##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547859_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2711098 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.40392933047791 31.0 31.0 33.0 30.0 34.0 2 31.774603500131683 31.0 31.0 34.0 30.0 34.0 3 31.620448246430044 31.0 31.0 34.0 30.0 34.0 4 35.54110437911134 37.0 35.0 37.0 33.0 37.0 5 35.54328393883216 37.0 35.0 37.0 33.0 37.0 6 35.613842066941146 37.0 35.0 37.0 33.0 37.0 7 35.90393781412549 37.0 35.0 37.0 35.0 37.0 8 35.904211135119425 37.0 35.0 37.0 35.0 37.0 9 37.64796440409015 39.0 37.0 39.0 35.0 39.0 10 37.272338735080766 39.0 37.0 39.0 34.0 39.0 11 37.0142141671013 39.0 37.0 39.0 33.0 39.0 12 36.60281295622659 39.0 35.0 39.0 32.0 39.0 13 36.48636530291417 39.0 35.0 39.0 32.0 39.0 14 37.58103358860506 40.0 36.0 41.0 32.0 41.0 15 37.6880204994434 40.0 36.0 41.0 33.0 41.0 16 37.75978662519761 40.0 36.0 41.0 33.0 41.0 17 37.64898391721731 40.0 36.0 41.0 32.0 41.0 18 37.45732872806516 39.0 36.0 41.0 32.0 41.0 19 37.320360975516195 39.0 36.0 41.0 32.0 41.0 20 37.12013250719819 39.0 35.0 41.0 32.0 41.0 21 37.05307812554175 39.0 35.0 41.0 32.0 41.0 22 36.9673412764865 39.0 35.0 41.0 32.0 41.0 23 36.890891808411205 38.0 35.0 41.0 32.0 41.0 24 36.8960240463458 39.0 35.0 41.0 32.0 41.0 25 36.87485992760129 38.0 35.0 41.0 32.0 41.0 26 36.75564439205075 38.0 35.0 41.0 31.0 41.0 27 36.68829566470854 38.0 35.0 41.0 31.0 41.0 28 36.58220396311753 38.0 35.0 41.0 31.0 41.0 29 36.541502372839346 38.0 35.0 41.0 31.0 41.0 30 36.44420415639715 38.0 35.0 40.0 31.0 41.0 31 36.2498035851157 38.0 35.0 40.0 30.0 41.0 32 36.04839293894946 38.0 35.0 40.0 30.0 41.0 33 35.8296841353577 38.0 35.0 40.0 29.0 41.0 34 35.54746563938301 38.0 35.0 40.0 27.0 41.0 35 35.3516578891652 38.0 34.0 40.0 25.0 41.0 36 35.20811457202949 38.0 34.0 40.0 25.0 41.0 37 35.107238838286186 38.0 34.0 40.0 24.0 41.0 38 34.967788696683044 38.0 34.0 40.0 24.0 41.0 39 34.84732016326964 38.0 34.0 40.0 23.0 41.0 40 34.68182153503857 38.0 34.0 40.0 23.0 41.0 41 34.58689542023195 38.0 34.0 40.0 23.0 41.0 42 34.52959096277597 38.0 34.0 40.0 23.0 41.0 43 34.47719079133252 38.0 34.0 40.0 23.0 41.0 44 34.26165634735447 37.0 33.0 40.0 22.0 41.0 45 34.15392767063382 37.0 33.0 40.0 22.0 41.0 46 34.121353414741925 37.0 33.0 40.0 22.0 41.0 47 34.03122092967499 37.0 33.0 40.0 22.0 41.0 48 33.92311417735545 37.0 33.0 40.0 21.0 41.0 49 33.76975638652679 36.0 33.0 40.0 20.0 41.0 50 33.71926024068477 36.0 33.0 40.0 20.0 41.0 51 33.39213447835527 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 6.0 10 4.0 11 5.0 12 11.0 13 22.0 14 31.0 15 72.0 16 252.0 17 605.0 18 1395.0 19 2570.0 20 4316.0 21 6768.0 22 10496.0 23 15634.0 24 24013.0 25 37753.0 26 51970.0 27 58571.0 28 59143.0 29 61177.0 30 66906.0 31 78528.0 32 95667.0 33 122696.0 34 196190.0 35 263701.0 36 205045.0 37 257752.0 38 396360.0 39 693357.