##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547856_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2491622 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52204427477362 31.0 31.0 33.0 30.0 34.0 2 31.94906330093409 31.0 31.0 34.0 30.0 34.0 3 32.03810770654618 33.0 31.0 34.0 30.0 34.0 4 35.795733863322766 37.0 35.0 37.0 35.0 37.0 5 35.71600748428132 37.0 35.0 37.0 33.0 37.0 6 35.75239823697174 37.0 35.0 37.0 33.0 37.0 7 36.03134664888976 37.0 35.0 37.0 35.0 37.0 8 36.04663829425169 37.0 35.0 37.0 35.0 37.0 9 37.79032252885871 39.0 38.0 39.0 35.0 39.0 10 37.36594435271482 39.0 37.0 39.0 35.0 39.0 11 37.06967549652395 39.0 37.0 39.0 33.0 39.0 12 36.415952740825055 38.0 35.0 39.0 33.0 39.0 13 36.17551819658038 38.0 35.0 39.0 32.0 39.0 14 37.20272256385599 39.0 35.0 41.0 32.0 41.0 15 37.4178157842562 39.0 35.0 41.0 33.0 41.0 16 37.53423191800361 39.0 35.0 41.0 33.0 41.0 17 37.458216374714944 39.0 35.0 41.0 33.0 41.0 18 37.36630957665328 39.0 35.0 41.0 33.0 41.0 19 37.299734068811404 39.0 35.0 41.0 32.0 41.0 20 37.15472090068236 39.0 35.0 41.0 32.0 41.0 21 37.019185895773916 39.0 35.0 41.0 32.0 41.0 22 36.934229991547674 39.0 35.0 41.0 32.0 41.0 23 36.86118680923511 38.0 35.0 41.0 32.0 41.0 24 36.881593997805446 38.0 35.0 41.0 32.0 41.0 25 36.83706758087703 38.0 35.0 41.0 32.0 41.0 26 36.73170769884035 38.0 35.0 41.0 31.0 41.0 27 36.64863049049976 38.0 35.0 41.0 31.0 41.0 28 36.601482488114165 38.0 35.0 41.0 31.0 41.0 29 36.60083632268458 38.0 35.0 41.0 31.0 41.0 30 36.52635311455751 38.0 35.0 41.0 31.0 41.0 31 36.361988696519774 38.0 35.0 40.0 31.0 41.0 32 36.22179247092858 38.0 35.0 41.0 30.0 41.0 33 36.129576235881686 38.0 35.0 41.0 30.0 41.0 34 35.98930295205292 38.0 35.0 40.0 30.0 41.0 35 35.9107818120084 38.0 35.0 40.0 30.0 41.0 36 35.78154310726105 38.0 35.0 40.0 29.0 41.0 37 35.688030929250104 38.0 35.0 40.0 29.0 41.0 38 35.56769927380638 38.0 35.0 40.0 29.0 41.0 39 35.49872572966525 38.0 35.0 40.0 28.0 41.0 40 35.34578760341657 38.0 34.0 40.0 27.0 41.0 41 35.28723738994117 38.0 34.0 40.0 27.0 41.0 42 35.2162045446701 37.0 34.0 40.0 27.0 41.0 43 35.15049473796587 37.0 34.0 40.0 27.0 41.0 44 34.99276334853361 37.0 34.0 40.0 27.0 41.0 45 34.8492339528227 37.0 34.0 40.0 26.0 41.0 46 34.80893610668071 37.0 34.0 40.0 26.0 41.0 47 34.74206039278831 37.0 34.0 40.0 26.0 41.0 48 34.65744482911132 36.0 34.0 40.0 26.0 41.0 49 34.535704051417106 36.0 34.0 40.0 25.0 41.0 50 34.44808722992492 36.0 34.0 40.0 24.0 41.0 51 34.11213900021753 35.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 4.0 12 14.0 13 9.0 14 51.0 15 83.0 16 219.0 17 462.0 18 1081.0 19 2048.0 20 3560.0 21 5635.0 22 8384.0 23 12289.0 24 17790.0 25 24751.0 26 32354.0 27 37860.0 28 42248.0 29 48088.0 30 56779.0 31 68482.0 32 85676.0 33 114454.0 34 207474.0 35 316070.0 36 169642.0 37 225694.0 38 356821.0 39 653505.0 40 93.