##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547854_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1408292 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.515146006652028 31.0 31.0 33.0 30.0 34.0 2 31.85499527086712 31.0 31.0 34.0 30.0 34.0 3 31.494043138780878 31.0 31.0 34.0 30.0 34.0 4 35.51806443550059 37.0 35.0 37.0 33.0 37.0 5 35.61191571066228 37.0 35.0 37.0 33.0 37.0 6 35.73002473918761 37.0 35.0 37.0 33.0 37.0 7 36.04456817194161 37.0 35.0 37.0 35.0 37.0 8 36.09191559704948 37.0 35.0 37.0 35.0 37.0 9 37.87041039784363 39.0 38.0 39.0 35.0 39.0 10 37.49363626293411 39.0 37.0 39.0 35.0 39.0 11 37.21067221854558 39.0 37.0 39.0 34.0 39.0 12 36.79497220746834 39.0 35.0 39.0 33.0 39.0 13 36.66350018320064 39.0 35.0 39.0 33.0 39.0 14 37.83439726988437 40.0 36.0 41.0 33.0 41.0 15 37.9778362725912 40.0 36.0 41.0 33.0 41.0 16 38.04329712872046 40.0 36.0 41.0 33.0 41.0 17 37.9717970420907 40.0 36.0 41.0 33.0 41.0 18 37.758918604948406 39.0 36.0 41.0 33.0 41.0 19 37.54538973451528 39.0 36.0 41.0 33.0 41.0 20 37.24980685823679 39.0 35.0 41.0 33.0 41.0 21 37.14314218926189 39.0 35.0 41.0 33.0 41.0 22 37.0495671352248 38.0 35.0 41.0 33.0 41.0 23 36.95649836823613 38.0 35.0 41.0 32.0 41.0 24 36.92099081724529 38.0 35.0 41.0 33.0 41.0 25 36.86700059362689 38.0 35.0 41.0 32.0 41.0 26 36.76996460961221 38.0 35.0 41.0 32.0 41.0 27 36.68615528597763 38.0 35.0 41.0 32.0 41.0 28 36.60489230926541 38.0 35.0 41.0 32.0 41.0 29 36.56517753420455 38.0 35.0 40.0 32.0 41.0 30 36.44571935365677 38.0 35.0 40.0 31.0 41.0 31 36.21445126436847 38.0 35.0 40.0 31.0 41.0 32 35.868778633976476 38.0 35.0 40.0 30.0 41.0 33 35.55252106807395 38.0 35.0 40.0 29.0 41.0 34 35.200832639821854 38.0 35.0 40.0 25.0 41.0 35 34.90517662530214 38.0 34.0 40.0 24.0 41.0 36 34.70246440368901 38.0 34.0 40.0 23.0 41.0 37 34.540685454437 38.0 34.0 40.0 22.0 41.0 38 34.39349225870771 37.0 34.0 40.0 21.0 41.0 39 34.27686161676698 37.0 34.0 40.0 21.0 41.0 40 34.12422565774712 37.0 34.0 40.0 20.0 41.0 41 34.031436662283106 37.0 34.0 40.0 19.0 41.0 42 33.93771959224365 37.0 33.0 40.0 18.0 41.0 43 33.855108173589 37.0 33.0 40.0 18.0 41.0 44 33.66554166323461 36.0 33.0 40.0 18.0 41.0 45 33.54720682926552 36.0 33.0 40.0 18.0 41.0 46 33.51962945184663 36.0 33.0 40.0 18.0 41.0 47 33.462420435534675 36.0 33.0 40.0 18.0 41.0 48 33.350774555276885 36.0 33.0 40.0 18.0 41.0 49 33.223073765951945 36.0 33.0 40.0 17.0 41.0 50 33.13229997756147 35.0 33.0 40.0 17.0 41.0 51 32.84593535999637 35.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 10.0 14 11.0 15 31.0 16 98.0 17 208.0 18 531.0 19 1067.0 20 1919.0 21 3255.0 22 5221.0 23 8277.0 24 13884.0 25 23109.0 26 31936.0 27 34843.0 28 32864.0 29 31605.0 30 33230.0 31 37580.0 32 45710.0 33 59640.0 34 101236.0 35 165442.0 36 111990.0 37 126392.0 38 188344.0 39 349790.0 40 66.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.305286119639963 22.83382991595493 27.264516165681552 20.596367798723563 2 37.09507687326208 24.00745015948397 27.15800416390919 11.73946880334476 3 26.972957312830008 23.226646178491393 37.57303172921525 12.22736477946335 4 23.065884063816313 25.501742536349 37.815950101257414 13.616423298577285 5 21.20156899279411 29.879243793190618 35.99743519099732 12.921752023017955 6 18.95203551536187 37.64631198643463 33.27626656971708 10.125385928486422 7 80.90530941026435 3.1212276999372293 14.296182893888485 1.6772799959099391 8 81.47415450772993 2.5484771624066602 13.973522536519415 2.0038457933439937 9 77.16318774799544 4.974252498771562 15.395315744178054 2.4672440090549403 10 38.77377702919565 32.88778179525269 19.535437253069677 8.803003922481984 11 28.36556623200302 23.26896694719561 