##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547858_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1407175 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.623711336543074 31.0 31.0 33.0 30.0 34.0 2 32.04841117842486 31.0 31.0 34.0 30.0 34.0 3 32.08701618490948 33.0 31.0 34.0 30.0 34.0 4 35.855086965018565 37.0 35.0 37.0 35.0 37.0 5 35.79123278909873 37.0 35.0 37.0 35.0 37.0 6 35.837725229626734 37.0 35.0 37.0 35.0 37.0 7 36.11104446852737 37.0 35.0 37.0 35.0 37.0 8 36.146802636488 37.0 35.0 37.0 35.0 37.0 9 37.98019649297351 39.0 39.0 39.0 35.0 39.0 10 37.48489562421163 39.0 37.0 39.0 35.0 39.0 11 37.218157656297194 39.0 37.0 39.0 34.0 39.0 12 36.34976317799847 38.0 35.0 39.0 33.0 39.0 13 36.011770391031675 38.0 35.0 39.0 32.0 39.0 14 36.979748787464246 39.0 35.0 41.0 32.0 41.0 15 37.24745394140743 39.0 35.0 41.0 33.0 41.0 16 37.40746957556807 39.0 35.0 41.0 33.0 41.0 17 37.35896103896104 39.0 35.0 41.0 33.0 41.0 18 37.288535541066324 38.0 35.0 41.0 33.0 41.0 19 37.20545276884538 38.0 35.0 41.0 33.0 41.0 20 37.03909819318848 38.0 35.0 41.0 33.0 41.0 21 36.90916836925045 38.0 35.0 41.0 33.0 41.0 22 36.80315525787482 38.0 35.0 41.0 32.0 41.0 23 36.74938937943042 38.0 35.0 41.0 32.0 41.0 24 36.76100342885569 38.0 35.0 41.0 32.0 41.0 25 36.71813882424006 38.0 35.0 41.0 32.0 41.0 26 36.6052587631247 38.0 35.0 40.0 32.0 41.0 27 36.52248938476025 38.0 35.0 40.0 32.0 41.0 28 36.52249151669124 38.0 35.0 40.0 32.0 41.0 29 36.58268303515909 38.0 35.0 40.0 32.0 41.0 30 36.527635155542136 38.0 35.0 40.0 32.0 41.0 31 36.34778261410273 37.0 35.0 40.0 31.0 41.0 32 36.13626308028497 37.0 35.0 40.0 31.0 41.0 33 36.033636896619115 37.0 35.0 40.0 31.0 41.0 34 35.91490326363103 37.0 35.0 40.0 30.0 41.0 35 35.82075221631993 37.0 35.0 40.0 30.0 41.0 36 35.689166592641286 37.0 35.0 40.0 30.0 41.0 37 35.56421909144208 37.0 35.0 40.0 30.0 41.0 38 35.49086858422016 37.0 35.0 40.0 30.0 41.0 39 35.43840034110896 37.0 35.0 40.0 29.0 41.0 40 35.23587044965978 37.0 35.0 40.0 29.0 41.0 41 35.20640005685149 36.0 34.0 40.0 29.0 41.0 42 35.142002238527546 36.0 34.0 40.0 28.0 41.0 43 35.05143070335957 36.0 34.0 40.0 28.0 41.0 44 34.87775649794801 36.0 34.0 40.0 27.0 41.0 45 34.73687068061897 36.0 34.0 40.0 27.0 41.0 46 34.710431893687705 36.0 34.0 40.0 27.0 41.0 47 34.64584149093041 35.0 34.0 40.0 27.0 41.0 48 34.58020359941017 35.0 34.0 40.0 26.0 41.0 49 34.47114466928421 36.0 34.0 40.0 26.0 41.0 50 34.3636356529927 35.0 34.0 40.0 26.0 41.0 51 34.004957450210526 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 3.0 13 4.0 14 11.0 15 15.0 16 67.0 17 170.0 18 373.0 19 748.0 20 1310.0 21 2251.0 22 3692.0 23 5815.0 24 9134.0 25 13570.0 26 17801.0 27 20249.0 28 21888.0 29 25116.0 30 30509.0 31 36875.0 32 48359.0 33 65615.0 34 133146.0 35 237194.0 36 92620.0 37 114047.0 38 181439.0 39 345084.0 40 65.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.142253095741466 24.694440989926626 31.24664665020342 12.916659264128485 2 29.353705118411 27.13884200614707 30.46351733082239 13.04393554461954 3 27.9290777621831 25.272904933643648 33.03142821610674 13.766589088066517 4 25.180308064028996 28.098424147671754 32.11334766464725 14.607920123651999 5 23.151420399026417 32.12450477019561 30.989535772025512 13.734539058752466 6 20.743546467212678 40.322490095403914 27.684189955051785 11.249773482331623 7 88.45211149999112 3.864622381722245 6.12965693677048 1.5536091815161583 8 89.83253682022492 2.507079787517544 5.428606960754704 2.231776431502834 9 86.8553662479791 3.9840105175262495 7.001545649972463 2.159077584522181 10 48.52843462966582 24.385879510366514 14.159503970721483 12.926181889246186 