##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547857_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2170225 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53720651084565 31.0 31.0 33.0 30.0 34.0 2 31.947102258982362 31.0 31.0 34.0 30.0 34.0 3 32.01115644691219 33.0 31.0 34.0 30.0 34.0 4 35.776143026644704 37.0 35.0 37.0 35.0 37.0 5 35.67706712437651 37.0 35.0 37.0 33.0 37.0 6 35.73530348235782 37.0 35.0 37.0 33.0 37.0 7 36.04101464133903 37.0 35.0 37.0 35.0 37.0 8 36.06163508391987 37.0 35.0 37.0 35.0 37.0 9 37.813283876095795 39.0 38.0 39.0 35.0 39.0 10 37.378111025354514 39.0 37.0 39.0 35.0 39.0 11 37.08632468983631 39.0 37.0 39.0 33.0 39.0 12 36.41327972906035 38.0 35.0 39.0 33.0 39.0 13 36.16571737953438 38.0 35.0 39.0 32.0 39.0 14 37.191612390420346 39.0 35.0 41.0 32.0 41.0 15 37.39353661486712 39.0 35.0 41.0 33.0 41.0 16 37.516840419772144 39.0 35.0 41.0 33.0 41.0 17 37.43930928820745 39.0 35.0 41.0 33.0 41.0 18 37.3581006577659 39.0 35.0 41.0 33.0 41.0 19 37.286472600767205 39.0 35.0 41.0 32.0 41.0 20 37.14507804490318 39.0 35.0 41.0 32.0 41.0 21 37.022773675540556 39.0 35.0 41.0 32.0 41.0 22 36.918610282344 38.0 35.0 41.0 32.0 41.0 23 36.850994712529804 38.0 35.0 41.0 32.0 41.0 24 36.881180061975144 38.0 35.0 41.0 32.0 41.0 25 36.840670437397044 38.0 35.0 41.0 32.0 41.0 26 36.72287804259927 38.0 35.0 41.0 32.0 41.0 27 36.63986130470343 38.0 35.0 41.0 31.0 41.0 28 36.57429344883595 38.0 35.0 41.0 31.0 41.0 29 36.56368533216602 38.0 35.0 41.0 31.0 41.0 30 36.491992765727055 38.0 35.0 40.0 31.0 41.0 31 36.335008121277745 38.0 35.0 40.0 31.0 41.0 32 36.19553272126162 38.0 35.0 40.0 30.0 41.0 33 36.071356656567865 38.0 35.0 40.0 30.0 41.0 34 35.94596735361541 38.0 35.0 40.0 30.0 41.0 35 35.845419253764014 38.0 35.0 40.0 30.0 41.0 36 35.71437800228087 38.0 35.0 40.0 29.0 41.0 37 35.59757214113744 38.0 35.0 40.0 29.0 41.0 38 35.480965798477115 38.0 34.0 40.0 29.0 41.0 39 35.431780114965036 38.0 35.0 40.0 28.0 41.0 40 35.24485341381654 37.0 34.0 40.0 27.0 41.0 41 35.17814328007465 37.0 34.0 40.0 27.0 41.0 42 35.10030849335898 37.0 34.0 40.0 27.0 41.0 43 35.04781347556129 37.0 34.0 40.0 27.0 41.0 44 34.865609326221936 37.0 34.0 40.0 26.0 41.0 45 34.69774101763642 37.0 34.0 40.0 26.0 41.0 46 34.659507193954546 36.0 34.0 40.0 26.0 41.0 47 34.584333882431544 36.0 34.0 40.0 25.0 41.0 48 34.50359755324909 36.0 34.0 40.0 25.0 41.0 49 34.39915170086051 36.0 34.0 40.0 24.0 41.0 50 34.29907682383163 36.0 34.0 40.0 24.0 41.0 51 33.96741029155963 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 2.0 12 3.0 13 18.0 14 22.0 15 62.0 16 156.0 17 330.0 18 816.0 19 1620.0 20 2810.0 21 4775.0 22 7275.0 23 10560.0 24 15534.0 25 22338.0 26 28695.0 27 33385.0 28 36674.0 29 42161.0 30 49928.0 31 60920.0 32 76244.0 33 100728.0 34 184688.0 35 285341.0 36 150170.0 37 196055.0 38 308318.0 39 550492.0 40 100.