##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547855_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3674748 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.435743621059185 31.0 31.0 33.0 30.0 34.0 2 31.838904327589265 31.0 31.0 34.0 30.0 34.0 3 31.84303359033055 33.0 31.0 34.0 30.0 34.0 4 35.66039059004862 37.0 35.0 37.0 33.0 37.0 5 35.59517115187218 37.0 35.0 37.0 33.0 37.0 6 35.64744113065712 37.0 35.0 37.0 33.0 37.0 7 35.997089596347834 37.0 35.0 37.0 35.0 37.0 8 36.020977765005924 37.0 35.0 37.0 35.0 37.0 9 37.74865351311165 39.0 38.0 39.0 35.0 39.0 10 37.29015540657482 39.0 37.0 39.0 34.0 39.0 11 36.99209006984969 39.0 37.0 39.0 33.0 39.0 12 36.49946744647524 39.0 35.0 39.0 32.0 39.0 13 36.33103385592699 39.0 35.0 39.0 32.0 39.0 14 37.307481220480966 40.0 35.0 41.0 32.0 41.0 15 37.50716947121272 40.0 35.0 41.0 32.0 41.0 16 37.59644389220703 40.0 35.0 41.0 33.0 41.0 17 37.51766243562824 39.0 35.0 41.0 33.0 41.0 18 37.414471414094244 39.0 35.0 41.0 32.0 41.0 19 37.34323333191827 39.0 35.0 41.0 32.0 41.0 20 37.16930548707013 39.0 35.0 41.0 32.0 41.0 21 37.07593636352751 39.0 35.0 41.0 32.0 41.0 22 36.99475120470846 39.0 35.0 41.0 32.0 41.0 23 36.89053643950551 38.0 35.0 41.0 32.0 41.0 24 36.91730371715285 39.0 35.0 41.0 32.0 41.0 25 36.831245571124875 38.0 35.0 41.0 31.0 41.0 26 36.66909213910723 38.0 35.0 41.0 31.0 41.0 27 36.5294572580215 38.0 35.0 41.0 31.0 41.0 28 36.412677005334785 38.0 35.0 40.0 31.0 41.0 29 36.31309004045992 38.0 35.0 40.0 30.0 41.0 30 36.21452001606641 38.0 35.0 40.0 30.0 41.0 31 35.9675637621954 38.0 35.0 40.0 30.0 41.0 32 35.89115743446897 38.0 35.0 40.0 30.0 41.0 33 35.76435336518313 38.0 35.0 40.0 29.0 41.0 34 35.649848370554935 38.0 35.0 40.0 28.0 41.0 35 35.586982835285575 38.0 35.0 40.0 28.0 41.0 36 35.53044725788 38.0 35.0 40.0 27.0 41.0 37 35.465072979153945 38.0 34.0 40.0 27.0 41.0 38 35.379104363074696 38.0 34.0 40.0 27.0 41.0 39 35.30334025625703 38.0 34.0 40.0 26.0 41.0 40 35.144393030488075 38.0 34.0 40.0 25.0 41.0 41 35.046971656287724 38.0 34.0 40.0 25.0 41.0 42 34.958342993859716 38.0 34.0 40.0 25.0 41.0 43 34.88461984331987 38.0 34.0 40.0 24.0 41.0 44 34.69592908139551 37.0 34.0 40.0 24.0 41.0 45 34.577540555161875 37.0 34.0 40.0 23.0 41.0 46 34.552731779158734 37.0 34.0 40.0 23.0 41.0 47 34.46841307213447 37.0 33.0 40.0 23.0 41.0 48 34.36452105015092 37.0 33.0 40.0 23.0 41.0 49 34.23452764652161 36.0 33.0 40.0 23.0 41.0 50 34.13395285880828 36.0 33.0 40.0 23.0 41.0 51 33.77185483195038 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 2.0 11 8.0 12 7.0 13 10.0 14 30.0 15 98.0 16 254.0 17 636.0 18 1353.0 19 2699.0 20 4855.0 21 8023.0 22 12491.0 23 18903.0 24 28672.0 25 42463.0 26 56277.0 27 65313.0 28 71471.0 29 79467.0 30 92328.0 31 110467.0 32 136063.0 33 174506.0 34 287609.0 35 401050.0 36 265861.0 37 344000.0 38 549629.0 39 920090.0 40 111.