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.040449293976092 23.79379129784316 27.318488671379644 17.847270736801104 2 34.48573234903349 26.1987209610276 26.809617357985584 12.505929331953327 3 27.821126348070045 25.8677111635212 33.29171427960184 13.01944820880691 4 24.486462680434272 26.003154441484593 34.98375934768865 14.526623530392483 5 23.258841989481752 29.48657702524955 32.20104916900828 15.053531816260424 6 20.58682496907157 38.65094511522638 30.18813779509262 10.574092120609436 7 82.6936171248697 3.0887854293721584 12.052681238376481 2.164916207381659 8 82.49679650090111 3.345139128131849 11.511756491281393 2.6463078796856476 9 77.34416092667989 4.999376636329635 13.001153038363054 4.65530939862742 10 39.12912775561783 32.12794225808141 17.974672992271028 10.768256994029725 11 29.785348961933504 21.637100540076382 31.03200253181552 17.545547966174592 12 28.458654021359614 20.01078529806005 33.3920426336488 18.138518046931537 13 23.828906221759595 23.960956040689048 34.18205465092004 18.028083086631323 14 18.324014845645564 28.278837577985012 34.11005430272163 19.2870932736478 15 17.20472664580919 25.086072137561978 40.32558026305209 17.38362095357674 16 21.629686569795705 23.951882226315686 36.21783498789051 18.200596215998093 17 21.609067617622085 23.81319303101548 32.04417545953706 22.533563891825377 18 22.068623118751148 25.023957083071142 33.85465962499327 19.052760173184442 19 23.72761884668131 26.615231172019605 30.027538657768922 19.62961132353017 20 24.37104818785599 26.7162972345522 30.58889792991622 18.32375664767559 21 23.420473918685346 26.163384724565468 32.418156776331955 17.997984580417235 22 22.149697281322915 23.02546791004973 32.73581405024827 22.08902075837908 23 20.119375987146167 25.957711598769208 32.66152680574439 21.261385608340237 24 21.05508543033118 24.909243413554215 34.308276572812936 19.727394583301674 25 21.26481595279846 27.033622539649986 31.135650574047858 20.565910933503694 26 19.5346313560041 28.237968527880586 30.201047693591303 22.02635242252401 27 19.627951479437485 26.72994484153653 32.34327936503955 21.298824313986437 28 18.2842523582696 26.32461091410196 34.31779301227768 21.073343715350752 29 19.74639057680689 25.81304696473532 33.14907834390347 21.291484114554322 30 20.876891945624983 25.7089562974116 33.0095038984205 20.404647858542923 31 23.61508141719702 24.90489093348894 30.85963694414588 20.620390705168166 32 24.928386948756557 25.830825739239234 29.804271184590153 19.43651612741406 33 22.93970929859415 26.294180439069336 29.681295180034066 21.08481508230245 34 20.371192778719177 26.81640427605347 32.28109053970015 20.531312405527206 35 21.17367206939771 26.923740860713995 31.00146140051005 20.90112566937824 36 23.595532142327574 26.916621973827574 29.569753657005393 19.918092226839455 37 21.647096490056796 27.873946275641824 29.9387923269465 20.540164907354878 38 21.413464212654798 28.513834616085436 28.653077092749875 21.419624078509887 39 21.637469394319204 27.06586040047243 29.017689511777146 22.278980693431222 40 23.194624465806843 26.097581127646436 29.422507043271768 21.285287363274954 41 19.601984140742974 25.85085452462434 30.223547802403306 24.323613532229377 42 21.345816344521666 26.50671425378205 