 7.0344255E-4 45.0 37 ATCCGAC 20 7.0344255E-4 45.0 32 CCGTATT 20 7.0344255E-4 45.0 19 CGACTCC 20 7.0344255E-4 45.0 28 TAATGCG 75 0.0 45.0 1 GCGTAAG 140 0.0 45.0 1 AGTCGAC 20 7.0344255E-4 45.0 38 CGACGGT 305 0.0 42.786884 28 TATAGCG 85 0.0 42.352943 1 ATAACGG 125 0.0 41.4 2 CGGTCTA 310 0.0 41.370968 31 ACGCTAG 60 3.6379788E-12 41.250004 1 CGTTTTT 3775 0.0 41.125824 1 TACACGG 215 0.0 40.813953 2 CGCATCG 160 0.0 40.78125 21 TAAGGGA 2015 0.0 39.528534 4 >>END_MODULE