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.67797117810365 23.09903351035031 29.63582117061595 12.587174140930088 2 30.862698568120816 26.221935513598822 30.02476701724476 12.890598901035608 3 29.768019444988425 25.544724625326864 31.09405706781555 13.59319886186916 4 26.02135723254501 28.00681956939949 30.471034109366542 15.50078908868896 5 23.546406478590928 32.77945835109263 28.93838196500363 14.735753205312813 6 21.672315082537523 41.215818636316506 26.5572463684641 10.554619912681865 7 88.79964059026138 3.8872927922220044 5.778479189945743 1.534587427570874 8 89.29336819914985 3.1599488532295035 5.334239537375157 2.2124434102454815 9 84.52238823163498 5.695215933831745 7.015770254236312 2.7666255802969735 10 46.78630095957793 30.698982824361533 12.121369904042208 10.39334631201834 11 38.911910055409 22.407215841675402 23.424760105519013 15.256113997396584 12 35.67418124848806 22.370537617067356 25.710099183264408 16.245181951180175 13 23.725143706297732 33.959566404405074 25.954037023810894 16.361252865486296 14 17.967722240781487 37.46606918637468 28.073632918245806 16.492575654598028 15 16.457648400511466 26.89375525579145 40.22564480641408 16.422951537283 16 19.592622884723934 23.709707518805654 38.747226670045734 17.950442926424678 17 20.061145733737284 23.581840592565285 27.739888721215543 28.617124952481888 18 22.847078067942263 26.551394440668595 30.960706839152625 19.640820652236517 19 26.868642652259556 27.394025965049707 25.76723611607091 19.97009526661982 20 28.94068587358454 26.679307445080582 25.283922173968136 19.096084507366747 21 23.5630867767167 28.33240793005334 28.744485018834453 19.360020274395513 22 23.947701275213397 24.250480940916262 27.699293852019952 24.102523931850385 23 20.79342003709293 29.620431061295488 26.760312870785285 22.825836030826295 24 20.872259788731583 26.499786888456267 33.70853252542939 18.91942079738276 25 19.93770231197226 27.5541936895944 30.97890771694179 21.52919628149155 26 19.16335863792925 32.41585549885381 26.36772684859865 22.053059014618302 27 19.470008870048037 32.11823658837217 28.860279464110867 19.55147507746893 28 17.443352647766936 29.467175062493524 33.903765738575494 19.18570655116405 29 18.420117729728485 27.195751592576805 33.40589109424138 20.97823958345333 30 20.592657443352646 29.324977824879912 30.78118628252831 19.301178449239135 31 26.638113559653952 27.768042484074236 25.681346404174683 19.912497552097133 32 26.71911898535866 28.13270513426027 26.490248706931308 18.657927173449757 33 25.358476655646307 28.835074704235737 25.355297261804647 20.45115137831331 34 20.95727401536707 28.667488394060527 28.288311119814765 22.08692647075764 35 20.869541176606113 28.298770864772088 29.288714303816427 21.54297365480538 36 27.218514209356172 27.477058830305612 26.5229642087802 18.781462751558017 37 21.33843265099241 31.086500247670173 27.593221900954973 19.98184520038245 38 20.92096441613197 31.613035514750777 25.311476920595794 22.154523148521466 39 21.075234134709532 