##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547870_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1199157 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.488987680512228 31.0 31.0 33.0 30.0 34.0 2 31.895693391274037 31.0 31.0 34.0 30.0 34.0 3 31.92392489056896 33.0 31.0 34.0 30.0 34.0 4 35.72434968898985 37.0 35.0 37.0 35.0 37.0 5 35.64877576497489 37.0 35.0 37.0 33.0 37.0 6 35.697314863691744 37.0 35.0 37.0 33.0 37.0 7 36.018341218039005 37.0 35.0 37.0 35.0 37.0 8 36.038326090745414 37.0 35.0 37.0 35.0 37.0 9 37.76298099414839 39.0 38.0 39.0 35.0 39.0 10 37.33152289483362 39.0 37.0 39.0 34.0 39.0 11 37.06716051359413 39.0 37.0 39.0 33.0 39.0 12 36.4722667674041 39.0 35.0 39.0 33.0 39.0 13 36.25581304199534 39.0 35.0 39.0 32.0 39.0 14 37.18929964967056 39.0 35.0 41.0 32.0 41.0 15 37.41650509482912 39.0 35.0 41.0 32.0 41.0 16 37.54666236364379 40.0 35.0 41.0 33.0 41.0 17 37.49262106629907 39.0 35.0 41.0 33.0 41.0 18 37.387349613103204 39.0 35.0 41.0 32.0 41.0 19 37.30957414250177 39.0 35.0 41.0 32.0 41.0 20 37.13504153334384 39.0 35.0 41.0 32.0 41.0 21 37.01577358094061 39.0 35.0 41.0 32.0 41.0 22 36.95061864292999 39.0 35.0 41.0 32.0 41.0 23 36.87449433226842 38.0 35.0 41.0 32.0 41.0 24 36.900979604839065 38.0 35.0 41.0 32.0 41.0 25 36.85902763357926 38.0 35.0 41.0 32.0 41.0 26 36.765262596974374 38.0 35.0 41.0 31.0 41.0 27 36.67697974493748 38.0 35.0 41.0 31.0 41.0 28 36.59305662227715 38.0 35.0 41.0 31.0 41.0 29 36.580444428877954 38.0 35.0 41.0 31.0 41.0 30 36.49910061818427 38.0 35.0 40.0 31.0 41.0 31 36.31294651159106 38.0 35.0 40.0 30.0 41.0 32 36.172301875400805 38.0 35.0 40.0 30.0 41.0 33 36.05660309700898 38.0 35.0 40.0 30.0 41.0 34 35.857705871708205 38.0 35.0 40.0 29.0 41.0 35 35.76242977358261 38.0 35.0 40.0 29.0 41.0 36 35.62187103106599 38.0 35.0 40.0 29.0 41.0 37 35.50075427988162 38.0 34.0 40.0 28.0 41.0 38 35.37684389950607 38.0 34.0 40.0 27.0 41.0 39 35.29367714152526 38.0 34.0 40.0 27.0 41.0 40 35.12167797878009 38.0 34.0 40.0 26.0 41.0 41 35.03540820759917 38.0 34.0 40.0 25.0 41.0 42 34.96441917113439 37.0 34.0 40.0 25.0 41.0 43 34.913791938837036 37.0 34.0 40.0 25.0 41.0 44 34.73361202911712 37.0 34.0 40.0 24.0 41.0 45 34.61046635261271 37.0 34.0 40.0 24.0 41.0 46 34.564261393629025 37.0 34.0 40.0 24.0 41.0 47 34.47744623931645 37.0 34.0 40.0 24.0 41.0 48 34.35688571221283 36.0 33.0 40.0 23.0 41.0 49 34.235724763312895 36.0 33.0 40.0 24.0 41.0 50 34.14539380581525 36.0 33.0 40.0 24.0 41.0 51 33.816723748433276 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 3.0 12 5.0 13 11.0 14 17.0 15 43.0 16 105.0 17 221.0 18 477.0 19 983.0 20 1540.0 21 2743.0 22 4250.0 23 6209.0 24 9129.0 25 13325.0 26 17582.0 27 20274.0 28 22084.0 29 24697.0 30 28458.0 31 34056.0 32 42923.0 33 56252.0 34 96347.0 35 139240.0 36 86062.0 37 111916.0 38 174173.0 39 305989.