##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547864_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2234832 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.589753502724143 31.0 31.0 33.0 30.0 34.0 2 32.00787307502309 31.0 31.0 34.0 30.0 34.0 3 32.09414577919056 33.0 31.0 34.0 30.0 34.0 4 35.83716494125733 37.0 35.0 37.0 35.0 37.0 5 35.75903602597421 37.0 35.0 37.0 35.0 37.0 6 35.801645940276494 37.0 35.0 37.0 35.0 37.0 7 36.07582851865375 37.0 35.0 37.0 35.0 37.0 8 36.09271658898745 37.0 35.0 37.0 35.0 37.0 9 37.840361154663974 39.0 38.0 39.0 35.0 39.0 10 37.45942692784066 39.0 37.0 39.0 35.0 39.0 11 37.153402582386505 39.0 37.0 39.0 34.0 39.0 12 36.278919847218944 38.0 35.0 39.0 33.0 39.0 13 35.95649113669394 38.0 35.0 39.0 32.0 39.0 14 36.99340934799573 39.0 35.0 41.0 32.0 41.0 15 37.224929211681236 39.0 35.0 41.0 33.0 41.0 16 37.3751776419883 39.0 35.0 41.0 33.0 41.0 17 37.29200942173729 39.0 35.0 41.0 33.0 41.0 18 37.23830068658405 38.0 35.0 41.0 33.0 41.0 19 37.13866545673232 38.0 35.0 41.0 32.0 41.0 20 37.00773033498715 38.0 35.0 41.0 32.0 41.0 21 36.88214281878906 38.0 35.0 41.0 32.0 41.0 22 36.75996942946942 38.0 35.0 41.0 32.0 41.0 23 36.71197700766769 38.0 35.0 41.0 32.0 41.0 24 36.73009380570888 38.0 35.0 41.0 32.0 41.0 25 36.698404175347406 38.0 35.0 41.0 32.0 41.0 26 36.57302875562906 38.0 35.0 40.0 32.0 41.0 27 36.49526765322852 38.0 35.0 40.0 31.0 41.0 28 36.46942320496574 38.0 35.0 40.0 31.0 41.0 29 36.54328781760777 38.0 35.0 40.0 32.0 41.0 30 36.47721528956092 38.0 35.0 40.0 31.0 41.0 31 36.31481561030091 38.0 35.0 40.0 31.0 41.0 32 36.12447736563643 38.0 35.0 40.0 31.0 41.0 33 36.040397220014746 38.0 35.0 40.0 30.0 41.0 34 35.94093157785462 37.0 35.0 40.0 30.0 41.0 35 35.83018589316781 37.0 35.0 40.0 30.0 41.0 36 35.66236343492486 37.0 35.0 40.0 30.0 41.0 37 35.551049027398925 37.0 35.0 40.0 30.0 41.0 38 35.444641028945355 37.0 34.0 40.0 29.0 41.0 39 35.37083145399744 37.0 35.0 40.0 29.0 41.0 40 35.15388718257122 37.0 34.0 40.0 27.0 41.0 41 35.1024815288129 36.0 34.0 40.0 27.0 41.0 42 35.04527901873608 36.0 34.0 40.0 27.0 41.0 43 34.95905061320045 36.0 34.0 40.0 27.0 41.0 44 34.77601537833716 36.0 34.0 40.0 27.0 41.0 45 34.63638609076656 36.0 34.0 40.0 26.0 41.0 46 34.57547278721622 35.0 34.0 40.0 26.0 41.0 47 34.501821165975784 35.0 34.0 40.0 26.0 41.0 48 34.42112606227224 35.0 34.0 40.0 25.0 41.0 49 34.2960576007503 36.0 34.0 40.0 24.0 41.0 50 34.203880649641675 35.0 34.0 40.0 24.0 41.0 51 33.850136833551694 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 3.0 11 7.0 12 2.0 13 5.0 14 20.0 15 47.0 16 117.0 17 280.0 18 648.0 19 1317.0 20 2342.0 21 3777.0 22 6204.0 23 9603.0 24 14450.0 25 20902.0 26 27695.0 27 33107.0 28 37338.0 29 43033.0 30 52024.0 31 63139.0 32 79399.0 33 107566.0 34 211089.0 35 362539.0 36 143505.0 37 181863.0 38 293119.0 39 539575.0 40 114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.48518725344903 23.862867544406022 28.74019165646456 12.91175354568039 2 29.716148685896748 26.836066424679792 29.811144640849964 13.636640248573496 3 29.957061649376776 25.64935529829535 30.792113232672524 13.601469819655348 4 26.926811500819746 28.193752371542917 29.859783643692232 15.019652483945102 5 24.25819927403939 32.750291744524866 28.2378720190153 14.75363696242044 6 21.856363252360804 41.730743071515 25.17504671492085 11.237846961203347 7 87.61213370848458 4.507855624046908 5.975348482570502 1.9046621848980145 8 88.06849910865783 3.6167819326016453 5.429669881225972 2.885049077514551 9 83.1534540403932 6.336225720770063 7.3116905431817685 3.1986296956549753 10 49.8284434803153 28.595974999463046 11.797486343492485 9.778095176729169 11 44.9630218289339 19.844489429183042 21.579340192014435 13.613148549868626 