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.583907250238656 24.295761233151225 29.49200870372608 14.62832281288404 2 30.738869712970796 26.169712861943182 29.90482612685278 13.186591298233239 3 28.392341461237613 24.88453630017623 33.009773731423216 13.713348507162939 4 25.564555719194892 27.517696451566202 32.17015153147916 14.747596297759738 5 22.85032878444998 32.312011599162716 30.3947100590299 14.442949557357402 6 21.571111815014255 39.83026863338656 27.5546513665699 11.043968185029286 7 87.11808265491948 3.055801377400573 7.745646776323166 2.080469191356795 8 87.21128632493983 2.3974977331778944 7.469219658055463 2.921996283826809 9 81.89979285654417 4.791267319554974 9.881004085178086 3.427935738722764 10 42.85733334639546 32.912270446844246 13.967760510380575 10.262635696379725 11 32.10729007812236 22.699352445392172 28.637609980330623 16.555747496154837 12 31.719045768580596 21.006392819317135 28.910825994054555 18.363735418047714 13 24.334022360172725 27.423866888287307 30.472647376092183 17.769463375447785 14 17.559163240581395 31.29240426826547 31.95400065528303 19.194431835870105 15 16.989437098816026 25.397415006416768 40.63598374636846 16.977164148398746 16 21.62847629279613 23.46882017488002 37.08733224700034 17.81537128532351 17 21.173696808597487 23.995169192554155 29.208587908613055 25.622546090235303 18 22.524047907502773 24.566392035589924 32.85672922333722 20.052830833570084 19 24.834682541496722 27.10898815374551 27.83020767682573 20.226121627932038 20 25.254738556222083 27.472795413454204 27.443106302799542 19.829359727524174 21 22.845865893389153 27.219471920251404 30.6927441010921 19.241918085267343 22 21.829197539531965 23.528116757938232 30.504703996029114 24.137981706500693 23 19.28194804106295 27.985157077437687 29.780763197911803 22.952131683587552 24 20.553790355148163 25.74418708439327 33.621734061764236 20.080288498694333 25 21.128768557735114 26.412287318749478 30.547428014111443 21.911516109403966 26 19.120168240107894 29.808819543544214 28.798301271270848 22.27271094507705 27 19.42631168178063 28.189660896475075 31.25822505379961 21.125802367944686 28 18.02142623113204 27.265461468378238 33.77823458914734 20.934877711342384 29 18.455279110295457 25.85668459442661 33.16624704605594 22.52178924922199 30 21.12016932861791 25.652044711637366 32.54761959187405 20.68016636787067 31 23.99617606431788 25.044302357603843 28.59167485770453 22.367846720373752 32 24.5953191892342 25.290795450463545 29.410288814362236 20.70359654594002 33 23.284753131371186 24.729450835812415 28.653257311793894 23.3325387210225 34 18.71004487926791 25.36690951325098 32.91648842315173 23.006557184329374 35 18.688193040720073 25.26739248514456 31.673301135207094 24.371113338928275 36 23.132824346050395 24.38169909882256 30.497710319183792 21.987766235943255 37 19.439999695217196 27.527220914196022 29.942978402872793 23.08980098771399 38 20.02071978813241 26.913165202076446 29.739454242848762 23.326660766942386 39 19.22085541648026 25.996748620585684 29.34446117121501 25.43793479171905 40 22.26492809847097 24.207238156194656 30.010874215048215 23.516959530286158 41 18.2488703987321 23.92974974066249 30.230970940048135 27.590408920557273 42 21.016162196700293 