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.787468564653864 24.105181283517325 29.320940335251493 12.786409816577313 2 31.216853920859585 25.514263399504415 29.693870097470644 13.575012582165352 3 30.245398379047867 25.50242372237844 30.75767512086504 13.494502777708659 4 26.684184037546625 27.562447273302293 30.252221243832334 15.501147445318752 5 23.893511937203957 32.41242050359164 28.716113439357976 14.977954119846428 6 22.242860273348043 41.11775381659016 26.051303127039333 10.588082783022465 7 88.71353680453937 3.9598703174076966 5.688864522788769 1.6377283552641613 8 89.19595347929983 3.130691573601453 5.41871921182266 2.254635735276057 9 84.23970409636775 5.672770588797177 7.130134506759051 2.9573908080760245 10 46.936935056762216 30.576186917598253 12.358897136082438 10.127980889557083 11 38.058702323225596 22.11334624593939 23.89523772064944 15.932713710185572 12 34.79311869938538 22.32100214237954 26.153124350322805 16.732754807912276 13 24.105783300998308 32.364861122594036 26.785443377847844 16.743912198559812 14 17.885056401011067 35.68635210316814 28.88981554987073 17.538775945950068 15 17.036813770307052 25.98889398151084 40.40042992075042 16.57386232743169 16 20.640610814963104 23.217927920045657 37.8265242480601 18.31493701693114 17 20.948803630727294 23.224309305344068 27.845676430855082 27.981210633073555 18 23.4506678781934 25.0859480290349 31.79157994270399 19.671804150067707 19 27.56260781129722 26.588061913083123 25.556123681682053 20.293206593937605 20 28.70884909508746 25.97681349739246 25.921748965131954 19.39258844238813 21 24.428544939802265 26.484876116842766 29.469598518555383 19.61698042479959 22 24.415742034706707 24.101127699145376 27.94882209259671 23.534308173551207 23 21.14758980294764 28.411211652489825 27.027253732709056 23.413944811853483 24 20.998369736661502 26.150676145900142 33.66826910341938 19.18268501401898 25 20.17244188725256 26.655247063960747 31.405807140890552 21.766503907896144 26 19.273067905163785 32.027008912266794 26.903197997127975 21.796725185441453 27 19.572471265705634 30.954534837146248 29.65610353416369 19.81689036298443 28 17.831998593687164 28.110082508502494 34.28385204497311 19.774066852837226 29 18.825648513297764 25.53067840948587 34.153414924093624 21.490258153122745 30 20.81459386696698 27.827455368430687 31.0828046950942 20.275146069508136 31 26.693495241252485 26.148749689960997 26.271721794076306 20.886033274710208 32 26.825898952569855 27.42566890162312 26.501331261322946 19.247100884484084 33 25.525822135139283 27.239244155012276 26.698030439609216 20.536903270239225 34 20.360632551807615 27.879509813286283 29.225540631765174 22.534317003140924 35 20.98536615907228 27.589337387452833 29.361797254960827 22.063499198514062 36 26.75237255089255 25.6937448778346 27.85137552967505 19.7025070415978 37 21.79652451294779 29.58614910287355 28.696246862485562 19.9210795216931 38 21.360984932706486 30.335500328701542 25.92026398867886 22.38325074991311 39 21.11981672982499 