##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547865_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1540069 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51219328484633 31.0 31.0 33.0 30.0 34.0 2 31.926296808779348 31.0 31.0 34.0 30.0 34.0 3 32.01491686411453 33.0 31.0 34.0 30.0 34.0 4 35.76954668914185 37.0 35.0 37.0 35.0 37.0 5 35.66879276188275 37.0 35.0 37.0 33.0 37.0 6 35.70857020042609 37.0 35.0 37.0 33.0 37.0 7 36.02361842229147 37.0 35.0 37.0 35.0 37.0 8 36.047051787939374 37.0 35.0 37.0 35.0 37.0 9 37.820558039931974 39.0 38.0 39.0 35.0 39.0 10 37.35877418479302 39.0 37.0 39.0 35.0 39.0 11 37.02443981406028 39.0 37.0 39.0 33.0 39.0 12 35.969776678837114 37.0 35.0 39.0 32.0 39.0 13 35.50338653657726 37.0 35.0 39.0 31.0 39.0 14 36.42269469744537 38.0 35.0 41.0 31.0 41.0 15 36.760230223451025 38.0 35.0 41.0 32.0 41.0 16 36.95731814613501 38.0 35.0 41.0 33.0 41.0 17 36.913309728330354 38.0 35.0 41.0 32.0 41.0 18 36.85858101163 38.0 35.0 41.0 32.0 41.0 19 36.770797931780976 38.0 35.0 40.0 32.0 41.0 20 36.61678080657425 38.0 35.0 40.0 32.0 41.0 21 36.457091857572614 37.0 35.0 40.0 31.0 41.0 22 36.33897377325302 37.0 35.0 40.0 31.0 41.0 23 36.32419975988089 37.0 35.0 40.0 31.0 41.0 24 36.32245438353736 37.0 35.0 40.0 31.0 41.0 25 36.31026142335181 37.0 35.0 40.0 31.0 41.0 26 36.192430339160126 37.0 35.0 40.0 31.0 41.0 27 36.09689825585737 37.0 35.0 40.0 31.0 41.0 28 36.08403324786097 37.0 35.0 40.0 31.0 41.0 29 36.1360581896006 37.0 35.0 40.0 31.0 41.0 30 36.08505398134759 36.0 35.0 40.0 31.0 41.0 31 35.89457030821346 36.0 35.0 40.0 31.0 41.0 32 35.70506126673545 36.0 34.0 40.0 30.0 41.0 33 35.613912753259754 36.0 34.0 40.0 30.0 41.0 34 35.56406433737709 36.0 35.0 40.0 30.0 41.0 35 35.490948782164956 36.0 34.0 40.0 30.0 41.0 36 35.33771863468455 36.0 34.0 40.0 29.0 41.0 37 35.21782011065738 36.0 34.0 40.0 29.0 41.0 38 35.152253567859624 36.0 34.0 40.0 29.0 41.0 39 35.128749426162074 36.0 34.0 40.0 29.0 41.0 40 34.98612789426967 36.0 34.0 40.0 27.0 41.0 41 34.97221358263818 36.0 34.0 40.0 28.0 41.0 42 34.8762873611507 36.0 34.0 40.0 27.0 41.0 43 34.77665935747035 35.0 34.0 40.0 27.0 41.0 44 34.62294676407356 35.0 34.0 40.0 27.0 41.0 45 34.47778119032329 35.0 34.0 40.0 26.0 41.0 46 34.43980432045577 35.0 34.0 40.0 26.0 41.0 47 34.37263070680599 35.0 34.0 40.0 26.0 41.0 48 34.31693060505731 35.0 34.0 40.0 26.0 41.0 49 34.23975029690228 35.0 34.0 39.0 25.0 41.0 50 34.13466994011307 35.0 34.0 39.0 25.0 41.0 51 33.76899022056804 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 2.0 12 2.0 13 5.0 14 9.0 15 36.0 16 80.0 17 235.0 18 494.0 19 1050.0 20 2012.0 21 3200.0 22 5043.0 23 7487.0 24 10896.0 25 15581.0 26 20343.0 27 24058.0 28 27435.0 29 31933.0 30 37885.0 31 46644.0 32 59961.0 33 81030.0 34 161022.0 35 271742.0 36 93563.0 37 120343.0 38 184908.0 39 333011.0 40 56.