##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547867_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2635520 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.48946317994172 31.0 31.0 33.0 30.0 34.0 2 31.908563774890723 31.0 31.0 34.0 30.0 34.0 3 31.999909315808644 33.0 31.0 34.0 30.0 34.0 4 35.77383362676056 37.0 35.0 37.0 35.0 37.0 5 35.6883776256678 37.0 35.0 37.0 33.0 37.0 6 35.72527357030112 37.0 35.0 37.0 33.0 37.0 7 36.02697304516756 37.0 35.0 37.0 35.0 37.0 8 36.047581881374455 37.0 35.0 37.0 35.0 37.0 9 37.7996801390238 39.0 38.0 39.0 35.0 39.0 10 37.33706365347256 39.0 37.0 39.0 34.0 39.0 11 37.0247283268577 39.0 37.0 39.0 33.0 39.0 12 36.52754788428849 39.0 35.0 39.0 33.0 39.0 13 36.358566810344826 39.0 35.0 39.0 32.0 39.0 14 37.399087466610005 40.0 35.0 41.0 32.0 41.0 15 37.586232697911605 40.0 35.0 41.0 33.0 41.0 16 37.67856817629917 40.0 35.0 41.0 33.0 41.0 17 37.61023023919378 39.0 35.0 41.0 33.0 41.0 18 37.51998922413793 39.0 36.0 41.0 33.0 41.0 19 37.45955219463332 39.0 36.0 41.0 32.0 41.0 20 37.33591283693541 39.0 35.0 41.0 32.0 41.0 21 37.229745932491504 39.0 35.0 41.0 32.0 41.0 22 37.153607637202526 39.0 35.0 41.0 32.0 41.0 23 37.04668831957261 39.0 35.0 41.0 32.0 41.0 24 37.085872996600294 39.0 35.0 41.0 32.0 41.0 25 37.060819876153474 39.0 35.0 41.0 32.0 41.0 26 36.97365301724138 39.0 35.0 41.0 32.0 41.0 27 36.89088225473531 39.0 35.0 41.0 32.0 41.0 28 36.82802445058281 39.0 35.0 41.0 31.0 41.0 29 36.84280635320544 39.0 35.0 41.0 31.0 41.0 30 36.76657471770277 38.0 35.0 41.0 31.0 41.0 31 36.632362493929094 38.0 35.0 41.0 31.0 41.0 32 36.51886952100534 38.0 35.0 41.0 31.0 41.0 33 36.43954210174842 38.0 35.0 41.0 30.0 41.0 34 36.31769366197183 38.0 35.0 41.0 30.0 41.0 35 36.25144335842642 38.0 35.0 41.0 30.0 41.0 36 36.14606681034483 38.0 35.0 41.0 30.0 41.0 37 36.05341640359398 38.0 35.0 41.0 30.0 41.0 38 35.95597339424478 38.0 35.0 40.0 30.0 41.0 39 35.87352628703254 38.0 35.0 40.0 29.0 41.0 40 35.72112486340457 38.0 35.0 40.0 29.0 41.0 41 35.67845852051967 38.0 35.0 40.0 29.0 41.0 42 35.61446583596406 38.0 35.0 40.0 28.0 41.0 43 35.5329365741865 38.0 35.0 40.0 28.0 41.0 44 35.373092217095675 38.0 34.0 40.0 27.0 41.0 45 35.21558819511899 38.0 34.0 40.0 27.0 41.0 46 35.15638128339 38.0 34.0 40.0 27.0 41.0 47 35.07152857880039 37.0 34.0 40.0 27.0 41.0 48 35.008841898373 37.0 34.0 40.0 26.0 41.0 49 34.87106643091307 37.0 34.0 40.0 26.0 41.0 50 34.78261253946091 37.0 34.0 40.0 26.0 41.0 51 34.431741743564835 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 3.0 11 3.0 12 11.0 13 14.0 14 29.0 15 43.0 16 132.0 17 321.0 18 732.0 19 1513.0 20 2712.0 21 4367.0 22 6808.0 23 10528.0 24 15875.0 25 23211.0 26 31450.0 27 37208.0 28 42407.0 29 49088.0 30 58831.0 31 71898.0 32 89710.0 33 117635.0 34 203141.0 35 301924.0 36 185778.0 37 244819.0 38 398503.0 39 736733.0 40 90.