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.84690828640453 24.5914421547804 28.52920843559267 14.032441123222398 2 31.20166917259375 26.41005306227625 28.87186581907123 13.516411946058774 3 29.24237610254537 25.39225472561141 31.39889105429898 13.966478117544243 4 26.59785165745603 27.533925916289526 30.6203441250812 15.24787830117324 5 23.538619213330698 32.055018650602044 29.702532695885527 14.703829440181728 6 22.202930892285163 40.346927049585666 26.933754295726082 10.516387762403088 7 87.36295580978971 3.535150109618674 7.310969289259038 1.7909247913325779 8 87.25337883196279 3.25903947523135 7.038694683014818 2.448887009791045 9 81.81380753312536 5.86553720655427 9.091136523407693 3.2295187369126808 10 43.908679180457604 31.52172734679446 14.337905712096081 10.231687760651859 11 35.64754239853497 21.58733176723315 26.011439703058066 16.75368613117382 12 33.05638877978447 20.796609618256827 29.065168280717202 17.081833321241504 13 24.480947865875777 29.982562750332107 28.97402091636041 16.562468467431703 14 18.285178671349954 33.62612235095154 31.041890261241857 17.046808716456642 15 16.854340173972215 25.46397177350422 40.49736606632826 17.184321986195304 16 21.696074825898528 23.856759373459855 36.823285024396306 17.62388077624531 17 22.02897535518702 23.63251851092059 27.910440417726782 26.428065716165605 18 23.353155591803244 25.123649363677984 32.04434448533428 19.478850559184494 19 26.60594067332301 26.59293153440292 26.765886368507207 20.035241423766863 20 27.18509753101554 27.299094280398645 26.770723099644165 18.74508508894165 21 23.832075366278143 26.454167385921945 30.666793422379225 19.04696382542069 22 23.117073077170044 23.50759742052125 29.63473506805197 23.74059443425673 23 20.067097135737853 27.709048940213833 29.464532167180778 22.759321756867532 24 20.898597931713695 26.59785165745603 33.26620284082902 19.23734757000126 25 21.054957774503254 26.575252448178176 31.04797787112113 21.32181190619744 26 19.586926482520635 30.2270678484969 27.485892172584574 22.700113496397886 27 19.56215908342277 29.508896666574934 30.756356340329084 20.17258790967321 28 17.03621794310503 28.119837519190565 33.976034831135536 20.867909706568867 29 18.179104154001518 27.05275456007846 33.27095618004982 21.497185105870205 30 21.12242183467219 27.549603596526563 31.00419711514005 20.323777453661197 31 25.094128625359314 26.79407283616741 27.469714140850616 20.64208439762266 32 25.915205431815853 27.204944807060293 27.294340941177843 19.585508819946014 33 24.334678444940906 27.031322837626764 26.760882853537943 21.873115863894384 34 19.48627243972224 28.08548004973494 29.35095237737844 23.07729513316438 35 20.011391335746694 28.16486915391396 29.32118146331131 22.50255804702804 36 26.012690581800378 26.300476084449325 27.458372840253613 20.22846049349668 37 20.523667876683373 30.9684219831098 27.80269806205526 20.70521207815157 38 20.925533520631575 30.733256779554303 25.689963866282728 