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.9022271080062 24.014703237322482 30.211633374868267 12.871436279803047 2 29.770029784379794 26.309080956762326 30.412273735787167 13.508615523070718 3 28.80838455939312 25.459248903782882 31.187693538406396 14.544672998417605 4 26.216357838512433 27.53318195483449 30.60453784862886 15.645922358024219 5 23.542062076439432 32.21089444693712 29.20362659075665 15.043416885866803 6 21.785387537831095 40.01814204428503 27.048723141625473 11.147747276258402 7 88.8122545158691 3.563736429991124 5.863763246971402 1.7602458071683802 8 89.19295174436989 2.7666292873890717 5.3554094004879005 2.685009567753133 9 84.90009213872884 4.635766319561007 7.609269454810141 2.8548720869000026 10 53.89219573928181 24.885962901662197 11.64902351777745 9.57281784127854 11 47.10340900310311 17.826538940787717 21.042433813030456 14.027618243078718 12 43.40876934734742 19.026420244807213 23.073901234295345 14.490909173550016 13 22.06310236749133 40.73187629904894 23.131106463411705 14.073914870048029 14 14.661875539342716 42.63464818784094 26.68718089903764 16.016295373778707 15 12.991755564198748 24.80155109933386 48.20011311181512 14.006580224652271 16 15.984933142605948 19.743660835975533 45.903852359861794 18.367553661556723 17 16.16486014587658 20.103384978205522 27.453185539089482 36.27856933682841 18 21.978300972229167 23.487389201392926 33.304871405112365 21.229438421265538 19 27.510780361139663 26.3857009004142 24.665972758363424 21.43754598008271 20 30.376431185875436 24.716684771916064 24.926870159713623 19.980013882494877 21 21.82213913792174 28.730076379694676 27.557076988108975 21.890707494274608 22 22.00310505568257 24.431178083579372 26.737113726722633 26.82860313401542 23 18.581310317914326 30.6339521151325 24.71350309628984 26.071234470663327 24 20.272922836574207 24.76720198900179 36.88185399485347 18.078021179570523 25 17.005471832755546 25.868581212919683 34.01354095173657 23.112406002588195 26 16.72600383489311 35.24166774345825 26.050715909481976 21.981612512166663 27 17.641742025844295 33.42863209375684 29.19576979992455 19.733856080474315 28 14.182351569962126 28.619237190022005 39.27973357037899 17.918677669636878 29 14.290918134187494 24.539355054870917 38.8024822264457 22.36724458449589 30 18.4925480611583 29.323036824973425 32.82612662159942 19.35828849226885 31 29.322452435572693 26.230577980596976 22.97747698317413 21.469492600656203 32 29.085904592586438 27.49948216605879 24.567795339040003 18.846817902314765 33 25.224129568220643 28.13075258316348 24.78427914593437 21.860838702681505 34 17.32299007382137 27.1711851871572 29.28979156128719 26.216033177734243 35 18.443784012274776 26.509136928280487 30.315265095265215 24.731813964179526 36 28.160361646134035 22.707878672968548 28.61248424583574 20.519275435061676 37 19.15284315183281 29.232001942770097 30.97166425660149 20.643490648795606 38 18.57481710235061 31.291455123114613 