34.284722202497775 14.080744618303589 12 27.43188202446652 22.318027795371982 34.67540822499879 15.574681955162708 13 20.249280688948033 29.542381835585235 34.987275366188264 15.221062109278474 14 15.324591775001206 33.327037290561904 35.29942653938246 16.048944395054434 15 14.23689121290187 27.165104964027346 43.67070181468048 14.927302008390306 16 17.220363390546847 25.435634087248953 42.11413542077921 15.229867101424988 17 16.91723023350271 25.162395298702258 34.75848758638123 23.1618868814138 18 19.087660797618675 26.75638290922621 37.02506298409705 17.130893309058067 19 21.580467687098984 28.52022165857649 32.779636609453156 17.119674044871378 20 22.864789404470095 28.344618871654458 32.21171461600293 16.578877107872515 21 20.025037421216624 28.862125184265764 34.67320697696216 16.43963041755545 22 19.863423210527362 25.978987312290347 34.030229526263014 20.127359950919267 23 16.51134849874884 30.347257528978368 33.62988641560131 19.511507556671486 24 17.088004476344395 28.26828527038427 38.453175903860846 16.19053434941049 25 16.972332442419614 29.271841351083438 35.98621592681063 17.769610279686315 26 15.798073126879936 32.71090086430939 33.1590323597663 18.331993649044374 27 15.881933576275376 31.32581879326162 35.24176804242302 17.55047958803998 28 14.853382679160287 30.099723636859398 38.93666938390618 16.110224300074133 29 15.387078816040992 27.895990320189277 38.38770652677144 18.329224336998294 30 17.150633533386543 29.36919332070338 36.78512694810451 16.695046197805567 31 21.507755493889054 28.75646527850758 32.61894550277925 17.11683372482411 32 21.421480772453442 29.42067412156002 32.67312460768079 16.484720498305748 33 20.35352043468258 29.70562923030167 32.23358508036686 17.707265254648892 34 17.13330758109824 30.771956384045357 33.590832014951445 18.50390401990496 35 17.63938160551931 29.915244849789673 33.616962959386264 18.828410585304752 36 22.17217736094503 29.967364722656946 30.671835102379337 17.188622814018682 37 18.862352409869544 32.00266706052438 31.60580334192057 17.52917718768551 38 19.042854748873104 32.77771939342125 29.149352549045226 19.03007330866042 39 19.039801404822295 31.70251623952987 30.06997128436432 19.187711071283513 40 20.994296637345098 29.637603565169723 30.110587861040184 19.257511936445 41 17.79332695208096 28.526257338676924 31.188773350981187 22.49164235826093 42 19.84389601020243 30.074515796439943 29.547281387666764 20.534306805690868 43 19.87414541870578 29.852189744740436 30.098800532844038 20.174864303709743 44 18.85312136971594 32.506184796902915 29.9806432188779 18.66005061450324 45 17.568373604337737 33.8811837317829 28.21410616548273 20.33633649839664 46 20.01999585313273 31.90574113891153 29.488202730683692 18.586060277272043 47 18.934354523067658 30.543736668247778 30.697539998807066 19.824368809877495 48 19.99642119674045 29.023384354949116 31.4789120438091 19.50128240450134 49 19.36544409824099 28.123641971977403 31.375453386087543 21.135460543694062 50 17.920431274195977 30.902043042209996 31.762802032533028 19.414723651061003 51 17.310543552047445 32.137014198759914 30.07479982844467 20.477642420747973 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 824.0 1 1358.5 2 1893.0 3 29396.0 4 56899.0 5 38415.0 6 19931.0 7 18124.0 8 16317.0 9 18241.0 10 20165.0 11 21701.5 12 23238.0 13 23180.0 14 23122.0 15 21924.5 16 20727.0 17 19012.5 18 17298.0 19 15873.0 20 14448.0 21 14014.0 22 13580.0 23 13241.0 24 12902.0 25 13613.0 26 16725.0 27 19126.0 28 21079.0 29 23032.0 30 26375.5 31 29719.0 32 32944.5 33 36170.0 34 39924.5 35 43679.0 36 47004.5 37 50330.0 38 55484.5 39 60639.0 40 69459.5 41 78280.0 42 89388.0 43 100496.0 44 103332.5 45 106169.0 46 110665.0 47 115161.0 48 112495.5 49 109830.0 50 102341.5 51 94853.0 52 84515.0 53 74177.0 54 64650.5 55 55124.0 56 49128.0 57 43132.0 58 38855.5 59 34579.0 60 30814.0 61 27049.0 62 22854.5 63 18660.0 64 15645.0 65 12630.0 66 10053.0 67 7476.0 68 5901.5 69 4327.0 70 3690.5 71 3054.0 72 2670.5 73 2287.0 74 1782.5 75 983.0 76 688.0 77 465.5 78 243.0 79 216.0 80 189.0 81 139.5 82 90.0 83 76.0 84 62.0 85 51.0 86 40.0 87 31.0 88 22.0 89 17.5 90 13.0 91 11.0 92 9.0 93 9.0 94 9.0 95 5.