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.21412852112676 24.792450825643517 29.111105208839245 12.88231544439048 2 29.753445240407967 26.184244475473527 30.22139843370568 13.840911850412821 3 28.325985004856726 26.325468977659057 31.30239952646916 14.046146491015055 4 25.015404929577468 28.759827282661487 31.33924235065566 14.88552543710539 5 23.370568237008257 32.117191294317635 29.792071393880526 14.72016907479359 6 21.424045349684313 40.92573761534726 26.534953254006798 11.115263780961632 7 89.39541342884895 3.157441415735794 5.616462785332685 1.8306823700825643 8 90.14839576250607 2.298977051966974 5.274860369111219 2.277766816415736 9 84.95754158572122 5.091594827586207 7.122579225352113 2.8282843613404567 10 44.3015420106848 34.22865316901408 11.605641391452162 9.864163428848956 11 32.714378946090335 23.317599562894607 27.035954953861097 16.932066537153958 12 31.537305730937348 22.305389448761535 28.232796563865953 17.92450825643516 13 23.602552816901408 30.4456805488101 28.88185253763963 17.06991409664886 14 17.714454832442932 33.91144821515299 30.065565808644973 18.308531143759108 15 16.458383924235065 26.978471041767847 39.13379522826615 17.429349805730936 16 20.49777652986887 24.433053059737738 36.52607455075279 18.5430958596406 17 20.688630706653715 24.12647219524041 28.17971406022341 27.005183037882468 18 22.2472605026712 25.516216913550267 31.74045349684313 20.496069086935407 19 24.95355755220981 27.297611097620205 27.43276469159786 20.316066658572122 20 26.63789309130646 27.127170349684317 26.463392423506555 19.771544135502673 21 23.815338149587177 27.12910545167557 29.62034057795046 19.435215820786787 22 22.886906568722683 23.62376305245265 28.95314776590578 24.536182612918893 23 19.70373967945605 28.42213301359883 28.93702191597863 22.93710539096649 24 20.16820210053424 26.29261018698397 33.74586419378339 19.793323518698397 25 20.178105269548325 27.169287275376398 30.976581471588148 21.67602598348713 26 19.230474441476446 31.191719281204467 27.328876274890725 22.248930002428363 27 19.46788489558038 30.00216276104905 29.973477719766876 20.55647462360369 28 17.379454528897522 28.11551420592521 33.99503703254007 20.5099942326372 29 17.86501335599806 26.284680063137444 33.82782145458961 22.02248512627489 30 20.343651347741623 27.344926238465273 31.78913459203497 20.522287821758134 31 24.29736826129189 27.40954346770277 26.674128824672174 21.61895944633317 32 24.51876669499757 27.681254553181155 27.393531447304515 20.406447304516757 33 22.843158086449733 26.989512506070906 27.038307430791647 23.129021976687714 34 19.029717095677515 28.285613465274405 29.397841792132102 23.286827646915977 35 19.00456076979116 28.030559434191353 29.2462967459932 23.718583050024282 36 23.615149951432734 27.14424477901894 27.707966549295776 21.53263872025255 37 19.79415826857698 30.14611917192812 28.41052240165129 21.649200157843612 38 19.475473530840215 30.43604298203011 26.401431216610007 23.687052270519672 39 19.472551906265178 