29.193448558480732 22.954020843215552 43 21.722674724410552 25.463410027966525 29.58804882744925 23.22586642017367 44 21.422796224998137 27.123254120655172 29.383888004048544 22.070061650298143 45 20.489004823875785 27.41645635827255 28.484363162084144 23.610175655767517 46 22.218562368457356 27.36621841040051 28.764876813748526 21.650342407393612 47 20.860809900638046 26.308676410812147 31.016768851587067 21.813744836962737 48 21.407046148829735 25.56967693532288 30.5469960879319 22.476280827915478 49 21.053130502844237 24.670299635055613 31.357516401103908 22.919053460996246 50 19.88109614628464 25.873575945982036 32.07464281999396 22.170685087739358 51 19.429139042557665 26.681182310635766 30.204072298382428 23.685606348424145 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1166.0 1 2460.0 2 3754.0 3 34071.0 4 64388.0 5 45732.5 6 27077.0 7 24055.0 8 21033.0 9 21819.5 10 22606.0 11 23098.0 12 23590.0 13 22722.5 14 21855.0 15 20586.5 16 19318.0 17 18018.5 18 16719.0 19 15846.0 20 14973.0 21 14952.5 22 14932.0 23 16044.0 24 17156.0 25 18710.5 26 23358.0 27 26451.0 28 30936.0 29 35421.0 30 40973.5 31 46526.0 32 53169.5 33 59813.0 34 66895.5 35 73978.0 36 79164.0 37 84350.0 38 94791.5 39 105233.0 40 118684.0 41 132135.0 42 143661.5 43 155188.0 44 168337.5 45 181487.0 46 211557.0 47 241627.0 48 231087.5 49 220548.0 50 209824.5 51 199101.0 52 183012.0 53 166923.0 54 154013.0 55 141103.0 56 133374.0 57 125645.0 58 119576.5 59 113508.0 60 104039.5 61 94571.0 62 82634.0 63 70697.0 64 62173.5 65 53650.0 66 44300.5 67 34951.0 68 29469.5 69 23988.0 70 19507.5 71 15027.0 72 12109.0 73 9191.0 74 7304.0 75 4236.0 76 3055.0 77 2205.0 78 1355.0 79 1044.5 80 734.0 81 502.5 82 271.0 83 205.5 84 140.0 85 104.5 86 69.0 87 56.0 88 43.0 89 35.5 90 28.0 91 28.0 92 28.0 93 17.5 94 7.0 95 5.5 96 4.0 97 3.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2711098.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.085234777058602 #Duplication Level Percentage of deduplicated Percentage of total 1 75.89121306205897 18.278576841154663 2 7.333841317994255 3.53274579923169 3 2.7822291564015242 2.010319273065252 4 1.6109906253357134 1.5520434973940445 5 1.044173486752122 1.2574581788202372 6 0.7760885410121292 1.1215364830837204 7 0.6369235015025021 1.07383164480998 8 0.5221130359711764 1.0060172041222901 9 0.45907734549001006 0.9951287082260164 >10 7.882758497305939 48.1423157548394 >50 1.0088904330659418 14.881452472128126 >100 0.04561030759270434 1.8260916907509546 >500 0.0026549159433525227 0.44256960331571293 >1k 0.002811087469432083 1.3123621842329785 >5k 3.123430521591203E-4 0.5273898018094179 >10k+ 3.123430521591203E-4 2.040160863015549 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 41202 1.5197532512657235 No Hit GAATCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTC 13037 0.4808752763640414 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCG 8729 0.32197286855731516 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGC 5292 0.19519766530018465 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4336 