##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547869_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2878722 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.446465827544305 31.0 31.0 33.0 30.0 34.0 2 31.84993375532615 31.0 31.0 34.0 30.0 34.0 3 31.787114212487346 31.0 31.0 34.0 30.0 34.0 4 35.64716391509844 37.0 35.0 37.0 33.0 37.0 5 35.60992030491308 37.0 35.0 37.0 33.0 37.0 6 35.669334517192006 37.0 35.0 37.0 33.0 37.0 7 35.99030472549972 37.0 35.0 37.0 35.0 37.0 8 36.016245055965804 37.0 35.0 37.0 35.0 37.0 9 37.74062969609431 39.0 38.0 39.0 35.0 39.0 10 37.3194202149426 39.0 37.0 39.0 34.0 39.0 11 37.03914132729732 39.0 37.0 39.0 33.0 39.0 12 36.61385156329788 39.0 35.0 39.0 33.0 39.0 13 36.489489780534555 39.0 35.0 39.0 32.0 39.0 14 37.53390844965231 40.0 36.0 41.0 32.0 41.0 15 37.68025985142018 40.0 36.0 41.0 33.0 41.0 16 37.75583957047606 40.0 36.0 41.0 33.0 41.0 17 37.66994346796947 40.0 36.0 41.0 33.0 41.0 18 37.5214275640371 39.0 36.0 41.0 32.0 41.0 19 37.42149155076454 39.0 36.0 41.0 32.0 41.0 20 37.21063687289012 39.0 35.0 41.0 32.0 41.0 21 37.10320447754246 39.0 35.0 41.0 32.0 41.0 22 37.03271382231421 39.0 35.0 41.0 32.0 41.0 23 36.933012982844474 39.0 35.0 41.0 32.0 41.0 24 36.98744998648706 39.0 35.0 41.0 32.0 41.0 25 36.97110870726663 39.0 35.0 41.0 32.0 41.0 26 36.885250816160784 39.0 35.0 41.0 32.0 41.0 27 36.797900596167324 39.0 35.0 41.0 31.0 41.0 28 36.70628042582785 38.0 35.0 41.0 31.0 41.0 29 36.671456639439306 38.0 35.0 41.0 31.0 41.0 30 36.54019353032353 38.0 35.0 41.0 31.0 41.0 31 36.33011732289537 38.0 35.0 41.0 30.0 41.0 32 36.14352375811211 38.0 35.0 41.0 30.0 41.0 33 35.90860458217223 38.0 35.0 41.0 29.0 41.0 34 35.646749842464814 38.0 35.0 41.0 27.0 41.0 35 35.460639478212904 38.0 34.0 40.0 26.0 41.0 36 35.328424905218355 38.0 34.0 40.0 25.0 41.0 37 35.250457668368114 38.0 34.0 40.0 25.0 41.0 38 35.12902148939703 38.0 34.0 40.0 24.0 41.0 39 35.018839957453345 38.0 34.0 40.0 24.0 41.0 40 34.86426059897413 38.0 34.0 40.0 23.0 41.0 41 34.76211978787809 38.0 34.0 40.0 23.0 41.0 42 34.672956610607066 38.0 34.0 40.0 23.0 41.0 43 34.605603111380674 38.0 34.0 40.0 23.0 41.0 44 34.410356053832224 37.0 33.0 40.0 23.0 41.0 45 34.284063900578104 37.0 33.0 40.0 23.0 41.0 46 34.23307078627252 37.0 33.0 40.0 23.0 41.0 47 34.14573202969929 37.0 33.0 40.0 22.0 41.0 48 34.01153636926386 37.0 33.0 40.0 22.0 41.0 49 33.85641336676483 36.0 33.0 40.0 21.0 41.0 50 33.78432894874879 36.0 33.0 40.0 20.0 41.0 51 33.454644456811046 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 1.0 11 8.0 12 6.0 13 11.0 14 26.0 15 86.0 16 208.0 17 506.0 18 1216.0 19 2273.0 20 4139.0 21 6757.0 22 10878.0 23 16038.0 24 24576.0 25 37196.0 26 50463.0 27 58275.0 28 60586.0 29 64120.0 30 71473.0 31 83165.0 32 100536.0 33 128963.0 34 211887.0 35 279527.0 36 207386.0 37 272933.0 38 434909.0 39 750493.0 40 77.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.33735108843438 24.663062289446497 28.9330821107422 16.066504511376923 2 33.267922362770705 25.47939676009007 28.0837468849024 13.168933992236834 3 28.69064814177958 25.04323098930706 32.95062878596822 13.315492082945141 4 25.51719130919901 26.877412963113496 32.97782835577732 14.627567371910175 5 23.406949333766857 30.605629859361205 30.99100920477906 14.996411602092873 6 21.51402601571114 38.941898523025145 28.404896339417284 11.13917912184643 7 85.31431656130741 3.1764790070038025 9.37610509107861 2.1330993406101735 8 85.92031463962132 2.445043321307163 9.039045798795438 2.595596240276067 9 80.42874581150942 4.959944030719187 11.081340956160407 3.5299692016109927 10 41.63594122669713 32.65723470345521 15.195145623648271 10.511678446199388 11 30.491864098026834 