28.78540098348713 27.673817690626517 24.068229419621176 40 21.67234549538611 26.74724532540068 27.79967520641088 23.78073397280233 41 18.22748451918407 26.26650528169014 28.571439412336087 26.934570786789703 42 21.451478266148616 26.675267119961145 27.076098834385625 24.797155779504614 43 21.096443965517242 26.703193297717338 28.088764266634286 24.11159847013113 44 20.504530415250123 28.698169621175328 27.622025254978144 23.175274708596405 45 19.686323761534727 30.181937530354542 26.21949368625546 23.91224502185527 46 22.15938410636231 28.56066355026712 27.483115286546866 21.7968370568237 47 19.919029261777563 28.218567872753763 28.582139388052454 23.28026347741622 48 20.873831350169986 25.843666525012143 29.62201007770762 23.66049204711025 49 20.813805245264692 24.989110308402136 29.917966852841182 24.279117593491986 50 19.30784057795046 27.9870765541525 29.45718491986401 23.247897948033025 51 18.785666585721223 28.962443844099077 27.35471557795046 24.897173992229238 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 868.0 1 1801.5 2 2735.0 3 10876.5 4 19018.0 5 14060.5 6 9103.0 7 8566.5 8 8030.0 9 8312.5 10 8595.0 11 8807.5 12 9020.0 13 9086.0 14 9152.0 15 8862.0 16 8572.0 17 8448.5 18 8325.0 19 8693.0 20 9061.0 21 9662.5 22 10264.0 23 11810.0 24 13356.0 25 16190.5 26 22710.5 27 26396.0 28 32403.5 29 38411.0 30 46240.5 31 54070.0 32 59133.5 33 64197.0 34 72695.0 35 81193.0 36 87552.0 37 93911.0 38 103498.5 39 113086.0 40 137836.5 41 162587.0 42 185470.0 43 208353.0 44 218847.5 45 229342.0 46 235025.0 47 240708.0 48 241744.0 49 242780.0 50 227661.0 51 212542.0 52 193747.0 53 174952.0 54 153681.0 55 132410.0 56 122042.0 57 111674.0 58 103179.0 59 94684.0 60 86131.0 61 77578.0 62 66059.0 63 54540.0 64 45672.5 65 36805.0 66 28804.0 67 20803.0 68 16463.0 69 12123.0 70 9761.5 71 7400.0 72 5971.0 73 4542.0 74 3520.5 75 1899.0 76 1299.0 77 1089.5 78 880.0 79 589.5 80 299.0 81 214.5 82 130.0 83 123.0 84 116.0 85 73.0 86 30.0 87 23.5 88 17.0 89 15.0 90 13.0 91 9.5 92 6.0 93 12.5 94 19.0 95 10.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2635520.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.937604573656316 #Duplication Level Percentage of deduplicated Percentage of total 1 76.03749462254876 15.160055005558956 2 9.34847131529604 3.7277224890508243 3 3.270038885413761 1.955902267135782 4 1.6233020300634733 1.2945901591607636 5 0.957851236757052 0.9548629599424879 6 0.6561369897725985 0.7849079908941148 7 0.4568161596206081 0.6375473967360366 8 0.3887121170456669 0.6199990786116253 9 0.3097896706042402 0.5558817558159523 >10 3.845340423639891 19.323771878822875 >50 2.3227264367193112 34.10113807292308 >100 0.7773184233857158 19.39942096947792 >500 0.004452866130817392 0.6001107129813784 >1k 0.0013552201267705106 0.43965144535009326 >5k 0.0 0.0 >10k+ 1.936028752529301E-4 0.4444378175382769 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11514 