12 40.86490617639268 21.566140094646936 23.480959642604006 14.087994086356378 13 21.873903720727107 39.21283568518797 23.335355856726594 15.577904737358333 14 15.322941500748154 42.30273237540898 26.789977949125483 15.584348174717382 15 14.360676775703945 26.09923251501679 44.81271970331551 14.72737100596376 16 16.233613980827194 21.98308418708878 43.76445298796509 18.01884884411893 17 16.685146802981162 23.150778224045474 26.0229851729347 34.14108980003866 18 22.04863721299856 26.079409995919157 31.98499931985939 19.886953471222892 19 27.260214638057807 26.722232364669917 25.253441869455962 20.76411112781632 20 30.75439227646642 24.519382217544763 25.027026640033796 19.699198865955026 21 22.36861652240526 29.094849187768922 27.708436249346708 20.828098040479105 22 22.785694853125424 25.440391045053946 26.280006729812357 25.49390737200828 23 20.531431445406188 30.036038503117908 25.12144089578098 24.311089155694926 24 20.885775754061157 25.29071536473435 35.371294128596695 18.4522147526078 25 17.75502588114006 27.438930532585893 32.511079132570146 22.2949644537039 26 17.796639747417256 35.22094725688552 26.663301760490278 20.31911123520694 27 19.324987292109654 33.87990685653329 28.313090200963654 18.482015650393407 28 15.37019337471452 30.27404297056781 36.40510785598202 17.950655798735653 29 16.699286568296856 24.817704418050216 36.59885843768122 21.884150575971706 30 19.338724342590403 29.97742112158766 31.715046142170866 18.968808393651067 31 29.285064828139205 26.962653121129463 23.845371822132492 19.90691022859884 32 28.259394889638234 28.223016316215265 26.068402457097445 17.44918633704905 33 26.624283167593806 28.785250971885134 25.098799372838766 19.491666487682295 34 19.58138240368851 28.60219470635824 28.8328160685009 22.98360682145235 35 20.716680269478868 26.03350050473593 31.246823027413246 22.002996198371957 36 28.341235493316724 25.034409745341037 28.641705506275194 17.98264925506705 37 21.104091940691738 31.004836157706713 29.4988616593999 18.39221024220165 38 20.325688910844306 30.409623631664484 25.539861609284277 23.724825848206933 39 20.898215167851543 29.686750502946087 28.992649111879548 20.422385217322823 40 23.55116626216199 26.726617481761494 27.197480615992614 22.524735640083907 41 17.485788640935873 25.140189508652107 29.551035603571098 27.822986246840927 42 23.3337897434796 25.45041416983469 26.256291300643632 24.959504786042082 43 23.397329195214674 26.33285186537512 26.682318849918023 23.587500089492185 44 20.255840260028492 30.664318391718037 27.149199581892507 21.93064176636096 45 19.50513506160642 34.593920258882996 22.76649877932659 23.134445900183994 46 23.163978321412973 31.059784359629717 26.320725674234126 19.455511644723185 47 22.75692311547356 27.18522018657331 27.495444847755895 22.562411850197243 48 23.755700652219048 23.57098878125962 30.239230510391835 22.4340800561295 49 21.020774715951802 23.255394588944494 31.546219134145208 24.177611560958496 50 19.02662034551143 29.653683140388182 29.08813727385325 22.231559240247144 51 18.511950786457327 31.138582228999763 25.186143745928106 25.163323238614804 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1201.0 1 2192.0 2 3183.0 3 8370.5 4 13558.0 5 10319.0 6 7080.0 7 7139.5 8 7199.0 9 7674.0 10 8149.0 11 8625.0 12 9101.0 13 8866.5 14 8632.0 15 8419.0 16 8206.0 17 8001.5 18 7797.0 19 8093.5 20 8390.0 21 9486.5 22 10583.0 23 10295.0 24 10007.0 25 10771.5 26 15432.0 27 19328.0 28 23950.0 29 28572.0 30 34770.0 31 40968.0 32 42646.5 33 44325.0 34 49442.0 35 54559.0 36 57228.0 37 59897.0 38 74536.0 39 89175.0 40 120131.0 41 151087.0 42 184175.5 43 217264.0 44 223154.5 45 229045.0 46 222341.0 47 215637.0 48 209676.5 49 203716.0 50 188532.5 51 173349.0 52 155570.5 53 137792.0 54 121561.0 55 105330.0 56 95593.5 57 85857.0 58 81004.5 59 76152.0 60 69678.0 61 63204.0 62 55434.0 63 47664.0 64 40283.5 65 32903.0 66 25943.0 67 18983.0 68 14308.0 69 9633.0 70 7723.5 71 5814.0 72 5056.5 73 4299.0 74 3224.0 75 1967.0 76 1785.0 77 1356.5 78 928.0 79 759.0 80 590.0 81 347.5 82 105.0 83 73.5 84 42.0 85 34.5 86 27.0 87 20.0 88 13.0 89 11.5 90 10.0 91 6.5 92 3.0 93 4.0 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2234832.