SRR1547864_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1547864_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2234832
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8239	0.3686630583417456	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5538	0.24780386176679053	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	3068	0.13728101262197784	No Hit
AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	2300	0.10291601337371221	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCTCGA	20	7.034717E-4	45.000004	24
GTCGCAA	40	6.8193913E-9	45.000004	27
TAAGTCG	20	7.034717E-4	45.000004	1
CGCTATA	20	7.034717E-4	45.000004	20
TCGCTAG	20	7.034717E-4	45.000004	33
GCGATAT	150	0.0	45.000004	9
TTACGAA	40	6.8193913E-9	45.000004	32
CCGAAAC	20	7.034717E-4	45.000004	23
CACGTAT	20	7.034717E-4	45.000004	14
CGACTCG	20	7.034717E-4	45.000004	22
ATCGATA	20	7.034717E-4	45.000004	29
GTCGGTT	20	7.034717E-4	45.000004	42
GTTGCGA	20	7.034717E-4	45.000004	13
TACCCGC	25	3.8919923E-5	45.0	21
CGTGCAC	25	3.8919923E-5	45.0	45
CGTGTAA	25	3.8919923E-5	45.0	41
CAATACG	25	3.8919923E-5	45.0	1
TAGTACG	50	2.1827873E-11	45.0	1
CGACCGT	30	2.1664255E-6	44.999996	25
TACGCCT	30	2.1664255E-6	44.999996	24