29.895103042311284 26.824131138476424 22.20553168450276 40 23.97405798937898 26.744461979748646 26.805008697254895 22.476471333617482 41 19.499268509025562 25.968689882385465 28.62127198792752 25.91076962066145 42 22.298056653112006 27.830155859415502 26.156550588072662 23.715236899399834 43 22.57512469905194 28.331255975762883 26.43237452337891 22.661244801806266 44 21.204529484270065 29.894089322535685 26.898685620154595 22.002695573039663 45 20.18104113628771 32.92059579075902 24.707806794226407 22.190556278726863 46 23.11571380847608 30.06185994539737 26.695619117833402 20.12680712829315 47 21.83861120390743 28.993767927288644 27.725834878872007 21.44178598993192 48 22.819246852284902 26.751696252692692 29.315808268727896 21.11324862629451 49 22.403621744289186 25.33446992823325 29.37455793754104 22.88735038993653 50 20.32535796979576 30.11231554331924 27.872271308274488 21.690055178610514 51 19.906369155271918 30.761050121531174 25.77539195244733 23.557188770749576 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1134.0 1 1852.0 2 2570.0 3 9390.5 4 16211.0 5 12123.5 6 8036.0 7 7719.0 8 7402.0 9 8012.0 10 8622.0 11 9074.0 12 9526.0 13 9486.5 14 9447.0 15 9466.0 16 9485.0 17 9182.5 18 8880.0 19 8726.0 20 8572.0 21 8781.0 22 8990.0 23 10657.5 24 12325.0 25 15632.5 26 19588.0 27 20236.0 28 25156.5 29 30077.0 30 36220.5 31 42364.0 32 46755.5 33 51147.0 34 57445.5 35 63744.0 36 69434.0 37 75124.0 38 83016.5 39 90909.0 40 113013.5 41 135118.0 42 156106.5 43 177095.0 44 181421.0 45 185747.0 46 189992.0 47 194237.0 48 186555.0 49 178873.0 50 170792.0 51 162711.0 52 147912.0 53 133113.0 54 119161.5 55 105210.0 56 98035.5 57 90861.0 58 85173.0 59 79485.0 60 73600.0 61 67715.0 62 60480.5 63 53246.0 64 44464.0 65 35682.0 66 29951.5 67 24221.0 68 20098.5 69 15976.0 70 13341.0 71 10706.0 72 9245.0 73 7784.0 74 5975.0 75 3227.0 76 2288.0 77 1639.5 78 991.0 79 834.5 80 678.0 81 492.0 82 306.0 83 203.0 84 100.0 85 85.5 86 71.0 87 60.5 88 50.0 89 40.0 90 30.0 91 21.0 92 12.0 93 9.5 94 7.0 95 5.0 96 3.0 97 2.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2170225.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.489423929081156 #Duplication Level Percentage of deduplicated Percentage of total 1 78.34310778083139 15.268620394623191 2 8.498127256939085 3.312472094275308 3 2.791561634847854 1.6321778437712602 4 1.4323215167693761 1.1166048497225156 5 0.8660117776688052 0.8439035331282261 6 0.5524412719108243 0.6460057286514509 7 0.3958709607322274 0.5400707882446113 8 0.3388895659137847 0.5283809932188833 9 0.2742744636054968 0.48109061647159806 >10 3.22923356920705 15.644265188543253 >50 2.2032746413023157 31.93500856496676 >100 1.0676972931219664 26.49970512648574 >500 0.005750613719836935 0.7125708133632096 >1k 0.001198044524966028 0.3663022124661522 >5k 0.0 0.0 >10k+ 2.3960890499320563E-4 0.4728212520677958 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10125 0.4665414876337707 