25.49823824654099 29.031051925193236 24.454547631565486 43 20.97909843069511 25.210980453625666 29.222384773051104 24.58753634262812 44 20.821237265793464 27.53737127008437 28.775034369703718 22.866357094418447 45 19.549721504712707 27.583959498719366 27.62268324249717 25.243635754070752 46 21.462995557790627 26.734758410644755 28.636657534067645 23.165588497496973 47 20.45108943524835 25.482509276826605 30.0665515023071 23.99984978561795 48 20.93335379732161 24.24261473167684 30.906037638499296 23.91799383250226 49 21.608121155518692 22.960649274453647 30.726515124302402 24.704714445725255 50 19.052354066183586 26.123859377568202 30.79174408694147 24.032042469306738 51 18.427821445171205 26.924295216978145 28.894062939826075 25.753820398024573 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1600.0 1 2866.0 2 4132.0 3 25356.0 4 46580.0 5 32982.0 6 19384.0 7 17604.5 8 15825.0 9 16429.0 10 17033.0 11 17748.0 12 18463.0 13 17896.0 14 17329.0 15 16743.0 16 16157.0 17 15324.0 18 14491.0 19 14831.5 20 15172.0 21 14989.0 22 14806.0 23 16871.5 24 18937.0 25 23285.5 26 32271.5 27 36909.0 28 40972.0 29 45035.0 30 54092.0 31 63149.0 32 72451.5 33 81754.0 34 90707.5 35 99661.0 36 108996.5 37 118332.0 38 129025.0 39 139718.0 40 170376.5 41 201035.0 42 231099.0 43 261163.0 44 274686.5 45 288210.0 46 311230.5 47 334251.0 48 341590.0 49 348929.0 50 330796.0 51 312663.0 52 276839.0 53 241015.0 54 214853.0 55 188691.0 56 177274.0 57 165857.0 58 155586.0 59 145315.0 60 130187.5 61 115060.0 62 102500.0 63 89940.0 64 72704.5 65 55469.0 66 45911.5 67 36354.0 68 29798.5 69 23243.0 70 19079.0 71 14915.0 72 12358.5 73 9802.0 74 7262.5 75 3715.0 76 2707.0 77 2195.5 78 1684.0 79 1227.0 80 770.0 81 645.5 82 521.0 83 335.0 84 149.0 85 113.0 86 77.0 87 62.5 88 48.0 89 37.5 90 27.0 91 22.0 92 17.0 93 12.0 94 7.0 95 5.0 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3674748.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.33912378314085 #Duplication Level Percentage of deduplicated Percentage of total 1 76.33487702038241 16.28919389708774 2 9.232947720313526 3.9404602857407682 3 3.4695534895215383 2.221116941553851 4 1.7399732395962053 1.4851801735638406 5 1.0191390729819483 1.0873767415298605 6 0.734460375965665 0.9403644525926097 7 0.5152384434105701 0.7696315845239677 8 0.39946437002553625 0.6819375711143436 9 0.3134374577595934 0.601963263846445 >10 3.6094273820381972 18.69928714562976 >50 1.8268400487233747 28.744340351655822 >100 0.7982697035835105 21.98345895309343 >500 0.0032508549479071 0.5018531937948879 >1k 0.0029907865520745315 1.2141484213031688 >5k 0.0 0.0 >10k+ 1.3003419791628398E-4 0.8396870229695399 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30261 0.8234850389741011 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7212750370909786E-5 0.0 0.0 0.09867343284491889 0.0 2 2.7212750370909786E-5 0.0 0.0 0.32935591773912115 0.0 3 2.7212750370909786E-5 0.0 0.0 0.6000683584289317 0.0 4 2.7212750370909786E-5 0.0 0.0 0.9646375751480102 0.0 5 2.7212750370909786E-5 0.0 0.0 