0.15993519968662143 No Hit GAACTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTTCT 3442 0.12695963037854036 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACTGATGCTCGTATGCCGTCTT 3181 0.11733253464094621 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.6885424281969885E-5 0.0 0.0 0.06960279562007718 0.0 2 3.6885424281969885E-5 0.0 0.0 0.26697670095289805 0.0 3 3.6885424281969885E-5 0.0 0.0 0.4372029340141891 0.0 4 3.6885424281969885E-5 0.0 0.0 0.7743357119513938 0.0 5 3.6885424281969885E-5 0.0 0.0 1.7965045896533434 0.0 6 3.6885424281969885E-5 0.0 0.0 2.7147303417287016 0.0 7 3.6885424281969885E-5 0.0 0.0 3.31238487136946 0.0 8 3.6885424281969885E-5 0.0 0.0 4.215008088973545 0.0 9 3.6885424281969885E-5 0.0 0.0 4.778506715729199 0.0 10 3.6885424281969885E-5 0.0 0.0 5.801782156159607 0.0 11 3.6885424281969885E-5 0.0 0.0 6.380145608900896 0.0 12 3.6885424281969885E-5 0.0 0.0 7.013210145852344 0.0 13 3.6885424281969885E-5 0.0 0.0 7.253076059957995 0.0 14 3.6885424281969885E-5 0.0 0.0 7.399843163175953 0.0 15 3.6885424281969885E-5 0.0 0.0 7.542368442601485 0.0 16 3.6885424281969885E-5 0.0 0.0 7.751840767098792 0.0 17 3.6885424281969885E-5 0.0 0.0 7.966034425904191 0.0 18 3.6885424281969885E-5 0.0 0.0 8.255806319063346 0.0 19 3.6885424281969885E-5 0.0 0.0 8.41765956081263 0.0 20 3.6885424281969885E-5 0.0 0.0 8.604779318195064 0.0 21 3.6885424281969885E-5 0.0 0.0 8.808866370747202 0.0 22 3.6885424281969885E-5 0.0 0.0 9.039806012176616 0.0 23 3.6885424281969885E-5 0.0 0.0 9.269823517998981 0.0 24 3.6885424281969885E-5 0.0 0.0 9.453623587196036 0.0 25 3.6885424281969885E-5 0.0 0.0 9.61492354758109 0.0 26 3.6885424281969885E-5 0.0 0.0 9.772866934356486 0.0 27 3.6885424281969885E-5 0.0 0.0 9.953347315368164 0.0 28 3.6885424281969885E-5 0.0 0.0 10.122946496216661 0.0 29 3.6885424281969885E-5 0.0 0.0 10.31895564085105 0.0 30 3.6885424281969885E-5 0.0 0.0 10.555428095922759 0.0 31 3.6885424281969885E-5 0.0 0.0 10.744465895367854 0.0 32 3.6885424281969885E-5 0.0 0.0 10.938483227091016 0.0 33 7.377084856393977E-5 0.0 0.0 11.12973415199303 0.0 34 7.377084856393977E-5 0.0 0.0 11.327144942750133 0.0 35 7.377084856393977E-5 0.0 0.0 11.548494373866234 0.0 36 7.377084856393977E-5 0.0 0.0 11.74896665483874 0.0 37 7.377084856393977E-5 0.0 0.0 11.957996354244663 0.0 38 7.377084856393977E-5 0.0 0.0 12.187571234975644 0.0 39 7.377084856393977E-5 0.0 0.0 12.506076873650455 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 18765 0.0 43.2494 1 GACCGAT 1125 0.0 39.4 9 TACGCGG 150 0.0 39.000004 2 AACGGGA 1060 0.0 37.995285 4 CGGTTTT 1790 0.0 37.960896 1 TACGGGA 895 0.0 37.960896 4 AGGGATT 4590 0.0 37.69608 6 TAATGCG 90 0.0 37.500004 1 TAGGGAT 3525 0.0 37.468086 5 ACGGGAT 1090 0.0 37.362385 5 GGGCGAT 3410 0.0 37.28006 7 TAGGGAC 2885 0.0 37.12305 5 TTAGGGA 3600 0.0 36.75 4 CGACGGT 235 0.0 36.38298 28 CGAGGGA 1680 0.0 36.294643 4 GAGGGAT 4120 0.0 36.152912 5 AGGGATG 4505 0.0 36.009987 6 ACTAACG 50 4.883077E-8 35.999996 1 ATAGGGA 3195 0.0 35.915493 4 AGTACGG 345 0.0 35.869564 2 >>END_MODULE