21.953735025473108 30.12163036236219 17.43277051413787 12 29.063244036763535 20.309290025226474 31.610485486267866 19.01698045174213 13 23.873510536967444 24.447549989196595 32.58272247198583 19.09621700185013 14 18.439814612178598 28.24142101946628 33.119210538565376 20.199553829789746 15 18.110536550594325 25.202086203530595 38.49166400923743 18.195713236637648 16 22.498178010936797 23.753735164423656 35.5313920552245 18.21669476941504 17 22.111791274044524 23.391803724013645 30.365870688451334 24.1305343134905 18 23.473402433440953 23.956741915336043 32.5302339024053 20.039621748817705 19 25.114582095805016 26.176859036753115 28.974280948281912 19.734277919159958 20 25.45025188260624 26.442810385997674 28.748034718183973 19.35890301321211 21 24.540577381212913 25.718739079355352 31.45138710858499 18.289296430846743 22 23.608879217930735 22.68430227024353 31.5887397254754 22.11807878635033 23 21.042254166953253 26.412866542861728 30.638908515653824 21.9059707745312 24 21.162203227682284 25.14042689776922 33.4964960145509 20.200873859997596 25 21.987083157039823 25.673232774821603 30.43454699689654 21.90513707124203 26 20.02423297560515 27.502377791255984 29.83490590616253 22.638483326976345 27 19.74310127897032 26.35784212577665 32.06402007557521 21.83503651967783 28 19.244789875507255 26.027904049088452 33.71489153867584 21.012414536728453 29 20.2202227238337 25.02714746335353 33.06606195388092 21.686567858931845 30 22.423144714911686 24.499204855487953 32.51046818692461 20.567182242675745 31 24.38863495676206 23.81153859247263 30.806552352050666 20.993274098714636 32 25.83670809477261 24.002908234973713 30.303725055771274 19.8566586144824 33 24.000546075654405 24.46245243549047 30.835141427341718 20.701860061513408 34 21.643979515910186 24.55207553907602 32.41841344874566 21.385531496268136 35 20.646140891687352 25.792695508631958 31.799076117805054 21.76208748187564 36 23.785172725952698 25.292959862049898 30.340234312309423 20.581633099687988 37 21.468415498266243 26.725540013936737 29.84491034563254 21.961134142164475 38 21.630153936364817 27.267551364807023 29.108020850919264 21.9942738479089 39 21.344992673832348 26.148513124921408 28.813306738198406 23.69318746304784 40 23.66008249494046 24.515878921271312 29.10857665311204 22.71546193067618 41 20.41923464648549 24.716454037590292 29.778526721232545 25.085784594691674 42 21.89732110290608 25.387168333725867 28.81587732334001 23.899633240028038 43 21.417802761086342 25.366742603141258 29.55162047603068 23.663834159741718 44 21.505793195730604 26.62612089670347 29.326694276140593 22.541391631425334 45 20.588545889460672 26.984717523956814 27.79796034490305 24.628776241679468 46 22.313095880741525 26.12193883257918 28.656049455279113 22.908915831400183 47 21.174187712464075 25.708838852796482 29.94804639003002 23.168927044709424 48 21.796130366183327 24.704122176438016 30.928203556995083 22.571543900383574 49 22.611526920626584 23.719205953197285 30.249221703241925 23.420045422934205 50 20.523794934001963 25.340689375354756 30.851607067302783 23.283908623340498 51 19.916233662020854 25.98225879400651 29.90111584237728 24.20039170159536 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1234.0 1 2319.0 2 3404.0 3 25834.5 4 48265.0 5 34522.0 6 20779.0 7 18764.5 8 16750.0 9 16959.0 10 17168.0 11 17108.5 12 17049.0 13 16760.5 14 16472.0 15 15524.5 16 14577.0 17 13725.0 18 12873.0 19 12530.0 20 12187.0 21 12877.0 22 13567.0 23 14774.0 24 15981.0 25 18291.0 26 23006.0 27 25411.0 28 29699.0 29 33987.0 30 40039.0 31 46091.0 32 52271.0 33 58451.0 34 66909.0 35 75367.0 36 80650.5 37 85934.0 38 97168.0 39 108402.0 40 125904.5 41 143407.0 42 162014.0 43 180621.0 44 190666.5 45 200712.0 46 217849.5 47 234987.0 48 242444.5 49 249902.0 50 240725.5 51 231549.0 52 213216.5 53 194884.0 54 176376.0 55 157868.0 56 152250.0 57 146632.0 58 140323.5 59 134015.0 60 123132.5 61 112250.0 62 97824.5 63 83399.0 64 70228.5 65 57058.0 66 45962.0 67 34866.0 68 28033.0 69 21200.0 70 17040.5 71 12881.0 72 10489.0 73 8097.0 74 6339.5 75 3680.5 76 2779.0 77 2136.5 78 1494.0 79 970.0 80 446.0 81 372.0 82 298.0 83 205.0 84 112.0 85 84.0 86 56.0 87 46.0 88 36.0 89 28.5 90 21.0 91 14.5 92 8.0 93 8.0 94 8.0 95 5.