25.165820492458458 24.967907282076325 39 18.347944150554294 30.160466836226167 29.61263423911526 21.87895477410428 40 22.80670541384834 25.708848110052212 26.182917778359283 25.301528697740167 41 16.043242218368135 22.422112256009306 29.27641553722593 32.25822998839662 42 21.766362416229406 24.09060892726235 25.652097406025316 28.49093125048293 43 21.89473328792411 25.689108734738507 26.308171906583404 26.107986070753974 44 19.228748841772674 30.140792393068104 27.528701636095526 23.1017571290637 45 16.955279276448003 35.49087735679375 22.74378615503591 24.81005721172233 46 22.083231335738855 30.880499510086885 26.25784948596459 20.778419668209672 47 19.99903900409657 26.087272713105712 28.14854399380807 25.76514428898965 48 21.7494151236081 22.433735111868362 31.78584855613612 24.03100120838742 49 19.805606112453404 21.821554748521006 32.29978656800442 26.073052571021165 50 18.142109217184423 29.34667212962536 29.412253606818915 23.0989650463713 51 16.65392914213584 31.762018455017277 25.11958879764478 26.464463605202106 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 705.0 1 1141.0 2 1577.0 3 5214.0 4 8851.0 5 6671.5 6 4492.0 7 4527.5 8 4563.0 9 4869.5 10 5176.0 11 5281.0 12 5386.0 13 5223.0 14 5060.0 15 4813.0 16 4566.0 17 4293.5 18 4021.0 19 4184.5 20 4348.0 21 4126.5 22 3905.0 23 5085.0 24 6265.0 25 6440.0 26 8794.5 27 10974.0 28 12720.5 29 14467.0 30 18420.5 31 22374.0 32 24018.0 33 25662.0 34 30807.5 35 35953.0 36 37753.0 37 39553.0 38 51871.5 39 64190.0 40 84109.5 41 104029.0 42 129333.5 43 154638.0 44 163869.5 45 173101.0 46 164111.5 47 155122.0 48 147409.5 49 139697.0 50 133436.5 51 127176.0 52 113167.5 53 99159.0 54 86307.0 55 73455.0 56 66745.5 57 60036.0 58 54558.5 59 49081.0 60 44533.5 61 39986.0 62 34590.0 63 29194.0 64 25861.0 65 22528.0 66 18523.0 67 14518.0 68 11540.0 69 8562.0 70 6911.5 71 5261.0 72 3946.5 73 2632.0 74 2162.5 75 1214.0 76 735.0 77 559.5 78 384.0 79 308.5 80 233.0 81 158.5 82 84.0 83 58.5 84 33.0 85 23.5 86 14.0 87 9.0 88 4.0 89 6.5 90 9.0 91 5.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1540069.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.197427085586952 #Duplication Level Percentage of deduplicated Percentage of total 1 77.00386610105193 14.012722386821933 2 9.525222170435299 3.466690718410253 3 3.464032494377905 1.8910943621563745 4 1.6888815057073947 1.2293319222522647 5 0.9999264495352705 0.9098044328183964 6 0.6198090892384777 0.6767358425040751 7 0.43543543716748007 0.5546663232835128 8 0.34056080905932484 0.49578643928524513 9 0.23510818182227006 0.38505275963421115 >10 2.3222747902296614 10.036755510795386 >50 1.6887617096094327 23.239980795274757 >100 1.6674535370763022 41.290371916379016 >500 0.006139638321485182 0.7160955076509787 >1k 0.0021669311722888876 0.7120208085435668 >5k 3.611551953814813E-4 0.38289027419003324 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5826 