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3048 0.1404462670921218 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.6078171618150194E-5 0.0 0.0 0.04695365687889504 0.0 2 4.6078171618150194E-5 0.0 0.0 0.15892361391100002 0.0 3 4.6078171618150194E-5 0.0 0.0 0.2308977179785506 0.0 4 4.6078171618150194E-5 0.0 0.0 0.4066398645301754 0.0 5 4.6078171618150194E-5 0.0 0.0 0.7225978873158313 0.0 6 4.6078171618150194E-5 0.0 0.0 1.102650646822334 0.0 7 4.6078171618150194E-5 0.0 0.0 1.316130815929224 0.0 8 4.6078171618150194E-5 0.0 0.0 1.8524807335644922 0.0 9 4.6078171618150194E-5 0.0 0.0 2.0568835028626062 0.0 10 4.6078171618150194E-5 0.0 0.0 2.440530359755325 0.0 11 4.6078171618150194E-5 0.0 0.0 2.9093757559700033 0.0 12 4.6078171618150194E-5 0.0 0.0 3.295649068644956 0.0 13 4.6078171618150194E-5 0.0 0.0 3.443882546740545 0.0 14 4.6078171618150194E-5 0.0 0.0 3.5123547097651167 0.0 15 4.6078171618150194E-5 0.0 0.0 3.6124364985197386 0.0 16 4.6078171618150194E-5 0.0 0.0 3.839279337395892 0.0 17 4.6078171618150194E-5 0.0 0.0 4.093538688384845 0.0 18 4.6078171618150194E-5 0.0 0.0 4.391618380582658 0.0 19 4.6078171618150194E-5 0.0 0.0 4.564641915008813 0.0 20 4.6078171618150194E-5 0.0 0.0 4.747065396445069 0.0 21 4.6078171618150194E-5 0.0 0.0 4.9850591528528145 0.0 22 4.6078171618150194E-5 0.0 0.0 5.236922438917624 0.0 23 4.6078171618150194E-5 0.0 0.0 5.500074877028879 0.0 24 4.6078171618150194E-5 0.0 0.0 5.713462889792533 0.0 25 4.6078171618150194E-5 0.0 0.0 5.888375629255031 0.0 26 4.6078171618150194E-5 0.0 0.0 6.057574675436879 0.0 27 4.6078171618150194E-5 0.0 0.0 6.2330403529587945 0.0 28 4.6078171618150194E-5 0.0 0.0 6.413436394843853 0.0 29 4.6078171618150194E-5 0.0 0.0 6.612309783547789 0.0 30 4.6078171618150194E-5 0.0 0.0 6.869702450206776 0.0 31 4.6078171618150194E-5 0.0 0.0 7.092766879010241 0.0 32 4.6078171618150194E-5 0.0 0.0 7.299473556889263 0.0 33 4.6078171618150194E-5 0.0 0.0 7.51051158290039 0.0 34 4.6078171618150194E-5 0.0 0.0 7.741271066364087 0.0 35 4.6078171618150194E-5 0.0 0.0 8.01045974495732 0.0 36 4.6078171618150194E-5 0.0 0.0 8.237671209206418 0.0 37 4.6078171618150194E-5 0.0 0.0 8.471379695653676 0.0 38 4.6078171618150194E-5 0.0 0.0 8.722413574629359 0.0 39 4.6078171618150194E-5 0.0 0.0 9.059982259903927 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTAA 30 2.1663964E-6 45.000004 33 CGTATAT 20 7.0346746E-4 45.0 18 CCGTAAA 25 3.8919552E-5 45.0 19 CGTAGAC 20 7.0346746E-4 45.0 43 CGCACCT 20 7.0346746E-4 45.0 35 TAAATCG 55 1.8189894E-12 45.0 1 GTAACGT 35 1.2125929E-7 45.0 32 GTACGAC 20 7.0346746E-4 45.0 36 TACGGGA 885 0.0 41.440678 4 TAACGCC 230 0.0 41.08696 12 TAATGCG 50 1.0822987E-9 40.5 1 AGTACGG 340 0.0 40.367645 2 CGTTTTT 5740 0.0 40.178574 1 TACGCGG 185 0.0 40.135136 2 CGTAAGG 345 0.0 39.782608 2 TGTTACG 170 0.0 39.705883 1 GCACGGT 40 3.460118E-7 39.375 3 CGGTCTA 440 0.0 39.375 31 CCAATCG 190 0.0 39.078945 24 TATGGGA 2130 0.0 38.978874 4 >>END_MODULE