0.43687773190869356 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2709 0.10278806459446334 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.7943176299174355E-5 0.0 0.0 0.0948579407479359 0.0 2 3.7943176299174355E-5 0.0 0.0 0.3058978873239437 0.0 3 3.7943176299174355E-5 0.0 0.0 0.4648797960174842 0.0 4 3.7943176299174355E-5 0.0 0.0 0.7535135381253035 0.0 5 3.7943176299174355E-5 0.0 0.0 1.360983790675085 0.0 6 3.7943176299174355E-5 0.0 0.0 2.0287457503642545 0.0 7 3.7943176299174355E-5 0.0 0.0 2.3867016755706656 0.0 8 3.7943176299174355E-5 0.0 0.0 3.224449065080136 0.0 9 3.7943176299174355E-5 0.0 0.0 3.5556171078193297 0.0 10 3.7943176299174355E-5 0.0 0.0 4.136451250607091 0.0 11 3.7943176299174355E-5 0.0 0.0 4.839386534725595 0.0 12 3.7943176299174355E-5 0.0 0.0 5.379773251578436 0.0 13 3.7943176299174355E-5 0.0 0.0 5.599919560466246 0.0 14 3.7943176299174355E-5 0.0 0.0 5.6949672170956775 0.0 15 3.7943176299174355E-5 0.0 0.0 5.82905840213696 0.0 16 3.7943176299174355E-5 0.0 0.0 6.122472984458475 0.0 17 3.7943176299174355E-5 0.0 0.0 6.485968613404565 0.0 18 3.7943176299174355E-5 0.0 0.0 6.918369050509956 0.0 19 3.7943176299174355E-5 0.0 0.0 7.166100048567266 0.0 20 3.7943176299174355E-5 0.0 0.0 7.4137172170956775 0.0 21 3.7943176299174355E-5 0.0 0.0 7.728379978144731 0.0 22 7.588635259834871E-5 0.0 0.0 8.088043346284604 0.0 23 7.588635259834871E-5 0.0 0.0 8.454194997571637 0.0 24 7.588635259834871E-5 0.0 0.0 8.72973834385624 0.0 25 7.588635259834871E-5 0.0 0.0 8.96187469645459 0.0 26 7.588635259834871E-5 0.0 0.0 9.180389448761535 0.0 27 7.588635259834871E-5 0.0 0.0 9.420417982030111 0.0 28 7.588635259834871E-5 0.0 0.0 9.659649708596406 0.0 29 7.588635259834871E-5 0.0 0.0 9.93655900922778 0.0 30 7.588635259834871E-5 0.0 0.0 10.258620689655173 0.0 31 1.1382952889752307E-4 0.0 0.0 10.54361188683827 0.0 32 1.1382952889752307E-4 0.0 0.0 10.798779747450219 0.0 33 1.1382952889752307E-4 0.0 0.0 11.054364983001458 0.0 34 1.1382952889752307E-4 0.0 0.0 11.329111522583778 0.0 35 1.1382952889752307E-4 0.0 0.0 11.645785271976688 0.0 36 1.1382952889752307E-4 0.0 0.0 11.919165857212239 0.0 37 1.1382952889752307E-4 0.0 0.0 12.195354237493929 0.0 38 1.1382952889752307E-4 0.0 0.0 12.48300145701797 0.0 39 1.1382952889752307E-4 0.0 0.0 12.870097741622146 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 20 7.0349494E-4 45.0 37 CGTTAGG 335 0.0 42.313435 2 CGTAAGG 370 0.0 41.959457 2 CGACGGT 345 0.0 41.739132 28 CGTTTTT 5925 0.0 41.392403 1 CGGTCTA 360 0.0 40.0 31 CTATGCG 125 0.0 39.6 1 TAGGGCG 725 0.0 39.413795 5 CTACCGT 40 3.4605E-7 39.375 24 TAAGGGA 3560 0.0 38.99579 4 TACGGGA 1205 0.0 38.65145 4 TAGGGAC 3290 0.0 38.571426 5 TAGTCGG 70 0.0 38.571426 2 GGGCGAT 3350 0.0 38.417908 7 TTGCGAG 205 0.0 38.414635 1 TATAGCG 130 0.0 38.076927 1 GATCGAC 30 1.1403223E-4 37.500004 22 TCGCTAA 30 1.1403223E-4 37.500004 22 AGGGCGA 1815 0.0 37.066116 6 CGGGTAT 170 0.0 37.058823 6 >>END_MODULE