11 42.618437649901395 23.95501625597385 20.726917405439977 12.699628688684777 12 40.28127276280491 21.94197594471192 24.28894771439231 13.487803578090857 13 21.425195871160305 39.157176612716974 24.995469646632436 14.42215786949029 14 14.608488638584397 42.24648675537868 28.372377280722016 14.772647325314903 15 13.242773642226446 25.712793362588165 47.38714090287278 13.657292092312613 16 15.175724412386518 20.89114715653703 46.295734361397834 17.63739406967861 17 15.74409721605344 21.91006804413097 28.99824115692789 33.347593582887704 18 20.424964911969017 26.13910849752163 33.686002096398816 19.74992449411054 19 26.797448789240857 27.71965107396024 25.90587524650452 19.577024890294386 20 29.269067457849946 26.069039032103326 25.932169062128025 18.729724447918702 21 21.28825483681845 29.378790839803155 29.32179721783005 20.01115710554835 22 20.54499262707197 25.41659708280775 27.92673263808695 26.11167765203333 23 18.211309893936434 30.830067333487303 26.880309840638155 24.078312931938104 24 19.16883116883117 25.596176737079613 37.80460852417077 17.430383569918455 25 16.781210581484178 26.957485742711462 34.67649723737275 21.58480643843161 26 15.624922273349087 36.52303373780802 27.80457299198749 20.047470996855402 27 17.01742853589639 35.19548030628742 29.937498889619274 17.849592268196922 28 13.87858652974932 30.94810524632686 38.38364098282019 16.78966724110363 29 14.494146072805444 26.647147653987602 38.29338923730168 20.56531703590527 30 17.679464174676212 30.488674116581095 33.73979782187717 18.092063886865528 31 26.19340167356583 28.388011441363016 26.509851297812993 18.90873558725816 32 26.785865297493206 28.519977970046366 27.49224510100023 17.201911631460195 33 25.538188213974806 28.80231669834953 25.72693517153162 19.932559916144047 34 17.219961980563898 28.76827686677208 30.694121200277152 23.317639952386873 35 17.522198731501057 27.710057384475988 31.73265585303889 23.035088030984063 36 27.695275996233587 25.911347202728873 28.831097766802284 17.56227903423526 37 19.042407660738714 31.16776520333292 31.115746087018316 18.67408104891005 38 18.875619592445858 32.39696555154831 25.554106632082007 23.17330822392382 39 20.077104837706752 30.472542505374246 28.605965853571874 20.84438680334713 40 22.365661698083038 27.264341677474373 27.260362072947576 23.109634551495017 41 16.588341890667472 25.742569332172614 29.86522642883792 27.803862348321996 42 22.19418338159788 26.435020519835838 26.66868015705225 24.702115941514027 43 22.025263382308527 27.325243839607726 27.370085454900778 23.279407323182973 44 18.810240375219855 31.94862046298435 28.154067546680405 21.08707161511539 45 17.190328139712545 36.094515607511504 23.781477072858742 22.93367917991721 46 22.056176381757776 31.576882761561286 26.63599054843925 19.73095030824169 47 20.110149768152503 28.680867695915573 28.51777497468332 22.6912075612486 48 22.337591273295786 24.731039138699877 31.72405706468634 21.207312523317995 49 20.619610211949475 23.859576811697195 31.566933750244285 23.95387922610905 50 18.304119956650737 30.923659104233657 29.010108906141742 21.762112032973864 51 17.462078277399755 32.37983903920976 25.681027590740314 24.47705509265017 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1106.0 1 1495.5 2 1885.0 3 7177.5 4 12470.0 5 9127.5 6 5785.0 7 5738.5 8 5692.0 9 6581.0 10 7470.0 11 7823.0 12 8176.0 13 8415.0 14 8654.0 15 8358.5 16 8063.0 17 7859.5 18 7656.0 19 7615.0 20 7574.0 21 7786.0 22 7998.0 23 8334.0 24 8670.0 25 9146.5 26 12464.5 27 15306.0 28 17406.5 29 19507.0 30 22982.0 31 26457.0 32 30421.0 33 34385.0 34 37097.5 35 39810.0 36 42160.5 37 44511.0 38 52481.0 39 60451.0 40 79091.0 41 97731.0 42 117613.0 43 137495.0 44 140842.0 45 144189.0 46 143992.0 47 143795.0 48 137452.5 49 131110.0 50 119982.0 51 108854.0 52 94626.0 53 80398.0 54 70326.5 55 60255.0 56 51664.5 57 43074.0 58 41488.0 59 39902.0 60 36047.5 61 32193.0 62 27005.5 63 21818.0 64 16826.0 65 11834.0 66 8563.0 67 5292.0 68 4353.0 69 3414.0 70 2619.5 71 1825.0 72 1524.0 73 1223.0 74 958.0 75 476.0 76 259.0 77 286.0 78 313.0 79 226.5 80 140.0 81 94.5 82 49.0 83 40.5 84 32.0 85 24.5 86 17.0 87 13.5 88 10.0 89 8.5 90 7.0 91 5.