28.867179692585793 28.16482596477315 21.84817761281607 40 23.221660428427747 26.806915334669547 26.791463552657667 23.179960684245042 41 19.49364711019569 25.42624844378481 28.951221332930917 26.12888311308858 42 22.813051096835714 26.541385491057635 26.25534691859359 24.390216493513062 43 22.258713400347244 26.566389283767762 27.757099592153224 23.41779772373177 44 20.798941412461442 28.909682126743142 28.05770698765704 22.23366947313838 45 19.9062297571622 31.65957757637394 25.504350178317576 22.929842488146278 46 22.69208571765701 29.26836414191238 26.890836571518474 21.14871356891214 47 21.714369194043076 27.23073564128106 28.164023274798506 22.890871889877356 48 22.334688006447205 25.73448139404773 29.786420251546986 22.144410347958075 49 22.142885237006254 24.65807413805144 30.256997249181456 22.94204337576085 50 20.442868139709798 28.920558575899552 28.78390060771658 21.85267267667407 51 19.66008487643792 30.69679108628837 26.370934274942186 23.272189762331525 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1079.0 1 2129.0 2 3179.0 3 10431.5 4 17684.0 5 13164.0 6 8644.0 7 8546.0 8 8448.0 9 9031.5 10 9615.0 11 9815.0 12 10015.0 13 10171.0 14 10327.0 15 9998.5 16 9670.0 17 9320.0 18 8970.0 19 8991.5 20 9013.0 21 10338.5 22 11664.0 23 12197.5 24 12731.0 25 15622.0 26 23275.5 27 28038.0 28 32669.5 29 37301.0 30 41589.0 31 45877.0 32 51829.0 33 57781.0 34 64129.5 35 70478.0 36 76672.0 37 82866.0 38 96110.5 39 109355.0 40 128750.5 41 148146.0 42 174402.5 43 200659.0 44 203072.5 45 205486.0 46 204926.5 47 204367.0 48 202556.5 49 200746.0 50 189287.5 51 177829.0 52 164723.0 53 151617.0 54 139281.0 55 126945.0 56 121443.0 57 115941.0 58 109412.5 59 102884.0 60 93390.0 61 83896.0 62 75243.0 63 66590.0 64 57132.5 65 47675.0 66 40047.0 67 32419.0 68 27485.0 69 22551.0 70 17999.5 71 13448.0 72 11036.5 73 8625.0 74 6972.0 75 3849.0 76 2379.0 77 1892.5 78 1406.0 79 1043.5 80 681.0 81 537.0 82 393.0 83 296.0 84 199.0 85 131.5 86 64.0 87 52.5 88 41.0 89 36.0 90 31.0 91 24.5 92 18.0 93 13.0 94 8.0 95 7.5 96 7.0 97 5.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2491622.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.697088280689197 #Duplication Level Percentage of deduplicated Percentage of total 1 78.91933888217099 13.966425072514077 2 7.9170901973837635 2.802188882985591 3 2.6251729115696376 1.3937375030436534 4 1.24935817078747 0.8844000737050491 5 0.7741769273203701 0.6850338713830648 6 0.5407492885077925 0.5741812737865366 7 0.38063632325368235 0.4715308230820156 8 0.3130068379644282 0.44314477151326914 9 0.2558099683091186 0.40743824330221007 >10 3.3611868228452915 15.09479808864998 >50 2.2823704785018 30.076226820044127 >100 1.374414482087078 31.851999463232993 >500 0.005766128705729331 0.6691208758263084 >1k 6.919354446875196E-4 0.2523336335239577 >5k 0.0 0.0 >10k+ 2.3064514822917318E-4 0.42744060340713125 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10472 