1.7122806788383858 0.0 6 2.7212750370909786E-5 0.0 0.0 2.797770078383606 0.0 7 2.7212750370909786E-5 0.0 0.0 3.4237994006663857 0.0 8 2.7212750370909786E-5 0.0 0.0 4.78070877241106 0.0 9 2.7212750370909786E-5 0.0 2.7212750370909786E-5 5.491124833594031 0.0 10 2.7212750370909786E-5 0.0 2.7212750370909786E-5 6.467355040400049 0.0 11 2.7212750370909786E-5 0.0 2.7212750370909786E-5 7.355633638007286 0.0 12 2.7212750370909786E-5 0.0 2.7212750370909786E-5 8.036333375785224 0.0 13 5.442550074181957E-5 0.0 2.7212750370909786E-5 8.338775883407516 0.0 14 0.003047828041541896 0.0 2.7212750370909786E-5 8.51628465407696 0.0 15 0.003047828041541896 0.0 2.7212750370909786E-5 8.686119429141808 0.0 16 0.003047828041541896 0.0 2.7212750370909786E-5 8.99667133637463 0.0 17 0.003047828041541896 0.0 2.7212750370909786E-5 9.385296624421594 0.0 18 0.003047828041541896 0.0 2.7212750370909786E-5 9.87063602728677 0.0 19 0.003047828041541896 0.0 2.7212750370909786E-5 10.142382552490675 0.0 20 0.003047828041541896 0.0 2.7212750370909786E-5 10.443736550098128 0.0 21 0.003047828041541896 0.0 2.7212750370909786E-5 10.788848650302008 0.0 22 0.003047828041541896 0.0 2.7212750370909786E-5 11.176086088080053 0.0 23 0.003047828041541896 0.0 2.7212750370909786E-5 11.568058544422637 0.0 24 0.003047828041541896 0.0 2.7212750370909786E-5 11.859234973391374 0.0 25 0.003047828041541896 0.0 2.7212750370909786E-5 12.115579081885343 0.0 26 0.003047828041541896 0.0 2.7212750370909786E-5 12.360820388227982 0.0 27 0.003047828041541896 0.0 2.7212750370909786E-5 12.634362954956368 0.0 28 0.003047828041541896 0.0 2.7212750370909786E-5 12.899932185826076 0.0 29 0.003047828041541896 0.0 2.7212750370909786E-5 13.206429393253632 0.0 30 0.003047828041541896 0.0 2.7212750370909786E-5 13.614375734063941 0.0 31 0.003047828041541896 0.0 2.7212750370909786E-5 13.928628575347208 0.0 32 0.003047828041541896 0.0 2.7212750370909786E-5 14.207967457904596 0.0 33 0.003047828041541896 0.0 2.7212750370909786E-5 14.48923844573832 0.0 34 0.003047828041541896 0.0 2.7212750370909786E-5 14.781367320970036 0.0 35 0.003047828041541896 0.0 2.7212750370909786E-5 15.133962927525914 0.0 36 0.003047828041541896 0.0 2.7212750370909786E-5 15.424649526987974 0.0 37 0.003047828041541896 0.0 2.7212750370909786E-5 15.733731945700766 0.0 38 0.003047828041541896 0.0 2.7212750370909786E-5 16.080531236427642 0.0 39 0.003047828041541896 0.0 2.7212750370909786E-5 16.651590802961184 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGT 360 0.0 43.75 28 CGTTTTT 13930 0.0 42.657932 1 CGGTCTA 375 0.0 42.0 31 CGCGATT 40 3.460991E-7 39.375 22 CGTTCGA 80 0.0 39.375 14 CTCACGA 420 0.0 39.107143 24 TACGGGA 1250 0.0 38.88 4 TTAGGGA 4640 0.0 38.599136 4 ACGGGAC 1095 0.0 38.21918 5 ATAGGGA 4985 0.0 37.913742 4 TAGGGAC 4055 0.0 37.84217 5 TCGTTAG 125 0.0 37.8 1 ACGGGAT 1690 0.0 37.544376 5 TAAGGGA 4525 0.0 37.44199 4 CGGTTTT 1425 0.0 37.421055 1 AAGGGAT 5890 0.0 37.13073 5 TAGGGAT 5250 0.0 37.071426 5 GGGCGAT 4760 0.0 37.058823 7 GGCGATA 1020 0.0 37.058823 8 GTAGGGA 5120 0.0 36.82617 4 >>END_MODULE