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1407175.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.218107498540427 #Duplication Level Percentage of deduplicated Percentage of total 1 76.49976177445713 16.231801689431652 2 9.643576770984524 4.09236897194354 3 3.534548334499398 2.2498927956058576 4 1.7331233744893877 1.4709439227259586 5 1.0544901982701214 1.1187143191526319 6 0.6607455391443818 0.8411861927247928 7 0.4788528284093223 0.7112245552418395 8 0.3436483782773135 0.5833254585589698 9 0.2847543501501853 0.5437753570947288 >10 3.0618306996144113 15.590932460181781 >50 1.7129337112634566 26.90867517733622 >100 0.9842850309184372 27.8754607623285 >500 0.006771826838103665 0.9278481464134741 >1k 3.3859134190518327E-4 0.21552802471857704 >5k 3.3859134190518327E-4 0.638322166541519 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8885 0.6314068967967738 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3000 0.21319309965000802 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.062110256364702326 0.0 2 0.0 0.0 0.0 0.2533444667507595 0.0 3 0.0 0.0 0.0 0.39860003197896493 0.0 4 0.0 0.0 0.0 0.7532822854300283 0.0 5 0.0 0.0 0.0 1.2875441931529483 0.0 6 0.0 0.0 0.0 1.9030326718425215 0.0 7 0.0 0.0 0.0 2.213655018032583 0.0 8 0.0 0.0 0.0 2.9554248760815107 0.0 9 0.0 0.0 0.0 3.225327340238421 0.0 10 0.0 0.0 0.0 3.795263559969442 0.0 11 0.0 0.0 0.0 4.593458525059072 0.0 12 0.0 0.0 0.0 5.156501501234743 0.0 13 0.0 0.0 0.0 5.385186632792652 0.0 14 0.0 0.0 0.0 5.471316645051255 0.0 15 0.0 0.0 0.0 5.61024748165651 0.0 16 0.0 0.0 0.0 5.972036171762574 0.0 17 0.0 0.0 0.0 6.371702169239789 0.0 18 0.0 0.0 0.0 6.912573063051859 0.0 19 0.0 0.0 0.0 7.169683941229769 0.0 20 0.0 0.0 0.0 7.441149821450779 0.0 21 0.0 0.0 0.0 7.823333984756693 0.0 22 0.0 0.0 0.0 8.188036313891308 0.0 23 0.0 0.0 0.0 8.582301419510722 0.0 24 0.0 0.0 0.0 8.860518414553983 0.0 25 0.0 0.0 0.0 9.092188249506991 0.0 26 0.0 0.0 0.0 9.297351075736849 0.0 27 0.0 0.0 0.0 9.512249720184057 0.0 28 0.0 0.0 0.0 9.725371755467515 0.0 29 0.0 0.0 0.0 9.980492831382024 0.0 30 0.0 0.0 0.0 10.309591912875087 0.0 31 0.0 0.0 0.0 10.607849059285448 0.0 32 0.0 0.0 0.0 10.870289764954608 0.0 33 0.0 0.0 0.0 11.119796755911667 0.0 34 0.0 0.0 0.0 11.395242240659478 0.0 35 0.0 0.0 0.0 11.74068612645904 0.0 36 0.0 0.0 0.0 12.030557677616502 0.0 37 0.0 0.0 0.0 12.327464601062413 0.0 38 0.0 0.0 0.0 12.602341570877822 0.0 39 0.0 0.0 0.0 12.953683799101036 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGG 30 2.1658507E-6 45.000004 2 CTATACG 30 2.1658507E-6 45.000004 1 CTGAGCG 60 0.0 45.000004 1 GCTAACG 75 0.0 45.000004 1 CTTAACG 25 3.891254E-5 45.0 1 AACCGTC 35 1.2121927E-7 45.0 38 TCGCACC 20 7.033828E-4 45.0 25 TTAATCG 40 6.8175723E-9 45.0 20 GATCGCA 40 6.8175723E-9 45.0 9 CGGCATG 20 7.033828E-4 45.0 44 ACTCTCG 20 7.033828E-4 45.0 37 ATTACCG 20 7.033828E-4 45.0 1 ATAGCCG 40 6.8175723E-9 45.0 1 CCGTGAG 20 7.033828E-4 45.0 1 GCACGAC 85 0.0 45.0 23 TTCGTAG 55 1.8189894E-12 45.0 1 CACGACG 290 0.0 45.0 26 TACGGCA 25 3.891254E-5 45.0 28 TTATCCG 20 7.033828E-4 45.0 28 AATATCG 20 7.033828E-4 45.0 18 >>END_MODULE