22.651245833531387 39 20.471881496751468 28.437227152074335 27.585462120472965 23.505429230701232 40 23.435463413047668 26.304812464089355 27.56694911508668 22.692775007776298 41 19.405132105303977 25.66152722287407 28.636367047851113 26.29697362397084 42 21.917480363288544 26.6641482307988 27.61464929112702 23.803722114785636 43 21.474919464256974 26.3122343446271 27.939794372213143 24.27305181890278 44 20.758916472155022 28.481174691887716 28.042699996747718 22.717208839209544 45 19.646635094487213 30.195295528442063 26.195902621591667 23.962166755479057 46 22.212354178810614 28.16311792367471 27.80703444169529 21.81749345581938 47 20.755330619760382 27.500735933660064 28.310471439519596 23.433462007059962 48 21.645872892373557 26.70134102540368 29.1940087911758 22.45877729104696 49 21.889043719879883 25.027498484351923 29.4752897243647 23.608168071403494 50 19.87696356690575 28.391945341602476 28.720676275083246 23.010414816408527 51 19.54931672833499 29.29841547020115 26.922829954709847 24.229437846754013 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 576.0 1 1120.5 2 1665.0 3 7623.5 4 13582.0 5 9679.0 6 5776.0 7 5335.5 8 4895.0 9 5298.0 10 5701.0 11 5858.5 12 6016.0 13 6118.0 14 6220.0 15 5882.0 16 5544.0 17 5315.0 18 5086.0 19 5096.0 20 5106.0 21 5809.5 22 6513.0 23 6720.5 24 6928.0 25 7744.0 26 10471.0 27 12382.0 28 13912.0 29 15442.0 30 18393.0 31 21344.0 32 23461.5 33 25579.0 34 28696.0 35 31813.0 36 34386.5 37 36960.0 38 42294.0 39 47628.0 40 58020.0 41 68412.0 42 78549.0 43 88686.0 44 92642.5 45 96599.0 46 99786.5 47 102974.0 48 104162.5 49 105351.0 50 100169.5 51 94988.0 52 85071.5 53 75155.0 54 69521.0 55 63887.0 56 60070.5 57 56254.0 58 53076.0 59 49898.0 60 43992.0 61 38086.0 62 33470.0 63 28854.0 64 24708.0 65 20562.0 66 16973.5 67 13385.0 68 11393.5 69 9402.0 70 7620.5 71 5839.0 72 4598.5 73 3358.0 74 2636.5 75 1491.0 76 1067.0 77 832.5 78 598.0 79 431.5 80 265.0 81 204.0 82 143.0 83 103.0 84 63.0 85 49.0 86 35.0 87 28.0 88 21.0 89 21.0 90 21.0 91 20.5 92 20.0 93 11.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1199157.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.24933198179287 #Duplication Level Percentage of deduplicated Percentage of total 1 76.47102128480834 19.30842203406875 2 7.642313821944041 3.8592663759861883 3 2.7796702357294802 2.105544497455263 4 1.5254167004679868 1.5406301072274917 5 0.935909964256214 1.1815550696286525 6 0.6888469704017884 1.0435755504196202 7 0.5654850475676687 0.9994683787743202 8 0.45127497874593225 0.9115513402746053 9 0.3808809495655621 0.8655290587009247 >10 7.588032885836157 50.65565912680109 >50 0.9143940174418451 13.920135988708118 >100 0.053080881025675666 2.2076305188041188 >500 0.0030045781712616797 0.5045771777607173 >1k 3.3384201902907556E-4 0.13579582916346736 >5k 3.3384201902907556E-4 0.7606589462266478 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9024 