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.354250204584517 #Duplication Level Percentage of deduplicated Percentage of total 1 78.34777185051297 13.596668356655057 2 9.173774117000292 3.1840794269352894 3 3.261500759612019 1.6980270067424832 4 1.5664840192684413 1.087406224474709 5 0.9161557943200939 0.794959844050539 6 0.5718071934879615 0.5953971062742813 7 0.3942744814842529 0.4789636600672385 8 0.2904555512160913 0.4032510647291649 9 0.23026579803061895 0.35964812453235173 >10 2.1061976157399536 8.549357308535626 >50 1.1973793516949056 15.521298389306299 >100 1.9300743778061218 51.084108370144406 >500 0.0107211826958708 1.1845546938496583 >1k 0.0026149226087489753 0.8370798713845458 >5k 5.22984521749795E-4 0.6252005523183826 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8239 0.3686630583417456 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5538 0.24780386176679053 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3068 0.13728101262197784 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2300 0.10291601337371221 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12658669644966603 0.0 2 0.0 0.0 0.0 0.4644644429648403 0.0 3 0.0 0.0 0.0 0.6615709816218848 0.0 4 0.0 0.0 0.0 1.078336089692648 0.0 5 0.0 0.0 0.0 1.7104641422710969 0.0 6 0.0 0.0 0.0 2.3782995768809467 0.0 7 0.0 0.0 0.0 2.7040063861623604 0.0 8 0.0 0.0 0.0 3.4997709000050117 0.0 9 0.0 0.0 0.0 3.7648914996742486 0.0 10 0.0 0.0 0.0 4.2866756874789695 0.0 11 0.0 0.0 0.0 4.936612684980347 0.0 12 0.0 0.0 0.0 5.430833279638022 0.0 13 0.0 0.0 0.0 5.616619056823958 0.0 14 0.0 0.0 0.0 5.6938060668542425 0.0 15 0.0 0.0 0.0 5.823211767148493 0.0 16 0.0 0.0 0.0 6.12059429970575 0.0 17 0.0 0.0 0.0 6.451402163563078 0.0 18 0.0 0.0 0.0 6.9055750051905465 0.0 19 0.0 0.0 0.0 7.113241621741589 0.0 20 0.0 0.0 0.0 7.329052027176987 0.0 21 0.0 0.0 0.0 7.61565075137639 0.0 22 0.0 0.0 0.0 7.898580295968556 0.0 23 0.0 0.0 0.0 8.204822554894507 0.0 24 0.0 0.0 0.0 8.420990929072074 0.0 25 0.0 0.0 0.0 8.593397624519428 0.0 26 0.0 0.0 0.0 8.774306077593305 0.0 27 0.0 0.0 0.0 8.947697187081625 0.0 28 0.0 0.0 0.0 9.126323589424171 0.0 29 0.0 0.0 0.0 9.325622686627003 0.0 30 0.0 0.0 0.0 9.57517164601187 0.0 31 0.0 0.0 0.0 9.805390293319586 0.0 32 0.0 0.0 0.0 9.998917144554937 0.0 33 0.0 0.0 0.0 10.194994523078245 0.0 34 0.0 0.0 0.0 10.40122926466061 0.0 35 0.0 0.0 0.0 10.681474043686505 0.0 36 0.0 0.0 0.0 10.905249253635173 0.0 37 0.0 0.0 0.0 11.11457147561875 0.0 38 0.0 0.0 0.0 11.3157051626252 0.0 39 0.0 0.0 0.0 11.540196310058207 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGA 20 7.034717E-4 45.000004 24 GTCGCAA 40 6.8193913E-9 45.000004 27 TAAGTCG 20 7.034717E-4 45.000004 1 CGCTATA 20 7.034717E-4 45.000004 20 TCGCTAG 20 7.034717E-4 45.000004 33 GCGATAT 150 0.0 45.000004 9 TTACGAA 40 6.8193913E-9 45.000004 32 CCGAAAC 20 7.034717E-4 45.000004 23 CACGTAT 20 7.034717E-4 45.000004 14 CGACTCG 20 7.034717E-4 45.000004 22 ATCGATA 20 7.034717E-4 45.000004 29 GTCGGTT 20 7.034717E-4 45.000004 42 GTTGCGA 20 7.034717E-4 45.000004 13 TACCCGC 25 3.8919923E-5 45.0 21 CGTGCAC 25 3.8919923E-5 45.0 45 CGTGTAA 25 3.8919923E-5 45.0 41 CAATACG 25 3.8919923E-5 45.0 1 TAGTACG 50 2.1827873E-11 45.0 1 CGACCGT 30 2.1664255E-6 44.999996 25 TACGCCT 30 2.1664255E-6 44.999996 24 >>END_MODULE