0.3782947387422252 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4166 0.2705073603845023 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1544 0.10025524830380977 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09765796207832246 0.0 2 0.0 0.0 0.0 0.37842460305349956 0.0 3 0.0 0.0 0.0 0.5517934586047768 0.0 4 0.0 0.0 0.0 0.9882674087979175 0.0 5 0.0 0.0 0.0 1.6242778732641199 0.0 6 0.0 0.0 0.0 2.285352149806275 0.0 7 0.0 0.0 0.0 2.640790769764212 0.0 8 0.0 0.0 0.0 3.584060194705562 0.0 9 0.0 0.0 0.0 3.857359637782463 0.0 10 0.0 0.0 0.0 4.387595620715695 0.0 11 6.493215563718248E-5 0.0 0.0 5.065941850657341 0.0 12 6.493215563718248E-5 0.0 0.0 5.665590307966721 0.0 13 6.493215563718248E-5 0.0 0.0 5.885060994020398 0.0 14 6.493215563718248E-5 0.0 0.0 5.9572006189333075 0.0 15 6.493215563718248E-5 0.0 0.0 6.096869685708887 0.0 16 6.493215563718248E-5 0.0 0.0 6.4149073840198065 0.0 17 6.493215563718248E-5 0.0 0.0 6.773397815292691 0.0 18 6.493215563718248E-5 0.0 0.0 7.336554401133975 0.0 19 6.493215563718248E-5 0.0 0.0 7.5711542794511155 0.0 20 1.2986431127436497E-4 0.0 0.0 7.830882901999845 0.0 21 1.2986431127436497E-4 0.0 0.0 8.144505213727436 0.0 22 1.2986431127436497E-4 0.0 0.0 8.45416666396116 0.0 23 1.2986431127436497E-4 0.0 0.0 8.785710250644614 0.0 24 1.2986431127436497E-4 0.0 0.0 9.028361716260765 0.0 25 1.2986431127436497E-4 0.0 0.0 9.22088555772501 0.0 26 1.2986431127436497E-4 0.0 0.0 9.422824561756649 0.0 27 1.2986431127436497E-4 0.0 0.0 9.615348403220894 0.0 28 1.2986431127436497E-4 0.0 0.0 9.826702569819924 0.0 29 1.2986431127436497E-4 0.0 0.0 10.05656240077555 0.0 30 1.2986431127436497E-4 0.0 0.0 10.384145125965135 0.0 31 1.2986431127436497E-4 0.0 0.0 10.653613571859443 0.0 32 1.2986431127436497E-4 0.0 0.0 10.88412272437144 0.0 33 1.2986431127436497E-4 0.0 0.0 11.106190696650605 0.0 34 1.9479646691154747E-4 0.0 0.0 11.38169783301917 0.0 35 1.9479646691154747E-4 0.0 0.0 11.723500700293298 0.0 36 1.9479646691154747E-4 0.0 0.0 11.981476154639825 0.0 37 1.9479646691154747E-4 0.0 0.0 12.225036670434896 0.0 38 1.9479646691154747E-4 0.0 0.0 12.485414614539998 0.0 39 1.9479646691154747E-4 0.0 0.0 12.822217705830063 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTTTCG 30 2.1659853E-6 45.000004 11 ACGGGTC 30 2.1659853E-6 45.000004 5 ATATCCG 30 2.1659853E-6 45.000004 1 AATCGAC 30 2.1659853E-6 45.000004 29 CGGACGT 30 2.1659853E-6 45.000004 33 ATCTCGA 20 7.034035E-4 45.0 44 GATCGAC 20 7.034035E-4 45.0 41 CGCATCG 50 2.1827873E-11 45.0 21 CCCGTAT 25 3.8914266E-5 45.0 34 CATAGTA 40 6.8175723E-9 45.0 40 CTCGCTA 20 7.034035E-4 45.0 28 GCGATAC 100 0.0 45.0 9 TCCGTAA 20 7.034035E-4 45.0 23 TTACGAA 40 6.8175723E-9 45.0 31 TGTACGA 20 7.034035E-4 45.0 15 CCCGGTA 20 7.034035E-4 45.0 17 CGTCCAC 20 7.034035E-4 45.0 23 TATCGTG 25 3.8914266E-5 45.0 1 CGTCAAA 20 7.034035E-4 45.0 27 TAATGCG 80 0.0 45.0 1 >>END_MODULE