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2878722.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.718805510567282 #Duplication Level Percentage of deduplicated Percentage of total 1 77.3830376394843 18.354332195878357 2 7.42019348908366 3.5199625243670587 3 2.651701320289587 1.8868556366418956 4 1.422363803616792 1.3494708169302962 5 0.9263484239466451 1.09859390513055 6 0.6520274287877869 0.9279187062583664 7 0.5272182344417969 0.8753490735044752 8 0.4356082091633394 0.8265685113561407 9 0.37473398231075494 0.7999418200166241 >10 6.449365955328255 39.96623916430643 >50 1.6816956889098171 25.501074024181534 >100 0.07049123330044468 2.5121782247827693 >500 0.0028307781542513183 0.4426822675358923 >1k 0.002234824858619462 0.8935983475038005 >5k 0.0 0.0 >10k+ 1.489883239079641E-4 1.0452347816058611 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29578 1.0274698286253414 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3004 0.10435186169418235 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTT 2928 0.101711801278484 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04752108748257039 0.0 2 0.0 0.0 0.0 0.21137852144111172 0.0 3 0.0 0.0 0.0 0.4338383491007468 0.0 4 0.0 0.0 0.0 0.672138539254572 0.0 5 0.0 0.0 0.0 1.2533339447157454 0.0 6 0.0 0.0 0.0 2.295080942168087 0.0 7 0.0 0.0 0.0 2.855815879407598 0.0 8 0.0 0.0 0.0 3.895270192814728 0.0 9 0.0 0.0 0.0 4.568311910632565 0.0 10 0.0 0.0 0.0 5.410838559610827 0.0 11 0.0 0.0 0.0 6.118270538106841 0.0 12 0.0 0.0 0.0 6.633429695538506 0.0 13 0.0 0.0 0.0 6.882845929547903 0.0 14 0.0 0.0 0.0 7.046217036587763 0.0 15 0.0 0.0 0.0 7.180373790869698 0.0 16 0.0 0.0 0.0 7.403042044351626 0.0 17 0.0 0.0 0.0 7.654438323672797 0.0 18 0.0 0.0 0.0 7.986182757487524 0.0 19 0.0 0.0 0.0 8.185819957606189 0.0 20 0.0 0.0 0.0 8.401749109500674 0.0 21 0.0 0.0 0.0 8.641265116951203 0.0 22 0.0 0.0 0.0 8.905826960713817 0.0 23 0.0 0.0 0.0 9.177058430789774 0.0 24 0.0 0.0 0.0 9.393126533232456 0.0 25 0.0 0.0 0.0 9.583836160629613 0.0 26 0.0 0.0 0.0 9.768466701543254 0.0 27 0.0 0.0 0.0 9.978525192776516 0.0 28 0.0 0.0 0.0 10.178127655258132 0.0 29 0.0 0.0 0.0 10.39867691288009 0.0 30 0.0 0.0 0.0 10.692592059948824 0.0 31 0.0 0.0 0.0 10.92074886008444 0.0 32 0.0 0.0 0.0 11.159222738423509 0.0 33 0.0 0.0 0.0 11.391165940997428 0.0 34 0.0 0.0 0.0 11.630299834440422 0.0 35 0.0 0.0 0.0 11.895209054573522 0.0 36 0.0 0.0 0.0 12.127916485162514 0.0 37 0.0 0.0 0.0 12.372087335977563 0.0 38 0.0 0.0 0.0 12.6607223622149 0.0 39 0.0 0.0 0.0 13.074239193642178 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14740 0.0 42.49661 1 TACGGGA 1250 0.0 39.06 4 TAACGGG 725 0.0 38.482758 3 ACGGGAT 1245 0.0 38.13253 5 CGGTCTA 335 0.0 37.611942 31 AGGGCGA 2065 0.0 37.5908 6 GGGCGAT 3885 0.0 37.413128 7 GACCGAT 1025 0.0 37.31707 9 TAGGGAC 3295 0.0 37.283764 5 TAGGGAT 4830 0.0 36.801243 5 GGCGATA 955 0.0 36.75392 8 TAGGGCG 840 0.0 36.69643 5 GTAGGGA 3930 0.0 36.58397 4 TAAGGGA 3460 0.0 36.546246 4 AGGGATC 3465 0.0 36.493507 6 TATCGCG 105 0.0 36.42857 1 TTAGGGA 3960 0.0 36.306816 4 CGTAAGG 465 0.0 36.290325 2 GCGCGAC 355 0.0 36.126762 9 AAGGGAT 4380 0.0 36.113014 5 >>END_MODULE