SRR1547865_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547865_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1540069
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5826	0.3782947387422252	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	4166	0.2705073603845023	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	1544	0.10025524830380977	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTTTCG	30	2.1659853E-6	45.000004	11
ACGGGTC	30	2.1659853E-6	45.000004	5
ATATCCG	30	2.1659853E-6	45.000004	1
AATCGAC	30	2.1659853E-6	45.000004	29
CGGACGT	30	2.1659853E-6	45.000004	33
ATCTCGA	20	7.034035E-4	45.0	44
GATCGAC	20	7.034035E-4	45.0	41
CGCATCG	50	2.1827873E-11	45.0	21
CCCGTAT	25	3.8914266E-5	45.0	34
CATAGTA	40	6.8175723E-9	45.0	40
CTCGCTA	20	7.034035E-4	45.0	28
GCGATAC	100	0.0	45.0	9
TCCGTAA	20	7.034035E-4	45.0	23
TTACGAA	40	6.8175723E-9	45.0	31
TGTACGA	20	7.034035E-4	45.0	15
CCCGGTA	20	7.034035E-4	45.0	17
CGTCCAC	20	7.034035E-4	45.0	23
TATCGTG	25	3.8914266E-5	45.0	1
CGTCAAA	20	7.034035E-4	45.0	27
TAATGCG	80	0.0	45.0	1