0.7525286513775928 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1611 0.13434437692478968 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.339191615443182E-5 0.0 0.0 0.07079973681511262 0.0 2 8.339191615443182E-5 0.0 0.0 0.23541537930396103 0.0 3 8.339191615443182E-5 0.0 0.0 0.3681753098218165 0.0 4 8.339191615443182E-5 0.0 0.0 0.6081772445142712 0.0 5 8.339191615443182E-5 0.0 0.0 1.1205371773671005 0.0 6 8.339191615443182E-5 0.0 0.0 1.6940233847611281 0.0 7 8.339191615443182E-5 0.0 0.0 2.019001682014949 0.0 8 8.339191615443182E-5 0.0 0.0 2.73291987621304 0.0 9 8.339191615443182E-5 0.0 0.0 3.0413031821521286 0.0 10 8.339191615443182E-5 0.0 0.0 3.563253185362717 0.0 11 8.339191615443182E-5 0.0 0.0 4.1879420292755665 0.0 12 8.339191615443182E-5 0.0 0.0 4.667695722912012 0.0 13 8.339191615443182E-5 0.0 0.0 4.86691901060495 0.0 14 8.339191615443182E-5 0.0 0.0 4.95873351029098 0.0 15 8.339191615443182E-5 0.0 0.0 5.091159873144218 0.0 16 8.339191615443182E-5 0.0 0.0 5.375943266811602 0.0 17 8.339191615443182E-5 0.0 0.0 5.735946168850284 0.0 18 8.339191615443182E-5 0.0 0.0 6.173837120577206 0.0 19 8.339191615443182E-5 0.0 0.0 6.3910730621595 0.0 20 8.339191615443182E-5 0.0 0.0 6.638079917808928 0.0 21 8.339191615443182E-5 0.0 0.0 6.943127547101839 0.0 22 8.339191615443182E-5 0.0 0.0 7.268272628187969 0.0 23 8.339191615443182E-5 0.0 0.0 7.607677726936506 0.0 24 8.339191615443182E-5 0.0 0.0 7.847929837377424 0.0 25 8.339191615443182E-5 0.0 0.0 8.059578520577372 0.0 26 8.339191615443182E-5 0.0 0.0 8.264722634317275 0.0 27 8.339191615443182E-5 0.0 0.0 8.515148558529033 0.0 28 8.339191615443182E-5 0.0 0.0 8.747061477354508 0.0 29 8.339191615443182E-5 0.0 0.0 9.01541666353947 0.0 30 8.339191615443182E-5 0.0 0.0 9.35732351977264 0.0 31 8.339191615443182E-5 0.0 0.0 9.623927475718359 0.0 32 8.339191615443182E-5 0.0 0.0 9.869600060709315 0.0 33 8.339191615443182E-5 0.0 0.0 10.120693120250309 0.0 34 8.339191615443182E-5 0.0 0.0 10.389131698351425 0.0 35 8.339191615443182E-5 0.0 0.0 10.707105074648274 0.0 36 8.339191615443182E-5 0.0 0.0 10.968455339876263 0.0 37 8.339191615443182E-5 0.0 0.0 11.248151826658228 0.0 38 8.339191615443182E-5 0.0 0.0 11.585472127502904 0.0 39 8.339191615443182E-5 0.0 0.0 12.164212025614662 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCCGCG 20 7.033408E-4 45.000004 27 TACGGGA 355 0.0 43.09859 4 CGTTTTT 3975 0.0 41.43396 1 TAACGCC 115 0.0 41.086956 12 CGTAAGG 205 0.0 40.609756 2 TCGCAAG 45 1.9284926E-8 40.0 1 ACGGGAT 490 0.0 39.94898 5 GCGCGAC 265 0.0 39.905663 9 TCACGAC 300 0.0 39.750004 25 TAGACGG 170 0.0 39.705883 2 CGGGATA 210 0.0 39.642857 6 GCCGACC 150 0.0 39.000004 14 CGACGGT 295 0.0 38.898304 28 CGCATCG 105 0.0 38.57143 21 TCGATAG 35 6.248514E-6 38.57143 1 CGGTCTA 300 0.0 38.250004 31 TCGTTTA 100 0.0 38.25 38 CTACGGG 265 0.0 38.207546 3 CACAACG 165 0.0 38.181816 12 GCGTAAG 130 0.0 38.07692 1 >>END_MODULE