0.4202884707230872 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3994 0.16029718793621184 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.0134498732151184E-5 0.0 0.0 0.03575983837034671 0.0 2 4.0134498732151184E-5 0.0 0.0 0.13011604488963413 0.0 3 4.0134498732151184E-5 0.0 0.0 0.19718079227105878 0.0 4 4.0134498732151184E-5 0.0 0.0 0.3499728289443583 0.0 5 4.0134498732151184E-5 0.0 0.0 0.6112082811919304 0.0 6 4.0134498732151184E-5 0.0 0.0 0.9457293281244106 0.0 7 4.0134498732151184E-5 0.0 0.0 1.1128895153438203 0.0 8 4.0134498732151184E-5 0.0 0.0 1.5302080331607282 0.0 9 4.0134498732151184E-5 0.0 0.0 1.692351408038619 0.0 10 4.0134498732151184E-5 0.0 0.0 1.9874603772161268 0.0 11 4.0134498732151184E-5 0.0 0.0 2.3519618947015237 0.0 12 4.0134498732151184E-5 0.0 0.0 2.6286089944622417 0.0 13 4.0134498732151184E-5 0.0 0.0 2.74443715780323 0.0 14 4.0134498732151184E-5 0.0 0.0 2.794605281218419 0.0 15 4.0134498732151184E-5 0.0 0.0 2.8697370628450063 0.0 16 4.0134498732151184E-5 0.0 0.0 3.0463288572664715 0.0 17 4.0134498732151184E-5 0.0 0.0 3.2478441754006027 0.0 18 4.0134498732151184E-5 0.0 0.0 3.5059892712457987 0.0 19 4.0134498732151184E-5 0.0 0.0 3.6444131573729885 0.0 20 4.0134498732151184E-5 0.0 0.0 3.7869708968695894 0.0 21 4.0134498732151184E-5 0.0 0.0 3.969502597103413 0.0 22 4.0134498732151184E-5 0.0 0.0 4.157412320167345 0.0 23 4.0134498732151184E-5 0.0 0.0 4.360653421746958 0.0 24 4.0134498732151184E-5 0.0 0.0 4.513605996415187 0.0 25 4.0134498732151184E-5 0.0 0.0 4.642879216831446 0.0 26 4.0134498732151184E-5 0.0 0.0 4.777088980591759 0.0 27 4.0134498732151184E-5 0.0 0.0 4.91218170332418 0.0 28 4.0134498732151184E-5 0.0 0.0 5.048518595517297 0.0 29 4.0134498732151184E-5 0.0 0.0 5.207170269005491 0.0 30 4.0134498732151184E-5 0.0 0.0 5.396645237519977 0.0 31 4.0134498732151184E-5 0.0 0.0 5.567096453635423 0.0 32 4.0134498732151184E-5 0.0 0.0 5.720891852777027 0.0 33 4.0134498732151184E-5 0.0 0.0 5.8858847770649 0.0 34 4.0134498732151184E-5 0.0 0.0 6.066449886860848 0.0 35 4.0134498732151184E-5 0.0 0.0 6.27823963667041 0.0 36 4.0134498732151184E-5 0.0 0.0 6.454670893096947 0.0 37 4.0134498732151184E-5 0.0 0.0 6.635075464897966 0.0 38 4.0134498732151184E-5 0.0 0.0 6.831614105189311 0.0 39 4.0134498732151184E-5 0.0 0.0 7.1204219580658705 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACGT 25 3.8921222E-5 45.0 12 GTATCGA 25 3.8921222E-5 45.0 9 CGTTTTT 5520 0.0 40.597828 1 CGCATCG 140 0.0 40.17857 21 GGCGATT 1305 0.0 40.000004 8 TACGGGT 155 0.0 39.193546 4 ATAGCGG 425 0.0 39.17647 2 ACGGGTA 230 0.0 39.130436 5 GGGCGAT 3505 0.0 38.38802 7 TAGACGG 335 0.0 38.283585 2 CGTTAGG 435 0.0 38.27586 2 TCACGAC 270 0.0 37.500004 25 GTCGTAC 30 1.1403044E-4 37.500004 26 TAAGGGA 2800 0.0 37.285713 4 TAGGGAC 2340 0.0 37.211536 5 TAGGGAT 3425 0.0 37.18248 5 ATTGGGA 2315 0.0 37.12743 4 TTAGGGA 2640 0.0 36.732952 4 GACCGAT 1105 0.0 36.65158 9 ACGGGAT 1220 0.0 36.516396 5 >>END_MODULE