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1408292.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.988082388438364 #Duplication Level Percentage of deduplicated Percentage of total 1 74.62297861011207 21.63177052020602 2 8.498125747336664 4.926887386222091 3 3.593564980305615 3.1251167315191815 4 2.0136783940667646 2.3349070076410245 5 1.2689826963985193 1.839268747635147 6 0.9040369264124125 1.572377814302016 7 0.7369023354570337 1.4952969928722795 8 0.6024488444691213 1.3971069390632298 9 0.4983989344955588 1.3002866437920435 >10 6.751298057778767 46.10219848678179 >50 0.4681784015033116 8.18273760524705 >100 0.03719108240105066 1.817889106535831 >500 0.0029752865386619724 0.5615453852501877 >1k 9.917621795539908E-4 0.590654035067969 >5k 0.0 0.0 >10k+ 2.479405448884977E-4 3.121956597864124 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43437 3.0843745473239927 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4327 0.307251621112667 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1549 0.10999139383025679 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05240390487200098 0.0 2 0.0 0.0 0.0 0.1628923547105288 0.0 3 0.0 0.0 0.0 0.3157015732532742 0.0 4 0.0 0.0 0.0 0.47319731987400343 0.0 5 0.0 0.0 0.0 0.8528060941906934 0.0 6 0.0 0.0 0.0 1.597964058590122 0.0 7 0.0 0.0 0.0 2.135068579527541 0.0 8 0.0 0.0 0.0 3.073794355147938 0.0 9 0.0 0.0 0.0 3.703422301624947 0.0 10 0.0 0.0 0.0 4.396105353151193 0.0 11 0.0 0.0 0.0 4.886486609311137 0.0 12 0.0 0.0 0.0 5.279089847844055 0.0 13 0.0 0.0 0.0 5.474361851093382 0.0 14 0.0 0.0 0.0 5.587193564970901 0.0 15 0.0 0.0 0.0 5.688024926648735 0.0 16 0.0 0.0 0.0 5.845733697273008 0.0 17 0.0 0.0 0.0 6.032129700374639 0.0 18 0.0 0.0 0.0 6.313960457064302 0.0 19 0.0 0.0 0.0 6.453988235394364 0.0 20 0.0 0.0 0.0 6.604383181896936 0.0 21 0.0 0.0 0.0 6.763299088541297 0.0 22 0.0 0.0 0.0 6.938333811453875 0.0 23 0.0 0.0 0.0 7.135452022733921 0.0 24 0.0 0.0 0.0 7.289894425303843 0.0 25 0.0 0.0 0.0 7.416856731416496 0.0 26 0.0 0.0 0.0 7.544458109539783 0.0 27 0.0 0.0 0.0 7.6848409278757535 0.0 28 0.0 0.0 0.0 7.826714914236536 0.0 29 0.0 0.0 0.0 7.9840686448549025 0.0 30 0.0 0.0 0.0 8.215270696702104 0.0 31 0.0 0.0 0.0 8.381713451471711 0.0 32 0.0 0.0 0.0 8.547020078222413 0.0 33 0.0 0.0 0.0 8.712326704973117 0.0 34 0.0 0.0 0.0 8.885444211853791 0.0 35 0.0 0.0 0.0 9.084550647166923 0.0 36 0.0 0.0 0.0 9.25781017004996 0.0 37 0.0 0.0 0.0 9.433199932968447 0.0 38 0.0 0.0 0.0 9.63287443229103 0.0 39 0.0 0.0 0.0 9.892266660607318 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 55 1.8189894E-12 45.000004 4 TCGATAG 55 1.8189894E-12 45.000004 1 CGACGGT 145 0.0 45.0 28 TTTCGCG 20 7.0338283E-4 45.0 1 GCGTAAG 30 2.1658525E-6 44.999996 1 CGTTTTT 15630 0.0 43.87716 1 CGGTCTA 150 0.0 43.5 31 CTCACGA 155 0.0 42.09677 24 CTAACGG 55 6.184564E-11 40.909092 2 CGGTTTT 1605 0.0 40.79439 1 TCACGAC 160 0.0 40.78125 25 CACGACG 160 0.0 40.78125 26 CGGGATC 425 0.0 40.764706 6 TACGCGG 105 0.0 40.714287 2 GCGCGAC 305 0.0 40.573772 9 TAGGGCG 390 0.0 40.384617 5 AGGGCGC 185 0.0 40.135136 6 AATTCGC 45 1.9288564E-8 40.0 13 ACGGGAT 745 0.0 39.865772 5 CGAGGGA 745 0.0 39.865772 4 >>END_MODULE